RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 OR3A2P47893 321 aa9.04□□□□□ -0.96
NIPBL-202ENST00000448238 CA9Q16790 459 aa9.04□□□□□ -0.96
NIPBL-202ENST00000448238 ATP13A4Q4VNC1 1196 aa9.04□□□□□ -0.96
NIPBL-202ENST00000448238 ATXN7L2Q5T6C5 722 aaPredicted RBP9.04□□□□□ -0.96
NIPBL-202ENST00000448238 TRIM40Q6P9F5 258 aa9.04□□□□□ -0.96
NIPBL-202ENST00000448238 ELMO1Q92556 727 aa9.04□□□□□ -0.96
NIPBL-202ENST00000448238 NDUFAF4Q9P032 175 aa9.04□□□□□ -0.96
NIPBL-202ENST00000448238 APEX2Q9UBZ4 518 aa9.04□□□□□ -0.96
NIPBL-202ENST00000448238 TNFSF13BQ9Y275 285 aa9.04□□□□□ -0.96
NIPBL-202ENST00000448238 RAG1P15918 1043 aa9.04□□□□□ -0.96
NIPBL-202ENST00000448238 KCNA5P22460 613 aa9.04□□□□□ -0.96
NIPBL-202ENST00000448238 DLSTP36957 453 aa9.04□□□□□ -0.96
NIPBL-202ENST00000448238 NAMPTP43490 491 aa9.04□□□□□ -0.96
NIPBL-202ENST00000448238 BCL2A1Q16548 175 aa9.04□□□□□ -0.96
NIPBL-202ENST00000448238 ZCCHC12Q6PEW1 402 aa9.04□□□□□ -0.96
NIPBL-202ENST00000448238 DCP1BQ8IZD4 617 aaKnown RBP9.04□□□□□ -0.96
NIPBL-202ENST00000448238 HNRNPLLQ8WVV9 542 aaKnown RBP9.04□□□□□ -0.96
NIPBL-202ENST00000448238 PAK6Q9NQU5 681 aaPredicted RBP9.04□□□□□ -0.96
NIPBL-202ENST00000448238 MOCS1Q9NZB8 636 aa9.04□□□□□ -0.96
NIPBL-202ENST00000448238 WDR37Q9Y2I8 494 aa9.04□□□□□ -0.96
NIPBL-202ENST00000448238 LEMD3Q9Y2U8 911 aa9.04□□□□□ -0.96
NIPBL-202ENST00000448238 MPZL2O60487 215 aa9.04□□□□□ -0.96
NIPBL-202ENST00000448238 DGAT1O75907 488 aa9.04□□□□□ -0.96
NIPBL-202ENST00000448238 ANGPTL1O95841 491 aa9.04□□□□□ -0.96
NIPBL-202ENST00000448238 SLC1A2P43004 574 aa9.04□□□□□ -0.96
NIPBL-202ENST00000448238 BCAMP50895 628 aa9.04□□□□□ -0.96
NIPBL-202ENST00000448238 PRKCEQ02156 737 aa9.04□□□□□ -0.96
NIPBL-202ENST00000448238 LARS2Q15031 903 aaKnown RBP9.04□□□□□ -0.96
NIPBL-202ENST00000448238 TPGS1Q6ZTW0 290 aa9.04□□□□□ -0.96
NIPBL-202ENST00000448238 ZNF720Q7Z2F6 126 aa9.04□□□□□ -0.96
NIPBL-202ENST00000448238 OSGEPL1Q9H4B0 414 aa9.04□□□□□ -0.96
NIPBL-202ENST00000448238 PCDH12Q9NPG4 1184 aa9.04□□□□□ -0.96
NIPBL-202ENST00000448238 GIN1Q9NXP7 522 aa9.04□□□□□ -0.96
NIPBL-202ENST00000448238 PCDHGB2Q9Y5G2 931 aa9.04□□□□□ -0.96
NIPBL-202ENST00000448238 PCDHGB1Q9Y5G3 927 aa9.04□□□□□ -0.96
NIPBL-202ENST00000448238 ZBTB7BO15156 539 aaPredicted RBP9.04□□□□□ -0.96
NIPBL-202ENST00000448238 RAB4AP20338 218 aa9.04□□□□□ -0.96
NIPBL-202ENST00000448238 LHCGRP22888 699 aa9.04□□□□□ -0.96
NIPBL-202ENST00000448238 SCNN1BP51168 640 aa9.04□□□□□ -0.96
NIPBL-202ENST00000448238 ARSJQ5FYB0 599 aaPredicted RBP9.04□□□□□ -0.96
NIPBL-202ENST00000448238 ZNF746Q6NUN9 644 aaPredicted RBP9.04□□□□□ -0.96
NIPBL-202ENST00000448238 COMMD4Q9H0A8 199 aa9.04□□□□□ -0.96
NIPBL-202ENST00000448238 KCNN3Q9UGI6 736 aa9.04□□□□□ -0.96
NIPBL-202ENST00000448238 SNAPC4Q5SXM2 1469 aa9.04□□□□□ -0.96
NIPBL-202ENST00000448238 C2orf74A8MZ97 194 aa9.04□□□□□ -0.96
NIPBL-202ENST00000448238 TGM6O95932 706 aa9.04□□□□□ -0.96
NIPBL-202ENST00000448238 ITGA8P53708 1063 aa9.04□□□□□ -0.96
NIPBL-202ENST00000448238 CDH13P55290 713 aa9.04□□□□□ -0.96
NIPBL-202ENST00000448238 ZNF549Q6P9A3 640 aa9.04□□□□□ -0.96
NIPBL-202ENST00000448238 TIGD4Q8IY51 512 aa9.04□□□□□ -0.96
NIPBL-202ENST00000448238 OR51D1Q8NGF3 324 aa9.04□□□□□ -0.96
NIPBL-202ENST00000448238 C1orf216Q8TAB5 229 aa9.04□□□□□ -0.96
NIPBL-202ENST00000448238 BRSK1Q8TDC3 778 aa9.04□□□□□ -0.96
NIPBL-202ENST00000448238 PCDHB2Q9Y5E7 798 aa9.04□□□□□ -0.96
NIPBL-202ENST00000448238 MAP3K1Q13233 1512 aa9.04□□□□□ -0.96
NIPBL-202ENST00000448238 SEC22BO75396 215 aa9.04□□□□□ -0.96
NIPBL-202ENST00000448238 RFC5P40937 340 aa9.04□□□□□ -0.96
NIPBL-202ENST00000448238 POLD2P49005 469 aa9.04□□□□□ -0.96
NIPBL-202ENST00000448238 POLR2LP62875 67 aaKnown RBP9.04□□□□□ -0.96
NIPBL-202ENST00000448238 TDRD10Q5VZ19 366 aaKnown RBP9.04□□□□□ -0.96
NIPBL-202ENST00000448238 GALNT7Q86SF2 657 aa9.04□□□□□ -0.96
NIPBL-202ENST00000448238 ZBTB8BQ8NAP8 495 aaPredicted RBP9.04□□□□□ -0.96
NIPBL-202ENST00000448238 DNAAF1Q8NEP3 725 aa9.04□□□□□ -0.96
NIPBL-202ENST00000448238 SLC39A8Q9C0K1 460 aa9.04□□□□□ -0.96
NIPBL-202ENST00000448238 WDCPQ9H6R7 721 aa9.04□□□□□ -0.96
NIPBL-202ENST00000448238 NMRAL1Q9HBL8 299 aa9.04□□□□□ -0.96
NIPBL-202ENST00000448238 EIF3KQ9UBQ5 218 aaKnown RBP9.04□□□□□ -0.96
NIPBL-202ENST00000448238 DPP7Q9UHL4 492 aa9.04□□□□□ -0.96
NIPBL-202ENST00000448238 F9P00740 461 aa9.03□□□□□ -0.96
NIPBL-202ENST00000448238 PAX7P23759 505 aa9.03□□□□□ -0.96
NIPBL-202ENST00000448238 ACAT1P24752 427 aaKnown RBP9.03□□□□□ -0.96
NIPBL-202ENST00000448238 PDK2Q15119 407 aa9.03□□□□□ -0.96
NIPBL-202ENST00000448238 RAB12Q6IQ22 244 aa9.03□□□□□ -0.96
NIPBL-202ENST00000448238 DCAF4Q8WV16 495 aa9.03□□□□□ -0.96
NIPBL-202ENST00000448238 C8orf37Q96NL8 207 aa9.03□□□□□ -0.96
NIPBL-202ENST00000448238 ACOX2Q99424 681 aa9.03□□□□□ -0.96
NIPBL-202ENST00000448238 ZYG11BQ9C0D3 744 aa9.03□□□□□ -0.96
NIPBL-202ENST00000448238 TAS2R13Q9NYV9 303 aa9.03□□□□□ -0.96
NIPBL-202ENST00000448238 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.03□□□□□ -0.96
NIPBL-202ENST00000448238 KCND2Q9NZV8 630 aa9.03□□□□□ -0.96
NIPBL-202ENST00000448238 PLA2G4CQ9UP65 541 aa9.03□□□□□ -0.96
NIPBL-202ENST00000448238 PHF24Q9UPV7 400 aa9.03□□□□□ -0.96
NIPBL-202ENST00000448238 CCNYL3P0C7X3 344 aa9.03□□□□□ -0.96
NIPBL-202ENST00000448238 PPIBP23284 216 aaKnown RBP9.03□□□□□ -0.96
NIPBL-202ENST00000448238 HNF4AP41235 474 aa9.03□□□□□ -0.96
NIPBL-202ENST00000448238 SLC1A6P48664 564 aa9.03□□□□□ -0.96
NIPBL-202ENST00000448238 WDR72Q3MJ13 1102 aa9.03□□□□□ -0.96
NIPBL-202ENST00000448238 GPR139Q6DWJ6 353 aa9.03□□□□□ -0.96
NIPBL-202ENST00000448238 ADNP2Q6IQ32 1131 aa9.03□□□□□ -0.96
NIPBL-202ENST00000448238 SLC16A9Q7RTY1 509 aa9.03□□□□□ -0.96
NIPBL-202ENST00000448238 CHST4Q8NCG5 386 aa9.03□□□□□ -0.96
NIPBL-202ENST00000448238 OR7D4Q8NG98 312 aa9.03□□□□□ -0.96
NIPBL-202ENST00000448238 STK32AQ8WU08 396 aa9.03□□□□□ -0.96
NIPBL-202ENST00000448238 PRICKLE1Q96MT3 831 aaPredicted RBP9.03□□□□□ -0.96
NIPBL-202ENST00000448238 HMGXB4Q9UGU5 601 aa9.03□□□□□ -0.96
NIPBL-202ENST00000448238 HIF3AQ9Y2N7 669 aa9.03□□□□□ -0.96
NIPBL-202ENST00000448238 EML1O00423 815 aa9.03□□□□□ -0.96
NIPBL-202ENST00000448238 FESP07332 822 aa9.03□□□□□ -0.96
NIPBL-202ENST00000448238 MPP3Q13368 585 aa9.03□□□□□ -0.96
NIPBL-202ENST00000448238 FIP1L1Q6UN15 594 aaKnown RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms