RNA–Protein interactions for RNA: ENST00000448872.6

RCL1-208, Transcript of RNA terminal phosphate cyclase like 1, humanhuman

TSL 1 (best) BASIC

Gene RCL1, Length 1,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1-208ENST00000448872 BDP1A6H8Y1 2624 aa12.08□□□□□ -0.48
RCL1-208ENST00000448872 PPP1R12AO14974 1030 aaPredicted RBP12.07□□□□□ -0.48
RCL1-208ENST00000448872 MATN3O15232 486 aa12.07□□□□□ -0.48
RCL1-208ENST00000448872 NCAM2O15394 837 aa12.07□□□□□ -0.48
RCL1-208ENST00000448872 ATP9BO43861 1147 aa12.07□□□□□ -0.48
RCL1-208ENST00000448872 BNIP3LO60238 219 aa12.07□□□□□ -0.48
RCL1-208ENST00000448872 ZNF500O60304 480 aaPredicted RBP12.07□□□□□ -0.48
RCL1-208ENST00000448872 URI1O94763 535 aaPredicted RBP12.07□□□□□ -0.48
RCL1-208ENST00000448872 SRPRAP08240 638 aaKnown RBP12.07□□□□□ -0.48
RCL1-208ENST00000448872 RBP3P10745 1247 aa12.07□□□□□ -0.48
RCL1-208ENST00000448872 COL9A1P20849 921 aa12.07□□□□□ -0.48
RCL1-208ENST00000448872 CCNCP24863 283 aa12.07□□□□□ -0.48
RCL1-208ENST00000448872 RGRP47804 291 aa12.07□□□□□ -0.48
RCL1-208ENST00000448872 ST8SIA6P61647 398 aa12.07□□□□□ -0.48
RCL1-208ENST00000448872 ENPP2Q13822 863 aa12.07□□□□□ -0.48
RCL1-208ENST00000448872 LRRC32Q14392 662 aa12.07□□□□□ -0.48
RCL1-208ENST00000448872 LBRQ14739 615 aaKnown RBP12.07□□□□□ -0.48
RCL1-208ENST00000448872 FBXO43Q4G163 708 aa12.07□□□□□ -0.48
RCL1-208ENST00000448872 SLC45A4Q5BKX6 768 aa12.07□□□□□ -0.48
RCL1-208ENST00000448872 ATXN7L2Q5T6C5 722 aaPredicted RBP12.07□□□□□ -0.48
RCL1-208ENST00000448872 C22orf39Q6P5X5 142 aa12.07□□□□□ -0.48
RCL1-208ENST00000448872 Q6ZVU0 165 aa12.07□□□□□ -0.48
RCL1-208ENST00000448872 PGBD5Q8N414 524 aa12.07□□□□□ -0.48
RCL1-208ENST00000448872 CLDN23Q96B33 292 aa12.07□□□□□ -0.48
RCL1-208ENST00000448872 TM6SF2Q9BZW4 377 aa12.07□□□□□ -0.48
RCL1-208ENST00000448872 RNF103O00237 685 aa12.06□□□□□ -0.48
RCL1-208ENST00000448872 KRIT1O00522 736 aa12.06□□□□□ -0.48
RCL1-208ENST00000448872 MCF2LO15068 1137 aa12.06□□□□□ -0.48
RCL1-208ENST00000448872 JCHAINP01591 159 aa12.06□□□□□ -0.48
RCL1-208ENST00000448872 EPHX1P07099 455 aa12.06□□□□□ -0.48
RCL1-208ENST00000448872 CCNB1P14635 433 aa12.06□□□□□ -0.48
RCL1-208ENST00000448872 NTSR1P30989 418 aa12.06□□□□□ -0.48
RCL1-208ENST00000448872 GKP32189 559 aa12.06□□□□□ -0.48
RCL1-208ENST00000448872 KCNJ1P48048 391 aa12.06□□□□□ -0.48
RCL1-208ENST00000448872 GDF10P55107 478 aa12.06□□□□□ -0.48
RCL1-208ENST00000448872 MAXP61244 160 aa12.06□□□□□ -0.48
RCL1-208ENST00000448872 MRPS21P82921 87 aaKnown RBP12.06□□□□□ -0.48
RCL1-208ENST00000448872 WASHC5Q12768 1159 aa12.06□□□□□ -0.48
RCL1-208ENST00000448872 MTAPQ13126 283 aa12.06□□□□□ -0.48
RCL1-208ENST00000448872 XRCC4Q13426 336 aa12.06□□□□□ -0.48
RCL1-208ENST00000448872 TMCO4Q5TGY1 634 aa12.06□□□□□ -0.48
RCL1-208ENST00000448872 TTC27Q6P3X3 843 aa12.06□□□□□ -0.48
RCL1-208ENST00000448872 DARS2Q6PI48 645 aaKnown RBP12.06□□□□□ -0.48
RCL1-208ENST00000448872 BZW1Q7L1Q6 419 aaKnown RBP12.06□□□□□ -0.48
RCL1-208ENST00000448872 PRUNE1Q86TP1 453 aa12.06□□□□□ -0.48
RCL1-208ENST00000448872 LRRC49Q8IUZ0 686 aa12.06□□□□□ -0.48
RCL1-208ENST00000448872 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.06□□□□□ -0.48
RCL1-208ENST00000448872 CNTD1Q8N815 330 aa12.06□□□□□ -0.48
RCL1-208ENST00000448872 FAM71DQ8N9W8 422 aa12.06□□□□□ -0.48
RCL1-208ENST00000448872 TTC13Q8NBP0 860 aa12.06□□□□□ -0.48
RCL1-208ENST00000448872 TSEN2Q8NCE0 465 aaKnown RBP12.06□□□□□ -0.48
RCL1-208ENST00000448872 OR6K2Q8NGY2 324 aa12.06□□□□□ -0.48
RCL1-208ENST00000448872 MAML1Q92585 1016 aa12.06□□□□□ -0.48
RCL1-208ENST00000448872 PTPRN2Q92932 1015 aa12.06□□□□□ -0.48
RCL1-208ENST00000448872 PBXIP1Q96AQ6 731 aa12.06□□□□□ -0.48
RCL1-208ENST00000448872 GABRG3Q99928 467 aa12.06□□□□□ -0.48
RCL1-208ENST00000448872 TMEM121Q9BTD3 319 aa12.06□□□□□ -0.48
RCL1-208ENST00000448872 OSBPL6Q9BZF3 934 aa12.06□□□□□ -0.48
RCL1-208ENST00000448872 USP29Q9HBJ7 922 aa12.06□□□□□ -0.48
RCL1-208ENST00000448872 C11orf16Q9NQ32 467 aa12.06□□□□□ -0.48
RCL1-208ENST00000448872 DLGAP2Q9P1A6 1054 aa12.06□□□□□ -0.48
RCL1-208ENST00000448872 LHX3Q9UBR4 397 aa12.06□□□□□ -0.48
RCL1-208ENST00000448872 TTC28Q96AY4 2481 aa12.05□□□□□ -0.48
RCL1-208ENST00000448872 A0A1W2PQF6 199 aa12.05□□□□□ -0.48
RCL1-208ENST00000448872 ZSCAN5CA6NGD5 496 aaPredicted RBP12.05□□□□□ -0.48
RCL1-208ENST00000448872 HACD1B0YJ81 288 aa12.05□□□□□ -0.48
RCL1-208ENST00000448872 F5H423 210 aaPredicted RBP12.05□□□□□ -0.48
RCL1-208ENST00000448872 KIF2AO00139 706 aaPredicted RBP12.05□□□□□ -0.48
RCL1-208ENST00000448872 INSIG1O15503 277 aa12.05□□□□□ -0.48
RCL1-208ENST00000448872 KCNN4O15554 427 aa12.05□□□□□ -0.48
RCL1-208ENST00000448872 SIN3BO75182 1162 aa12.05□□□□□ -0.48
RCL1-208ENST00000448872 HLA-DQB2P05538 268 aa12.05□□□□□ -0.48
RCL1-208ENST00000448872 AOC1P19801 751 aa12.05□□□□□ -0.48
RCL1-208ENST00000448872 PTPN3P26045 913 aa12.05□□□□□ -0.48
RCL1-208ENST00000448872 MMP13P45452 471 aa12.05□□□□□ -0.48
RCL1-208ENST00000448872 SLC20A2Q08357 652 aa12.05□□□□□ -0.48
RCL1-208ENST00000448872 BYSLQ13895 437 aaKnown RBP12.05□□□□□ -0.48
RCL1-208ENST00000448872 OASLQ15646 514 aaKnown RBP12.05□□□□□ -0.48
RCL1-208ENST00000448872 CCNG2Q16589 344 aa12.05□□□□□ -0.48
RCL1-208ENST00000448872 HNRNPA1L2Q32P51 320 aaKnown RBP12.05□□□□□ -0.48
RCL1-208ENST00000448872 INO80DQ53TQ3 878 aaPredicted RBP12.05□□□□□ -0.48
RCL1-208ENST00000448872 C9orf64Q5T6V5 341 aa12.05□□□□□ -0.48
RCL1-208ENST00000448872 MARC1Q5VT66 337 aa12.05□□□□□ -0.48
RCL1-208ENST00000448872 TIGD7Q6NT04 549 aaPredicted RBP12.05□□□□□ -0.48
RCL1-208ENST00000448872 TMEM92Q6UXU6 159 aa12.05□□□□□ -0.48
RCL1-208ENST00000448872 CDKL3Q8IVW4 592 aaPredicted RBP12.05□□□□□ -0.48
RCL1-208ENST00000448872 SYNPOQ8N3V7 929 aa12.05□□□□□ -0.48
RCL1-208ENST00000448872 TEX26Q8N6G2 289 aa12.05□□□□□ -0.48
RCL1-208ENST00000448872 TMEM105Q8N8V8 129 aa12.05□□□□□ -0.48
RCL1-208ENST00000448872 CHST14Q8NCH0 376 aa12.05□□□□□ -0.48
RCL1-208ENST00000448872 OR2A12Q8NGT7 310 aa12.05□□□□□ -0.48
RCL1-208ENST00000448872 KCNV2Q8TDN2 545 aa12.05□□□□□ -0.48
RCL1-208ENST00000448872 HTR3CQ8WXA8 447 aa12.05□□□□□ -0.48
RCL1-208ENST00000448872 NKD2Q969F2 451 aaPredicted RBP12.05□□□□□ -0.48
RCL1-208ENST00000448872 VOPP1Q96AW1 172 aa12.05□□□□□ -0.48
RCL1-208ENST00000448872 NSMCE3Q96MG7 304 aa12.05□□□□□ -0.48
RCL1-208ENST00000448872 ZNF599Q96NL3 588 aa12.05□□□□□ -0.48
RCL1-208ENST00000448872 AGAP3Q96P47 875 aa12.05□□□□□ -0.48
RCL1-208ENST00000448872 CINPQ9BW66 212 aaPredicted RBP12.05□□□□□ -0.48
RCL1-208ENST00000448872 SLC6A17Q9H1V8 727 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms