RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 SLC12A1Q13621 1099 aa12.9□□□□□ -0.34
AC004540.1-204ENST00000449537 TMEM259Q4ZIN3 620 aa12.9□□□□□ -0.34
AC004540.1-204ENST00000449537 DCAF6Q58WW2 860 aa12.9□□□□□ -0.34
AC004540.1-204ENST00000449537 MS4A13Q5J8X5 152 aa12.9□□□□□ -0.34
AC004540.1-204ENST00000449537 SV2AQ7L0J3 742 aa12.9□□□□□ -0.34
AC004540.1-204ENST00000449537 BHLHA9Q7RTU4 235 aa12.9□□□□□ -0.34
AC004540.1-204ENST00000449537 ARL10Q8N8L6 244 aa12.9□□□□□ -0.34
AC004540.1-204ENST00000449537 ZNF507Q8TCN5 953 aa12.9□□□□□ -0.34
AC004540.1-204ENST00000449537 PLEKHO2Q8TD55 490 aa12.9□□□□□ -0.34
AC004540.1-204ENST00000449537 PARD3BQ8TEW8 1205 aa12.9□□□□□ -0.34
AC004540.1-204ENST00000449537 FEM1CQ96JP0 617 aa12.9□□□□□ -0.34
AC004540.1-204ENST00000449537 SLC13A1Q9BZW2 595 aa12.9□□□□□ -0.34
AC004540.1-204ENST00000449537 TCEAL2Q9H3H9 227 aaPredicted RBP12.9□□□□□ -0.34
AC004540.1-204ENST00000449537 LRRC4Q9HBW1 653 aa12.9□□□□□ -0.34
AC004540.1-204ENST00000449537 DYRK4Q9NR20 520 aa12.9□□□□□ -0.34
AC004540.1-204ENST00000449537 TP53TG5Q9Y2B4 290 aa12.9□□□□□ -0.34
AC004540.1-204ENST00000449537 FARP1Q9Y4F1 1045 aaPredicted RBP12.9□□□□□ -0.34
AC004540.1-204ENST00000449537 SDK2Q58EX2 2172 aa12.89□□□□□ -0.35
AC004540.1-204ENST00000449537 LRRIQ3A6PVS8 624 aaPredicted RBP12.89□□□□□ -0.35
AC004540.1-204ENST00000449537 KPNA3O00505 521 aaPredicted RBP12.89□□□□□ -0.35
AC004540.1-204ENST00000449537 FPGTO14772 594 aa12.89□□□□□ -0.35
AC004540.1-204ENST00000449537 RAD51BO15315 384 aa12.89□□□□□ -0.35
AC004540.1-204ENST00000449537 ATP9BO43861 1147 aa12.89□□□□□ -0.35
AC004540.1-204ENST00000449537 BNIP3LO60238 219 aa12.89□□□□□ -0.35
AC004540.1-204ENST00000449537 EXOC3O60645 756 aa12.89□□□□□ -0.35
AC004540.1-204ENST00000449537 ASS1P00966 412 aaKnown RBP12.89□□□□□ -0.35
AC004540.1-204ENST00000449537 PRKAR1AP10644 381 aa12.89□□□□□ -0.35
AC004540.1-204ENST00000449537 TSHRP16473 764 aa12.89□□□□□ -0.35
AC004540.1-204ENST00000449537 CD58P19256 250 aa12.89□□□□□ -0.35
AC004540.1-204ENST00000449537 RECQLP46063 649 aaPredicted RBP12.89□□□□□ -0.35
AC004540.1-204ENST00000449537 TBX4P57082 545 aa12.89□□□□□ -0.35
AC004540.1-204ENST00000449537 RPS21P63220 83 aaKnown RBP12.89□□□□□ -0.35
AC004540.1-204ENST00000449537 DLG2Q15700 870 aa12.89□□□□□ -0.35
AC004540.1-204ENST00000449537 FAXCQ5TGI0 409 aa12.89□□□□□ -0.35
AC004540.1-204ENST00000449537 BRAPQ7Z569 592 aa12.89□□□□□ -0.35
AC004540.1-204ENST00000449537 ZC3H18Q86VM9 953 aaKnown RBP12.89□□□□□ -0.35
AC004540.1-204ENST00000449537 PHACTR4Q8IZ21 702 aa12.89□□□□□ -0.35
AC004540.1-204ENST00000449537 Q8N9G6 341 aaPredicted RBP12.89□□□□□ -0.35
AC004540.1-204ENST00000449537 OR6C4Q8NGE1 309 aa12.89□□□□□ -0.35
AC004540.1-204ENST00000449537 ERCC4Q92889 916 aaPredicted RBP12.89□□□□□ -0.35
AC004540.1-204ENST00000449537 SLC45A3Q96JT2 553 aa12.89□□□□□ -0.35
AC004540.1-204ENST00000449537 TBATAQ96M53 351 aa12.89□□□□□ -0.35
AC004540.1-204ENST00000449537 CLPBQ9H078 707 aa12.89□□□□□ -0.35
AC004540.1-204ENST00000449537 SIRPGQ9P1W8 387 aa12.89□□□□□ -0.35
AC004540.1-204ENST00000449537 DKK3Q9UBP4 350 aa12.89□□□□□ -0.35
AC004540.1-204ENST00000449537 ATP6V1DQ9Y5K8 247 aa12.89□□□□□ -0.35
AC004540.1-204ENST00000449537 RNF215Q9Y6U7 377 aa12.89□□□□□ -0.35
AC004540.1-204ENST00000449537 OTOGQ6ZRI0 2925 aa12.89□□□□□ -0.35
AC004540.1-204ENST00000449537 YJEFN3A6XGL0 299 aa12.88□□□□□ -0.35
AC004540.1-204ENST00000449537 E7ENQ6 273 aa12.88□□□□□ -0.35
AC004540.1-204ENST00000449537 M0QYT0 321 aa12.88□□□□□ -0.35
AC004540.1-204ENST00000449537 SYT1P21579 422 aa12.88□□□□□ -0.35
AC004540.1-204ENST00000449537 UGT1A3P35503 534 aa12.88□□□□□ -0.35
AC004540.1-204ENST00000449537 VASPP50552 380 aaPredicted RBP12.88□□□□□ -0.35
AC004540.1-204ENST00000449537 PLK1P53350 603 aa12.88□□□□□ -0.35
AC004540.1-204ENST00000449537 SGCGQ13326 291 aa12.88□□□□□ -0.35
AC004540.1-204ENST00000449537 PTK2BQ14289 1009 aa12.88□□□□□ -0.35
AC004540.1-204ENST00000449537 DEFB109BQ30KR1 87 aa12.88□□□□□ -0.35
AC004540.1-204ENST00000449537 ZACNQ401N2 412 aa12.88□□□□□ -0.35
AC004540.1-204ENST00000449537 ZNF394Q53GI3 561 aa12.88□□□□□ -0.35
AC004540.1-204ENST00000449537 TPRG1LQ5T0D9 272 aa12.88□□□□□ -0.35
AC004540.1-204ENST00000449537 PHF19Q5T6S3 580 aa12.88□□□□□ -0.35
AC004540.1-204ENST00000449537 MSANTD2Q6P1R3 559 aa12.88□□□□□ -0.35
AC004540.1-204ENST00000449537 LVRNQ6Q4G3 990 aa12.88□□□□□ -0.35
AC004540.1-204ENST00000449537 Q6ZVU0 165 aa12.88□□□□□ -0.35
AC004540.1-204ENST00000449537 ERN2Q76MJ5 926 aaKnown RBP12.88□□□□□ -0.35
AC004540.1-204ENST00000449537 CCNJLQ8IV13 435 aa12.88□□□□□ -0.35
AC004540.1-204ENST00000449537 CACNA2D3Q8IZS8 1091 aa12.88□□□□□ -0.35
AC004540.1-204ENST00000449537 ANKRD52Q8NB46 1076 aa12.88□□□□□ -0.35
AC004540.1-204ENST00000449537 KYQ8NBH2 561 aa12.88□□□□□ -0.35
AC004540.1-204ENST00000449537 CPT1CQ8TCG5 803 aa12.88□□□□□ -0.35
AC004540.1-204ENST00000449537 RNF34Q969K3 372 aa12.88□□□□□ -0.35
AC004540.1-204ENST00000449537 TAAR9Q96RI9 348 aa12.88□□□□□ -0.35
AC004540.1-204ENST00000449537 HAPLN3Q96S86 360 aa12.88□□□□□ -0.35
AC004540.1-204ENST00000449537 LRRC61Q9BV99 259 aa12.88□□□□□ -0.35
AC004540.1-204ENST00000449537 NUCKS1Q9H1E3 243 aaKnown RBP12.88□□□□□ -0.35
AC004540.1-204ENST00000449537 ZSCAN16Q9H4T2 348 aaPredicted RBP12.88□□□□□ -0.35
AC004540.1-204ENST00000449537 GGT7Q9UJ14 662 aa12.88□□□□□ -0.35
AC004540.1-204ENST00000449537 SLC25A13Q9UJS0 675 aa12.88□□□□□ -0.35
AC004540.1-204ENST00000449537 CCL4P13236 92 aa12.87□□□□□ -0.35
AC004540.1-204ENST00000449537 PDGFRAP16234 1089 aa12.87□□□□□ -0.35
AC004540.1-204ENST00000449537 NR1D1P20393 614 aa12.87□□□□□ -0.35
AC004540.1-204ENST00000449537 CHRNA3P32297 505 aa12.87□□□□□ -0.35
AC004540.1-204ENST00000449537 TXLNAP40222 546 aa12.87□□□□□ -0.35
AC004540.1-204ENST00000449537 THOP1P52888 689 aa12.87□□□□□ -0.35
AC004540.1-204ENST00000449537 EIF2S3LQ2VIR3 472 aaKnown RBP12.87□□□□□ -0.35
AC004540.1-204ENST00000449537 KIAA1161Q6NSJ0 714 aa12.87□□□□□ -0.35
AC004540.1-204ENST00000449537 TCTN3Q6NUS6 607 aa12.87□□□□□ -0.35
AC004540.1-204ENST00000449537 ASB18Q6ZVZ8 466 aa12.87□□□□□ -0.35
AC004540.1-204ENST00000449537 EPM2AIP1Q7L775 607 aaPredicted RBP12.87□□□□□ -0.35
AC004540.1-204ENST00000449537 TMPRSS9Q7Z410 1059 aa12.87□□□□□ -0.35
AC004540.1-204ENST00000449537 NELFCDQ8IXH7 590 aa12.87□□□□□ -0.35
AC004540.1-204ENST00000449537 LGI2Q8N0V4 545 aa12.87□□□□□ -0.35
AC004540.1-204ENST00000449537 SLC34A3Q8N130 599 aa12.87□□□□□ -0.35
AC004540.1-204ENST00000449537 TMIEQ8NEW7 156 aa12.87□□□□□ -0.35
AC004540.1-204ENST00000449537 LENG8Q96PV6 779 aaPredicted RBP12.87□□□□□ -0.35
AC004540.1-204ENST00000449537 PPP1R9BQ96SB3 815 aa12.87□□□□□ -0.35
AC004540.1-204ENST00000449537 NAALADL1Q9UQQ1 740 aa12.87□□□□□ -0.35
AC004540.1-204ENST00000449537 K7EM74 188 aa12.86□□□□□ -0.35
AC004540.1-204ENST00000449537 DUX1O43812 170 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms