RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 SLC22A2O15244 555 aa8.75□□□□□ -1.01
LSM5-208ENST00000450169 ACOX3O15254 700 aa8.75□□□□□ -1.01
LSM5-208ENST00000450169 PAPSS1O43252 624 aaPredicted RBP8.75□□□□□ -1.01
LSM5-208ENST00000450169 CST8O60676 142 aa8.75□□□□□ -1.01
LSM5-208ENST00000450169 TMCC2O75069 709 aa8.75□□□□□ -1.01
LSM5-208ENST00000450169 TIPRLO75663 272 aa8.75□□□□□ -1.01
LSM5-208ENST00000450169 IL18RAPO95256 599 aa8.75□□□□□ -1.01
LSM5-208ENST00000450169 CLIC3O95833 236 aa8.75□□□□□ -1.01
LSM5-208ENST00000450169 AMHP03971 560 aa8.75□□□□□ -1.01
LSM5-208ENST00000450169 MBL2P11226 248 aaPredicted RBP8.75□□□□□ -1.01
LSM5-208ENST00000450169 ITIH1P19827 911 aa8.75□□□□□ -1.01
LSM5-208ENST00000450169 SLC16A2P36021 539 aa8.75□□□□□ -1.01
LSM5-208ENST00000450169 HLCSP50747 726 aa8.75□□□□□ -1.01
LSM5-208ENST00000450169 RPL7AP62424 266 aaKnown RBP8.75□□□□□ -1.01
LSM5-208ENST00000450169 CDC20Q12834 499 aa8.75□□□□□ -1.01
LSM5-208ENST00000450169 ITPK1Q13572 414 aa8.75□□□□□ -1.01
LSM5-208ENST00000450169 KCNJ11Q14654 390 aa8.75□□□□□ -1.01
LSM5-208ENST00000450169 DLG2Q15700 870 aa8.75□□□□□ -1.01
LSM5-208ENST00000450169 MAPK11Q15759 364 aa8.75□□□□□ -1.01
LSM5-208ENST00000450169 FXNQ16595 210 aa8.75□□□□□ -1.01
LSM5-208ENST00000450169 TIFABQ6ZNK6 161 aa8.75□□□□□ -1.01
LSM5-208ENST00000450169 C16orf86Q6ZW13 317 aa8.75□□□□□ -1.01
LSM5-208ENST00000450169 PIWIL3Q7Z3Z3 882 aaKnown RBP8.75□□□□□ -1.01
LSM5-208ENST00000450169 MAPKAPK5Q8IW41 473 aa8.75□□□□□ -1.01
LSM5-208ENST00000450169 OFCC1Q8IZS5 231 aa8.75□□□□□ -1.01
LSM5-208ENST00000450169 ZCCHC7Q8N3Z6 543 aaKnown RBP8.75□□□□□ -1.01
LSM5-208ENST00000450169 TAS1R2Q8TE23 839 aa8.75□□□□□ -1.01
LSM5-208ENST00000450169 ZFP90Q8TF47 636 aa8.75□□□□□ -1.01
LSM5-208ENST00000450169 SEPT8Q92599 483 aa8.75□□□□□ -1.01
LSM5-208ENST00000450169 FBXL20Q96IG2 436 aa8.75□□□□□ -1.01
LSM5-208ENST00000450169 VCPIP1Q96JH7 1222 aa8.75□□□□□ -1.01
LSM5-208ENST00000450169 C8orf37Q96NL8 207 aa8.75□□□□□ -1.01
LSM5-208ENST00000450169 EMILIN2Q9BXX0 1053 aa8.75□□□□□ -1.01
LSM5-208ENST00000450169 MUC3BQ9H195 1237 aa8.75□□□□□ -1.01
LSM5-208ENST00000450169 GLT8D2Q9H1C3 349 aa8.75□□□□□ -1.01
LSM5-208ENST00000450169 PLAC1Q9HBJ0 212 aa8.75□□□□□ -1.01
LSM5-208ENST00000450169 SLC38A10Q9HBR0 1119 aa8.75□□□□□ -1.01
LSM5-208ENST00000450169 CD320Q9NPF0 282 aa8.75□□□□□ -1.01
LSM5-208ENST00000450169 MTRRQ9UBK8 725 aa8.75□□□□□ -1.01
LSM5-208ENST00000450169 PCDHB12Q9Y5F1 795 aa8.75□□□□□ -1.01
LSM5-208ENST00000450169 TCRBV3S1A0A5B6 114 aa8.74□□□□□ -1.01
LSM5-208ENST00000450169 FAM86B1E9PN63 330 aa8.74□□□□□ -1.01
LSM5-208ENST00000450169 F8VP50 259 aa8.74□□□□□ -1.01
LSM5-208ENST00000450169 RNF103O00237 685 aa8.74□□□□□ -1.01
LSM5-208ENST00000450169 PIK3R2O00459 728 aa8.74□□□□□ -1.01
LSM5-208ENST00000450169 VWA5AO00534 786 aa8.74□□□□□ -1.01
LSM5-208ENST00000450169 PHGDHO43175 533 aaKnown RBP8.74□□□□□ -1.01
LSM5-208ENST00000450169 RFPL2O75678 378 aa8.74□□□□□ -1.01
LSM5-208ENST00000450169 HSPA4LO95757 839 aa8.74□□□□□ -1.01
LSM5-208ENST00000450169 ADRB2P07550 413 aa8.74□□□□□ -1.01
LSM5-208ENST00000450169 FAM86B2P0C5J1 330 aa8.74□□□□□ -1.01
LSM5-208ENST00000450169 TMEM191BP0C7N4 346 aa8.74□□□□□ -1.01
LSM5-208ENST00000450169 SNHG28P0DPA3 235 aa8.74□□□□□ -1.01
LSM5-208ENST00000450169 JUNBP17275 347 aaPredicted RBP8.74□□□□□ -1.01
LSM5-208ENST00000450169 DDX5P17844 614 aaKnown RBP8.74□□□□□ -1.01
LSM5-208ENST00000450169 KLRK1P26718 216 aa8.74□□□□□ -1.01
LSM5-208ENST00000450169 POLR2IP36954 125 aaKnown RBP8.74□□□□□ -1.01
LSM5-208ENST00000450169 YAP1P46937 504 aaKnown RBP8.74□□□□□ -1.01
LSM5-208ENST00000450169 NOVP48745 357 aa8.74□□□□□ -1.01
LSM5-208ENST00000450169 NRLP54845 237 aa8.74□□□□□ -1.01
LSM5-208ENST00000450169 ZNF252P-AS1Q0IIN9 211 aa8.74□□□□□ -1.01
LSM5-208ENST00000450169 CRY1Q16526 586 aa8.74□□□□□ -1.01
LSM5-208ENST00000450169 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.74□□□□□ -1.01
LSM5-208ENST00000450169 INTS11Q5TA45 600 aaKnown RBP8.74□□□□□ -1.01
LSM5-208ENST00000450169 WDR78Q5VTH9 848 aa8.74□□□□□ -1.01
LSM5-208ENST00000450169 ZNF773Q6PK81 442 aa8.74□□□□□ -1.01
LSM5-208ENST00000450169 C12orf56Q8IXR9 622 aa8.74□□□□□ -1.01
LSM5-208ENST00000450169 ELMOD2Q8IZ81 293 aa8.74□□□□□ -1.01
LSM5-208ENST00000450169 FBXL13Q8NEE6 735 aa8.74□□□□□ -1.01
LSM5-208ENST00000450169 CMASQ8NFW8 434 aaPredicted RBP8.74□□□□□ -1.01
LSM5-208ENST00000450169 VPS33AQ96AX1 596 aa8.74□□□□□ -1.01
LSM5-208ENST00000450169 DUS3LQ96G46 650 aaKnown RBP8.74□□□□□ -1.01
LSM5-208ENST00000450169 IL12RB2Q99665 862 aa8.74□□□□□ -1.01
LSM5-208ENST00000450169 COQ7Q99807 217 aa8.74□□□□□ -1.01
LSM5-208ENST00000450169 TMEM206Q9H813 350 aa8.74□□□□□ -1.01
LSM5-208ENST00000450169 SP140LQ9H930 580 aa8.74□□□□□ -1.01
LSM5-208ENST00000450169 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.74□□□□□ -1.01
LSM5-208ENST00000450169 MAGEE1Q9HCI5 957 aa8.74□□□□□ -1.01
LSM5-208ENST00000450169 MRPL40Q9NQ50 206 aaKnown RBP8.74□□□□□ -1.01
LSM5-208ENST00000450169 GPRC5CQ9NQ84 441 aa8.74□□□□□ -1.01
LSM5-208ENST00000450169 CCDC177Q9NQR7 707 aaPredicted RBP8.74□□□□□ -1.01
LSM5-208ENST00000450169 PKD2L2Q9NZM6 624 aa8.74□□□□□ -1.01
LSM5-208ENST00000450169 JAG2Q9Y219 1238 aa8.74□□□□□ -1.01
LSM5-208ENST00000450169 COQ4Q9Y3A0 265 aa8.74□□□□□ -1.01
LSM5-208ENST00000450169 NAV1Q8NEY1 1877 aa8.74□□□□□ -1.01
LSM5-208ENST00000450169 COL4A1P02462 1669 aa8.74□□□□□ -1.01
LSM5-208ENST00000450169 LRRIQ4A6NIV6 560 aa8.74□□□□□ -1.01
LSM5-208ENST00000450169 NEMP1O14524 444 aa8.74□□□□□ -1.01
LSM5-208ENST00000450169 CHADO15335 359 aa8.74□□□□□ -1.01
LSM5-208ENST00000450169 MSH4O15457 936 aa8.74□□□□□ -1.01
LSM5-208ENST00000450169 DDHD2O94830 711 aa8.74□□□□□ -1.01
LSM5-208ENST00000450169 FKBP9O95302 570 aa8.74□□□□□ -1.01
LSM5-208ENST00000450169 NOMO3P69849 1222 aa8.74□□□□□ -1.01
LSM5-208ENST00000450169 PPP2R2BQ00005 443 aa8.74□□□□□ -1.01
LSM5-208ENST00000450169 GCNT1Q02742 428 aa8.74□□□□□ -1.01
LSM5-208ENST00000450169 ZNF543Q08ER8 600 aa8.74□□□□□ -1.01
LSM5-208ENST00000450169 NFE2Q16621 373 aaPredicted RBP8.74□□□□□ -1.01
LSM5-208ENST00000450169 C15orf59Q2T9L4 293 aaPredicted RBP8.74□□□□□ -1.01
LSM5-208ENST00000450169 SMU1Q2TAY7 513 aa8.74□□□□□ -1.01
LSM5-208ENST00000450169 GTF2IRD2BQ6EKJ0 949 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms