RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 SLITRK2Q9H156 845 aa7.88□□□□□ -1.15
NEDD9-204ENST00000448183 POPDC2Q9HBU9 364 aa7.88□□□□□ -1.15
NEDD9-204ENST00000448183 SEMA4BQ9NPR2 832 aaPredicted RBP7.88□□□□□ -1.15
NEDD9-204ENST00000448183 PACSIN3Q9UKS6 424 aa7.88□□□□□ -1.15
NEDD9-204ENST00000448183 CRYL1Q9Y2S2 319 aa7.88□□□□□ -1.15
NEDD9-204ENST00000448183 AP4B1Q9Y6B7 739 aa7.88□□□□□ -1.15
NEDD9-204ENST00000448183 STON1Q9Y6Q2 735 aa7.88□□□□□ -1.15
NEDD9-204ENST00000448183 TECPR2O15040 1411 aa7.88□□□□□ -1.15
NEDD9-204ENST00000448183 OR56A5P0C7T3 313 aa7.88□□□□□ -1.15
NEDD9-204ENST00000448183 VAV1P15498 845 aa7.88□□□□□ -1.15
NEDD9-204ENST00000448183 JAK1P23458 1154 aa7.88□□□□□ -1.15
NEDD9-204ENST00000448183 PSMB4P28070 264 aa7.88□□□□□ -1.15
NEDD9-204ENST00000448183 SHMT1P34896 483 aa7.88□□□□□ -1.15
NEDD9-204ENST00000448183 CHKAP35790 457 aa7.88□□□□□ -1.15
NEDD9-204ENST00000448183 HPCAL1P37235 193 aa7.88□□□□□ -1.15
NEDD9-204ENST00000448183 STAT5AP42229 794 aa7.88□□□□□ -1.15
NEDD9-204ENST00000448183 CDC42P60953 191 aa7.88□□□□□ -1.15
NEDD9-204ENST00000448183 PFKFB4Q16877 469 aa7.88□□□□□ -1.15
NEDD9-204ENST00000448183 ZIK1Q3SY52 487 aaPredicted RBP7.88□□□□□ -1.15
NEDD9-204ENST00000448183 SLC27A1Q6PCB7 646 aa7.88□□□□□ -1.15
NEDD9-204ENST00000448183 C1orf186Q6ZWK4 172 aa7.88□□□□□ -1.15
NEDD9-204ENST00000448183 ZNF438Q7Z4V0 828 aa7.88□□□□□ -1.15
NEDD9-204ENST00000448183 TRABD2AQ86V40 505 aa7.88□□□□□ -1.15
NEDD9-204ENST00000448183 ADAM32Q8TC27 787 aa7.88□□□□□ -1.15
NEDD9-204ENST00000448183 HASPINQ8TF76 798 aa7.88□□□□□ -1.15
NEDD9-204ENST00000448183 ACE2Q9BYF1 805 aaPredicted RBP7.88□□□□□ -1.15
NEDD9-204ENST00000448183 OSBPL6Q9BZF3 934 aa7.88□□□□□ -1.15
NEDD9-204ENST00000448183 ALG9Q9H6U8 611 aa7.88□□□□□ -1.15
NEDD9-204ENST00000448183 AAASQ9NRG9 546 aa7.88□□□□□ -1.15
NEDD9-204ENST00000448183 RAD18Q9NS91 495 aa7.88□□□□□ -1.15
NEDD9-204ENST00000448183 MBD2Q9UBB5 411 aa7.88□□□□□ -1.15
NEDD9-204ENST00000448183 PCDHA11Q9Y5I1 949 aa7.88□□□□□ -1.15
NEDD9-204ENST00000448183 ZMYM2Q9UBW7 1377 aa7.88□□□□□ -1.15
NEDD9-204ENST00000448183 ANKRD63C9JTQ0 380 aa7.88□□□□□ -1.15
NEDD9-204ENST00000448183 LIN7AO14910 233 aaPredicted RBP7.88□□□□□ -1.15
NEDD9-204ENST00000448183 CYP7B1O75881 506 aa7.88□□□□□ -1.15
NEDD9-204ENST00000448183 BMP10O95393 424 aa7.88□□□□□ -1.15
NEDD9-204ENST00000448183 CCDC166P0CW27 439 aa7.88□□□□□ -1.15
NEDD9-204ENST00000448183 FMO4P31512 558 aa7.88□□□□□ -1.15
NEDD9-204ENST00000448183 GRIA4P48058 902 aa7.88□□□□□ -1.15
NEDD9-204ENST00000448183 MARCKSL1P49006 195 aa7.88□□□□□ -1.15
NEDD9-204ENST00000448183 FOLH1Q04609 750 aa7.88□□□□□ -1.15
NEDD9-204ENST00000448183 SLC5A9Q2M3M2 681 aa7.88□□□□□ -1.15
NEDD9-204ENST00000448183 NKAPQ8N5F7 415 aaKnown RBP7.88□□□□□ -1.15
NEDD9-204ENST00000448183 FAM81AQ8TBF8 368 aa7.88□□□□□ -1.15
NEDD9-204ENST00000448183 S100ZQ8WXG8 99 aa7.88□□□□□ -1.15
NEDD9-204ENST00000448183 SERAC1Q96JX3 654 aa7.88□□□□□ -1.15
NEDD9-204ENST00000448183 ZBTB45Q96K62 511 aaPredicted RBP7.88□□□□□ -1.15
NEDD9-204ENST00000448183 TCF12Q99081 682 aa7.88□□□□□ -1.15
NEDD9-204ENST00000448183 MTG1Q9BT17 334 aaPredicted RBP7.88□□□□□ -1.15
NEDD9-204ENST00000448183 FAM126AQ9BYI3 521 aaPredicted RBP7.88□□□□□ -1.15
NEDD9-204ENST00000448183 ZCCHC2Q9C0B9 1178 aaKnown RBP7.88□□□□□ -1.15
NEDD9-204ENST00000448183 EPB41L1Q9H4G0 881 aa7.88□□□□□ -1.15
NEDD9-204ENST00000448183 ABCB10Q9NRK6 738 aa7.88□□□□□ -1.15
NEDD9-204ENST00000448183 PRKAG3Q9UGI9 489 aa7.88□□□□□ -1.15
NEDD9-204ENST00000448183 PLA2G4CQ9UP65 541 aa7.88□□□□□ -1.15
NEDD9-204ENST00000448183 TIMM13Q9Y5L4 95 aaPredicted RBP7.88□□□□□ -1.15
NEDD9-204ENST00000448183 GMPPBQ9Y5P6 360 aa7.88□□□□□ -1.15
NEDD9-204ENST00000448183 ATXN2Q99700 1313 aaKnown RBP7.88□□□□□ -1.15
NEDD9-204ENST00000448183 CASTOR2A6NHX0 329 aa7.88□□□□□ -1.15
NEDD9-204ENST00000448183 LACTBL1A8MY62 500 aa7.88□□□□□ -1.15
NEDD9-204ENST00000448183 KLHL18O94889 574 aa7.88□□□□□ -1.15
NEDD9-204ENST00000448183 GLRA2P23416 452 aa7.88□□□□□ -1.15
NEDD9-204ENST00000448183 NOS2P35228 1153 aa7.88□□□□□ -1.15
NEDD9-204ENST00000448183 ZNF157P51786 506 aaPredicted RBP7.88□□□□□ -1.15
NEDD9-204ENST00000448183 CLCN5P51795 746 aa7.88□□□□□ -1.15
NEDD9-204ENST00000448183 NAA20P61599 178 aa7.88□□□□□ -1.15
NEDD9-204ENST00000448183 MFSD4BQ5TF39 518 aa7.88□□□□□ -1.15
NEDD9-204ENST00000448183 TRMT11Q7Z4G4 463 aaKnown RBP7.88□□□□□ -1.15
NEDD9-204ENST00000448183 PTGR2Q8N8N7 351 aaPredicted RBP7.88□□□□□ -1.15
NEDD9-204ENST00000448183 SHC3Q92529 594 aa7.88□□□□□ -1.15
NEDD9-204ENST00000448183 WNT8BQ93098 351 aa7.88□□□□□ -1.15
NEDD9-204ENST00000448183 LENG1Q96BZ8 264 aaPredicted RBP7.88□□□□□ -1.15
NEDD9-204ENST00000448183 DGCR14Q96DF8 476 aaKnown RBP7.88□□□□□ -1.15
NEDD9-204ENST00000448183 ZHX1-C8orf76Q96EF9 292 aa7.88□□□□□ -1.15
NEDD9-204ENST00000448183 CHID1Q9BWS9 393 aa7.88□□□□□ -1.15
NEDD9-204ENST00000448183 SLC4A5Q9BY07 1137 aa7.88□□□□□ -1.15
NEDD9-204ENST00000448183 OSGEPL1Q9H4B0 414 aa7.88□□□□□ -1.15
NEDD9-204ENST00000448183 KLQ9UEF7 1012 aa7.88□□□□□ -1.15
NEDD9-204ENST00000448183 VPS51Q9UID3 782 aa7.88□□□□□ -1.15
NEDD9-204ENST00000448183 RPS6KA6Q9UK32 745 aa7.88□□□□□ -1.15
NEDD9-204ENST00000448183 PCDHB5Q9Y5E4 795 aa7.88□□□□□ -1.15
NEDD9-204ENST00000448183 JCADQ9P266 1359 aa7.87□□□□□ -1.15
NEDD9-204ENST00000448183 ALOX15BO15296 676 aa7.87□□□□□ -1.15
NEDD9-204ENST00000448183 PEX11AO75192 247 aa7.87□□□□□ -1.15
NEDD9-204ENST00000448183 COX7A2P14406 83 aa7.87□□□□□ -1.15
NEDD9-204ENST00000448183 TYMPP19971 482 aa7.87□□□□□ -1.15
NEDD9-204ENST00000448183 CASP5P51878 434 aa7.87□□□□□ -1.15
NEDD9-204ENST00000448183 ZNF143P52747 638 aaPredicted RBP7.87□□□□□ -1.15
NEDD9-204ENST00000448183 TRAP1Q12931 704 aaKnown RBP7.87□□□□□ -1.15
NEDD9-204ENST00000448183 RIPK1Q13546 671 aa7.87□□□□□ -1.15
NEDD9-204ENST00000448183 MZT2AQ6P582 158 aa7.87□□□□□ -1.15
NEDD9-204ENST00000448183 ARHGAP36Q6ZRI8 547 aa7.87□□□□□ -1.15
NEDD9-204ENST00000448183 IZUMO1Q8IYV9 350 aa7.87□□□□□ -1.15
NEDD9-204ENST00000448183 GLIS3Q8NEA6 775 aa7.87□□□□□ -1.15
NEDD9-204ENST00000448183 ZNF671Q8TAW3 534 aa7.87□□□□□ -1.15
NEDD9-204ENST00000448183 NARS2Q96I59 477 aaKnown RBP7.87□□□□□ -1.15
NEDD9-204ENST00000448183 MARK4Q96L34 752 aa7.87□□□□□ -1.15
NEDD9-204ENST00000448183 RNF157Q96PX1 679 aa7.87□□□□□ -1.15
NEDD9-204ENST00000448183 EBNA1BP2Q99848 306 aaKnown RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms