RNA–Protein interactions for RNA: ENST00000448301.6

CTSS-202, Transcript of cathepsin S, humanhuman

TSL 2 BASIC

Gene CTSS, Length 1,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSS-202ENST00000448301 OSBPL9Q96SU4 736 aa14.3□□□□□ -0.12
CTSS-202ENST00000448301 SAE1Q9UBE0 346 aaPredicted RBP14.3□□□□□ -0.12
CTSS-202ENST00000448301 FARP1Q9Y4F1 1045 aaPredicted RBP14.3□□□□□ -0.12
CTSS-202ENST00000448301 ACTL7AQ9Y615 435 aa14.3□□□□□ -0.12
CTSS-202ENST00000448301 ANKRD36A6QL64 1941 aa14.29□□□□□ -0.12
CTSS-202ENST00000448301 A0A1W2PQF6 199 aa14.29□□□□□ -0.12
CTSS-202ENST00000448301 K7ERQ8 282 aa14.29□□□□□ -0.12
CTSS-202ENST00000448301 FANCGO15287 622 aa14.29□□□□□ -0.12
CTSS-202ENST00000448301 CEP104O60308 925 aa14.29□□□□□ -0.12
CTSS-202ENST00000448301 TMCC1O94876 653 aa14.29□□□□□ -0.12
CTSS-202ENST00000448301 PAPSS2O95340 614 aaPredicted RBP14.29□□□□□ -0.12
CTSS-202ENST00000448301 PEX11BO96011 259 aa14.29□□□□□ -0.12
CTSS-202ENST00000448301 PRLRP16471 622 aa14.29□□□□□ -0.12
CTSS-202ENST00000448301 TCP1P17987 556 aaKnown RBP14.29□□□□□ -0.12
CTSS-202ENST00000448301 AVPR2P30518 371 aa14.29□□□□□ -0.12
CTSS-202ENST00000448301 OTUD4Q01804 1114 aaKnown RBP14.29□□□□□ -0.12
CTSS-202ENST00000448301 XRCC4Q13426 336 aa14.29□□□□□ -0.12
CTSS-202ENST00000448301 CAMK2GQ13555 558 aaPredicted RBP14.29□□□□□ -0.12
CTSS-202ENST00000448301 STARD3Q14849 445 aa14.29□□□□□ -0.12
CTSS-202ENST00000448301 ACCSLQ4AC99 568 aa14.29□□□□□ -0.12
CTSS-202ENST00000448301 TMCO4Q5TGY1 634 aa14.29□□□□□ -0.12
CTSS-202ENST00000448301 PAPD7Q5XG87 772 aaKnown RBP14.29□□□□□ -0.12
CTSS-202ENST00000448301 TMEM92Q6UXU6 159 aa14.29□□□□□ -0.12
CTSS-202ENST00000448301 LEKR1Q6ZMV7 388 aa14.29□□□□□ -0.12
CTSS-202ENST00000448301 CCDC13Q8IYE1 715 aa14.29□□□□□ -0.12
CTSS-202ENST00000448301 RASGEF1CQ8N431 466 aa14.29□□□□□ -0.12
CTSS-202ENST00000448301 PCDH20Q8N6Y1 951 aaKnown RBP14.29□□□□□ -0.12
CTSS-202ENST00000448301 ZNF366Q8N895 744 aa14.29□□□□□ -0.12
CTSS-202ENST00000448301 CCNYQ8ND76 341 aa14.29□□□□□ -0.12
CTSS-202ENST00000448301 ACTL9Q8TC94 416 aa14.29□□□□□ -0.12
CTSS-202ENST00000448301 NSMCE1Q8WV22 266 aa14.29□□□□□ -0.12
CTSS-202ENST00000448301 MAML1Q92585 1016 aa14.29□□□□□ -0.12
CTSS-202ENST00000448301 PTPRN2Q92932 1015 aa14.29□□□□□ -0.12
CTSS-202ENST00000448301 CD248Q9HCU0 757 aa14.29□□□□□ -0.12
CTSS-202ENST00000448301 FCF1Q9Y324 198 aaKnown RBP14.29□□□□□ -0.12
CTSS-202ENST00000448301 TCRBV7S2A1N4TA0A589 114 aa14.28□□□□□ -0.12
CTSS-202ENST00000448301 HACD1B0YJ81 288 aa14.28□□□□□ -0.12
CTSS-202ENST00000448301 DLL1O00548 723 aa14.28□□□□□ -0.12
CTSS-202ENST00000448301 MATN3O15232 486 aa14.28□□□□□ -0.12
CTSS-202ENST00000448301 SYNCRIPO60506 623 aaKnown RBP14.28□□□□□ -0.12
CTSS-202ENST00000448301 ZNF821O75541 412 aaPredicted RBP14.28□□□□□ -0.12
CTSS-202ENST00000448301 FGGP02679 453 aa14.28□□□□□ -0.12
CTSS-202ENST00000448301 COL9A1P20849 921 aa14.28□□□□□ -0.12
CTSS-202ENST00000448301 DGKEP52429 567 aa14.28□□□□□ -0.12
CTSS-202ENST00000448301 HNRNPDQ14103 355 aaKnown RBP14.28□□□□□ -0.12
CTSS-202ENST00000448301 LBRQ14739 615 aaKnown RBP14.28□□□□□ -0.12
CTSS-202ENST00000448301 PRKD1Q15139 912 aaPredicted RBP14.28□□□□□ -0.12
CTSS-202ENST00000448301 CYTH1Q15438 398 aa14.28□□□□□ -0.12
CTSS-202ENST00000448301 Q6ZVU0 165 aa14.28□□□□□ -0.12
CTSS-202ENST00000448301 ZSCAN30Q86W11 494 aa14.28□□□□□ -0.12
CTSS-202ENST00000448301 PLPP6Q8IY26 295 aa14.28□□□□□ -0.12
CTSS-202ENST00000448301 DTWD2Q8NBA8 298 aa14.28□□□□□ -0.12
CTSS-202ENST00000448301 TFB1MQ8WVM0 346 aaKnown RBP14.28□□□□□ -0.12
CTSS-202ENST00000448301 MAIP1Q8WWC4 291 aa14.28□□□□□ -0.12
CTSS-202ENST00000448301 CCDC114Q96M63 670 aa14.28□□□□□ -0.12
CTSS-202ENST00000448301 LGMNQ99538 433 aa14.28□□□□□ -0.12
CTSS-202ENST00000448301 FRMD8P1Q9BZ68 369 aaPredicted RBP14.28□□□□□ -0.12
CTSS-202ENST00000448301 FBRSQ9HAH7 460 aa14.28□□□□□ -0.12
CTSS-202ENST00000448301 POLMQ9NP87 494 aaPredicted RBP14.28□□□□□ -0.12
CTSS-202ENST00000448301 PRSS16Q9NQE7 514 aa14.28□□□□□ -0.12
CTSS-202ENST00000448301 SPATA6Q9NWH7 488 aaPredicted RBP14.28□□□□□ -0.12
CTSS-202ENST00000448301 C2orf42Q9NWW7 574 aa14.28□□□□□ -0.12
CTSS-202ENST00000448301 TTC7AQ9ULT0 858 aaPredicted RBP14.28□□□□□ -0.12
CTSS-202ENST00000448301 MCF2LO15068 1137 aa14.27□□□□□ -0.12
CTSS-202ENST00000448301 SIN3BO75182 1162 aa14.27□□□□□ -0.12
CTSS-202ENST00000448301 GSRP00390 522 aa14.27□□□□□ -0.12
CTSS-202ENST00000448301 TUBB4AP04350 444 aa14.27□□□□□ -0.12
CTSS-202ENST00000448301 CXCL12P48061 93 aa14.27□□□□□ -0.12
CTSS-202ENST00000448301 RHOAP61586 193 aa14.27□□□□□ -0.12
CTSS-202ENST00000448301 SATB1Q01826 763 aa14.27□□□□□ -0.12
CTSS-202ENST00000448301 SLC10A7Q0GE19 358 aa14.27□□□□□ -0.12
CTSS-202ENST00000448301 AP1B1Q10567 949 aa14.27□□□□□ -0.12
CTSS-202ENST00000448301 C9orf64Q5T6V5 341 aa14.27□□□□□ -0.12
CTSS-202ENST00000448301 KIAA1211LQ6NV74 962 aa14.27□□□□□ -0.12
CTSS-202ENST00000448301 SYT10Q6XYQ8 523 aa14.27□□□□□ -0.12
CTSS-202ENST00000448301 BBS5Q8N3I7 341 aa14.27□□□□□ -0.12
CTSS-202ENST00000448301 CAMKK1Q8N5S9 505 aa14.27□□□□□ -0.12
CTSS-202ENST00000448301 TEX26Q8N6G2 289 aa14.27□□□□□ -0.12
CTSS-202ENST00000448301 C16orf45Q96MC5 204 aaPredicted RBP14.27□□□□□ -0.12
CTSS-202ENST00000448301 QKIQ96PU8 341 aaKnown RBP eCLIP14.27□□□□□ -0.12
CTSS-202ENST00000448301 PSKH2Q96QS6 385 aa14.27□□□□□ -0.12
CTSS-202ENST00000448301 CINPQ9BW66 212 aaPredicted RBP14.27□□□□□ -0.12
CTSS-202ENST00000448301 MTG2Q9H4K7 406 aa14.27□□□□□ -0.12
CTSS-202ENST00000448301 PRMT8Q9NR22 394 aaPredicted RBP14.27□□□□□ -0.12
CTSS-202ENST00000448301 POLR3BQ9NW08 1133 aaPredicted RBP14.27□□□□□ -0.12
CTSS-202ENST00000448301 LHX3Q9UBR4 397 aa14.27□□□□□ -0.12
CTSS-202ENST00000448301 SEPT3Q9UH03 358 aa14.27□□□□□ -0.12
CTSS-202ENST00000448301 AMACRQ9UHK6 382 aa14.27□□□□□ -0.12
CTSS-202ENST00000448301 SAR1BQ9Y6B6 198 aa14.27□□□□□ -0.12
CTSS-202ENST00000448301 ALOX15BO15296 676 aa14.26□□□□□ -0.13
CTSS-202ENST00000448301 ZNF189O75820 626 aaPredicted RBP14.26□□□□□ -0.13
CTSS-202ENST00000448301 C7P10643 843 aa14.26□□□□□ -0.13
CTSS-202ENST00000448301 RBP3P10745 1247 aa14.26□□□□□ -0.13
CTSS-202ENST00000448301 CCNB1P14635 433 aa14.26□□□□□ -0.13
CTSS-202ENST00000448301 VAV1P15498 845 aa14.26□□□□□ -0.13
CTSS-202ENST00000448301 CASQ1P31415 396 aa14.26□□□□□ -0.13
CTSS-202ENST00000448301 HSPA9P38646 679 aaKnown RBP14.26□□□□□ -0.13
CTSS-202ENST00000448301 MMP13P45452 471 aa14.26□□□□□ -0.13
CTSS-202ENST00000448301 RECQLP46063 649 aaPredicted RBP14.26□□□□□ -0.13
CTSS-202ENST00000448301 RENBPP51606 427 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms