RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 PHLDB2Q86SQ0 1253 aa22.15■■□□□ 1.14
C9orf3-208ENST00000451893 PNPLA1Q8N8W4 532 aa22.15■■□□□ 1.14
C9orf3-208ENST00000451893 OR52K2Q8NGK3 314 aa22.15■■□□□ 1.14
C9orf3-208ENST00000451893 FRS2Q8WU20 508 aa22.15■■□□□ 1.14
C9orf3-208ENST00000451893 H0Y8X5 98 aa22.14■■□□□ 1.13
C9orf3-208ENST00000451893 VILLO15195 856 aa22.14■■□□□ 1.13
C9orf3-208ENST00000451893 SLC7A4O43246 635 aa22.14■■□□□ 1.13
C9orf3-208ENST00000451893 AKR1B10O60218 316 aa22.14■■□□□ 1.13
C9orf3-208ENST00000451893 DESP17661 470 aa22.14■■□□□ 1.13
C9orf3-208ENST00000451893 EIF4A3P38919 411 aaKnown RBP22.14■■□□□ 1.13
C9orf3-208ENST00000451893 GRK6P43250 576 aa22.14■■□□□ 1.13
C9orf3-208ENST00000451893 C5orf22Q49AR2 442 aa22.14■■□□□ 1.13
C9orf3-208ENST00000451893 CCDC157Q569K6 752 aa22.14■■□□□ 1.13
C9orf3-208ENST00000451893 EMC1Q8N766 993 aa22.14■■□□□ 1.13
C9orf3-208ENST00000451893 DCAF4L2Q8NA75 395 aa22.14■■□□□ 1.13
C9orf3-208ENST00000451893 NT5C3BQ969T7 300 aa22.14■■□□□ 1.13
C9orf3-208ENST00000451893 C1orf74Q96LT6 269 aa22.14■■□□□ 1.13
C9orf3-208ENST00000451893 HAPLN3Q96S86 360 aa22.14■■□□□ 1.13
C9orf3-208ENST00000451893 SELENOOQ9BVL4 669 aa22.14■■□□□ 1.13
C9orf3-208ENST00000451893 ZYG11BQ9C0D3 744 aa22.14■■□□□ 1.13
C9orf3-208ENST00000451893 GDF3Q9NR23 364 aa22.14■■□□□ 1.13
C9orf3-208ENST00000451893 TMPRSS4Q9NRS4 437 aa22.14■■□□□ 1.13
C9orf3-208ENST00000451893 VPS51Q9UID3 782 aa22.14■■□□□ 1.13
C9orf3-208ENST00000451893 MSRB2Q9Y3D2 182 aa22.14■■□□□ 1.13
C9orf3-208ENST00000451893 KNL1Q8NG31 2342 aa22.13■■□□□ 1.13
C9orf3-208ENST00000451893 ANKRD62A6NC57 917 aa22.13■■□□□ 1.13
C9orf3-208ENST00000451893 CBX4O00257 560 aa22.13■■□□□ 1.13
C9orf3-208ENST00000451893 PLK4O00444 970 aa22.13■■□□□ 1.13
C9orf3-208ENST00000451893 KPNA3O00505 521 aaPredicted RBP22.13■■□□□ 1.13
C9orf3-208ENST00000451893 MCF2LO15068 1137 aa22.13■■□□□ 1.13
C9orf3-208ENST00000451893 SNAP91O60641 907 aa22.13■■□□□ 1.13
C9orf3-208ENST00000451893 RTN2O75298 545 aa22.13■■□□□ 1.13
C9orf3-208ENST00000451893 SRCP12931 536 aa22.13■■□□□ 1.13
C9orf3-208ENST00000451893 MAT2AP31153 395 aaKnown RBP22.13■■□□□ 1.13
C9orf3-208ENST00000451893 VASPP50552 380 aaPredicted RBP22.13■■□□□ 1.13
C9orf3-208ENST00000451893 ASTE1Q2TB18 679 aaPredicted RBP22.13■■□□□ 1.13
C9orf3-208ENST00000451893 TDRD12Q587J7 1177 aaKnown RBP22.13■■□□□ 1.13
C9orf3-208ENST00000451893 RETSATQ6NUM9 610 aa22.13■■□□□ 1.13
C9orf3-208ENST00000451893 RWDD4Q6NW29 188 aaKnown RBP22.13■■□□□ 1.13
C9orf3-208ENST00000451893 REXO1L1PQ8IX06 675 aa22.13■■□□□ 1.13
C9orf3-208ENST00000451893 SLC30A5Q8TAD4 765 aa22.13■■□□□ 1.13
C9orf3-208ENST00000451893 ZCCHC14Q8WYQ9 949 aaKnown RBP22.13■■□□□ 1.13
C9orf3-208ENST00000451893 ALG14Q96F25 216 aa22.13■■□□□ 1.13
C9orf3-208ENST00000451893 KDM4CQ9H3R0 1056 aa22.13■■□□□ 1.13
C9orf3-208ENST00000451893 ATP13A1Q9HD20 1204 aa22.13■■□□□ 1.13
C9orf3-208ENST00000451893 NOCTQ9UK39 431 aaKnown RBP22.13■■□□□ 1.13
C9orf3-208ENST00000451893 DOCK4Q8N1I0 1966 aa22.12■■□□□ 1.13
C9orf3-208ENST00000451893 EPG5Q9HCE0 2579 aa22.12■■□□□ 1.13
C9orf3-208ENST00000451893 MAGEC1O60732 1142 aa22.12■■□□□ 1.13
C9orf3-208ENST00000451893 PRNPP04156 253 aa22.12■■□□□ 1.13
C9orf3-208ENST00000451893 ITGAVP06756 1048 aa22.12■■□□□ 1.13
C9orf3-208ENST00000451893 RRM1P23921 792 aa22.12■■□□□ 1.13
C9orf3-208ENST00000451893 CTSKP43235 329 aa22.12■■□□□ 1.13
C9orf3-208ENST00000451893 ARRB1P49407 418 aaPredicted RBP22.12■■□□□ 1.13
C9orf3-208ENST00000451893 DNA2P51530 1060 aa22.12■■□□□ 1.13
C9orf3-208ENST00000451893 CLCN6P51797 869 aa22.12■■□□□ 1.13
C9orf3-208ENST00000451893 FMO1Q01740 532 aa22.12■■□□□ 1.13
C9orf3-208ENST00000451893 CNTN1Q12860 1018 aa22.12■■□□□ 1.13
C9orf3-208ENST00000451893 LINGO4Q6UY18 593 aa22.12■■□□□ 1.13
C9orf3-208ENST00000451893 C17orf53Q8N3J3 647 aaPredicted RBP22.12■■□□□ 1.13
C9orf3-208ENST00000451893 RXFP2Q8WXD0 754 aa22.12■■□□□ 1.13
C9orf3-208ENST00000451893 PPP1R16AQ96I34 528 aa22.12■■□□□ 1.13
C9orf3-208ENST00000451893 RRAGDQ9NQL2 400 aaPredicted RBP22.12■■□□□ 1.13
C9orf3-208ENST00000451893 ANLNQ9NQW6 1124 aa22.12■■□□□ 1.13
C9orf3-208ENST00000451893 TRMT1Q9NXH9 659 aaKnown RBP22.12■■□□□ 1.13
C9orf3-208ENST00000451893 ADAM22Q9P0K1 906 aa22.12■■□□□ 1.13
C9orf3-208ENST00000451893 FTSJ1Q9UET6 329 aa22.12■■□□□ 1.13
C9orf3-208ENST00000451893 TMEM59LQ9UK28 342 aa22.12■■□□□ 1.13
C9orf3-208ENST00000451893 ZMIZ1Q9ULJ6 1067 aa22.12■■□□□ 1.13
C9orf3-208ENST00000451893 WASF3Q9UPY6 502 aa22.12■■□□□ 1.13
C9orf3-208ENST00000451893 HS3ST2Q9Y278 367 aa22.12■■□□□ 1.13
C9orf3-208ENST00000451893 OR51B4Q9Y5P0 310 aa22.12■■□□□ 1.13
C9orf3-208ENST00000451893 CABIN1Q9Y6J0 2220 aa22.11■■□□□ 1.13
C9orf3-208ENST00000451893 DRGXA6NNA5 263 aa22.11■■□□□ 1.13
C9orf3-208ENST00000451893 YKT6O15498 198 aa22.11■■□□□ 1.13
C9orf3-208ENST00000451893 PLRG1O43660 514 aaKnown RBP22.11■■□□□ 1.13
C9orf3-208ENST00000451893 CYP1A1P04798 512 aaPredicted RBP22.11■■□□□ 1.13
C9orf3-208ENST00000451893 CALB1P05937 261 aa22.11■■□□□ 1.13
C9orf3-208ENST00000451893 MMP8P22894 467 aa22.11■■□□□ 1.13
C9orf3-208ENST00000451893 CHRNA3P32297 505 aa22.11■■□□□ 1.13
C9orf3-208ENST00000451893 DRD3P35462 400 aa22.11■■□□□ 1.13
C9orf3-208ENST00000451893 NUDT1P36639 197 aa22.11■■□□□ 1.13
C9orf3-208ENST00000451893 PPP2CBP62714 309 aa22.11■■□□□ 1.13
C9orf3-208ENST00000451893 PPP2CAP67775 309 aa22.11■■□□□ 1.13
C9orf3-208ENST00000451893 STAT4Q14765 748 aa22.11■■□□□ 1.13
C9orf3-208ENST00000451893 SETMARQ53H47 684 aaPredicted RBP22.11■■□□□ 1.13
C9orf3-208ENST00000451893 NAPEPLDQ6IQ20 393 aa22.11■■□□□ 1.13
C9orf3-208ENST00000451893 ARCQ7LC44 396 aa22.11■■□□□ 1.13
C9orf3-208ENST00000451893 RAB44Q7Z6P3 723 aaPredicted RBP22.11■■□□□ 1.13
C9orf3-208ENST00000451893 ZNF354CQ86Y25 554 aa22.11■■□□□ 1.13
C9orf3-208ENST00000451893 OR7D4Q8NG98 312 aa22.11■■□□□ 1.13
C9orf3-208ENST00000451893 GRIN3AQ8TCU5 1115 aa22.11■■□□□ 1.13
C9orf3-208ENST00000451893 ADAMTS14Q8WXS8 1223 aa22.11■■□□□ 1.13
C9orf3-208ENST00000451893 ELF4Q99607 663 aaPredicted RBP22.11■■□□□ 1.13
C9orf3-208ENST00000451893 HAUS4Q9H6D7 363 aa22.11■■□□□ 1.13
C9orf3-208ENST00000451893 SARDHQ9UL12 918 aa22.11■■□□□ 1.13
C9orf3-208ENST00000451893 PPM1HQ9ULR3 514 aa22.11■■□□□ 1.13
C9orf3-208ENST00000451893 A0A0D9SEW6 157 aa22.1■■□□□ 1.13
C9orf3-208ENST00000451893 ILVBLA1L0T0 632 aa22.1■■□□□ 1.13
C9orf3-208ENST00000451893 CBFA2T3O75081 653 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms