RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 SNF8Q96H20 258 aa19.88■□□□□ 0.77
SGCE-207ENST00000447873 CINPQ9BW66 212 aaPredicted RBP19.88■□□□□ 0.77
SGCE-207ENST00000447873 NT5MQ9NPB1 228 aa19.88■□□□□ 0.77
SGCE-207ENST00000447873 TRPV5Q9NQA5 729 aa19.88■□□□□ 0.77
SGCE-207ENST00000447873 HAUS2Q9NVX0 235 aa19.88■□□□□ 0.77
SGCE-207ENST00000447873 SEPT3Q9UH03 358 aa19.88■□□□□ 0.77
SGCE-207ENST00000447873 TERF1P54274 439 aa19.87■□□□□ 0.77
SGCE-207ENST00000447873 DRG2P55039 364 aaKnown RBP19.87■□□□□ 0.77
SGCE-207ENST00000447873 BASP1P80723 227 aaKnown RBP19.87■□□□□ 0.77
SGCE-207ENST00000447873 KDSRQ06136 332 aa19.87■□□□□ 0.77
SGCE-207ENST00000447873 SLC20A2Q08357 652 aa19.87■□□□□ 0.77
SGCE-207ENST00000447873 CALCOCO2Q13137 446 aa19.87■□□□□ 0.77
SGCE-207ENST00000447873 TRADDQ15628 312 aa19.87■□□□□ 0.77
SGCE-207ENST00000447873 PREPLQ4J6C6 727 aaPredicted RBP19.87■□□□□ 0.77
SGCE-207ENST00000447873 INO80DQ53TQ3 878 aaPredicted RBP19.87■□□□□ 0.77
SGCE-207ENST00000447873 SEC14L1Q92503 715 aa19.87■□□□□ 0.77
SGCE-207ENST00000447873 ZNF419Q96HQ0 510 aaPredicted RBP19.87■□□□□ 0.77
SGCE-207ENST00000447873 PNKPQ96T60 521 aa19.87■□□□□ 0.77
SGCE-207ENST00000447873 GDF3Q9NR23 364 aa19.87■□□□□ 0.77
SGCE-207ENST00000447873 RAB6BQ9NRW1 208 aa19.87■□□□□ 0.77
SGCE-207ENST00000447873 FAM114A2Q9NRY5 505 aa19.87■□□□□ 0.77
SGCE-207ENST00000447873 RSPH14Q9UHP6 348 aa19.87■□□□□ 0.77
SGCE-207ENST00000447873 SLC25A13Q9UJS0 675 aa19.87■□□□□ 0.77
SGCE-207ENST00000447873 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.87■□□□□ 0.77
SGCE-207ENST00000447873 CXorf51AA0A1B0GTR3 108 aa19.87■□□□□ 0.77
SGCE-207ENST00000447873 METTL18O95568 372 aa19.87■□□□□ 0.77
SGCE-207ENST00000447873 CD160O95971 181 aa19.87■□□□□ 0.77
SGCE-207ENST00000447873 MT-CO1P00395 513 aa19.87■□□□□ 0.77
SGCE-207ENST00000447873 IVDP26440 423 aa19.87■□□□□ 0.77
SGCE-207ENST00000447873 CTSOP43234 321 aaPredicted RBP19.87■□□□□ 0.77
SGCE-207ENST00000447873 SOX9P48436 509 aa19.87■□□□□ 0.77
SGCE-207ENST00000447873 ECT2LQ008S8 904 aa19.87■□□□□ 0.77
SGCE-207ENST00000447873 ITKQ08881 620 aa19.87■□□□□ 0.77
SGCE-207ENST00000447873 PARP6Q2NL67 630 aa19.87■□□□□ 0.77
SGCE-207ENST00000447873 TMEM215Q68D42 235 aa19.87■□□□□ 0.77
SGCE-207ENST00000447873 METTL3Q86U44 580 aaKnown RBP19.87■□□□□ 0.77
SGCE-207ENST00000447873 ADHFE1Q8IWW8 467 aa19.87■□□□□ 0.77
SGCE-207ENST00000447873 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.87■□□□□ 0.77
SGCE-207ENST00000447873 BBOF1Q8ND07 529 aa19.87■□□□□ 0.77
SGCE-207ENST00000447873 CASKIN2Q8WXE0 1202 aa19.87■□□□□ 0.77
SGCE-207ENST00000447873 IFT81Q8WYA0 676 aa19.87■□□□□ 0.77
SGCE-207ENST00000447873 RUBCNQ92622 972 aa19.87■□□□□ 0.77
SGCE-207ENST00000447873 DNASE1L2Q92874 299 aa19.87■□□□□ 0.77
SGCE-207ENST00000447873 TTC17Q96AE7 1141 aa19.87■□□□□ 0.77
SGCE-207ENST00000447873 CIPCQ9C0C6 399 aa19.87■□□□□ 0.77
SGCE-207ENST00000447873 WHRNQ9P202 907 aa19.87■□□□□ 0.77
SGCE-207ENST00000447873 PRKAG3Q9UGI9 489 aa19.87■□□□□ 0.77
SGCE-207ENST00000447873 TPX2Q9ULW0 747 aaKnown RBP19.87■□□□□ 0.77
SGCE-207ENST00000447873 BHMG1C9JSJ3 638 aaPredicted RBP19.86■□□□□ 0.77
SGCE-207ENST00000447873 F5H423 210 aaPredicted RBP19.86■□□□□ 0.77
SGCE-207ENST00000447873 DNALI1O14645 258 aaPredicted RBP19.86■□□□□ 0.77
SGCE-207ENST00000447873 SEC31AO94979 1220 aaKnown RBP19.86■□□□□ 0.77
SGCE-207ENST00000447873 ATP5BP06576 529 aaKnown RBP19.86■□□□□ 0.77
SGCE-207ENST00000447873 ITIH2P19823 946 aa19.86■□□□□ 0.77
SGCE-207ENST00000447873 NFKB1P19838 968 aa19.86■□□□□ 0.77
SGCE-207ENST00000447873 PSMB4P28070 264 aa19.86■□□□□ 0.77
SGCE-207ENST00000447873 CD68P34810 354 aaPredicted RBP19.86■□□□□ 0.77
SGCE-207ENST00000447873 FDFT1P37268 417 aa19.86■□□□□ 0.77
SGCE-207ENST00000447873 SERPINH1P50454 418 aaKnown RBP19.86■□□□□ 0.77
SGCE-207ENST00000447873 TDGQ13569 410 aa19.86■□□□□ 0.77
SGCE-207ENST00000447873 CYTH1Q15438 398 aa19.86■□□□□ 0.77
SGCE-207ENST00000447873 FAXCQ5TGI0 409 aa19.86■□□□□ 0.77
SGCE-207ENST00000447873 IZUMO3Q5VZ72 239 aa19.86■□□□□ 0.77
SGCE-207ENST00000447873 NAIF1Q69YI7 327 aaPredicted RBP19.86■□□□□ 0.77
SGCE-207ENST00000447873 PCGF5Q86SE9 256 aa19.86■□□□□ 0.77
SGCE-207ENST00000447873 TERB1Q8NA31 727 aa19.86■□□□□ 0.77
SGCE-207ENST00000447873 ATP11CQ8NB49 1132 aa19.86■□□□□ 0.77
SGCE-207ENST00000447873 CHFRQ96EP1 664 aa19.86■□□□□ 0.77
SGCE-207ENST00000447873 RPL10LQ96L21 214 aaKnown RBP19.86■□□□□ 0.77
SGCE-207ENST00000447873 PSKH2Q96QS6 385 aa19.86■□□□□ 0.77
SGCE-207ENST00000447873 GBA3Q9H227 469 aa19.86■□□□□ 0.77
SGCE-207ENST00000447873 ETNK1Q9HBU6 452 aa19.86■□□□□ 0.77
SGCE-207ENST00000447873 GLOD4Q9HC38 313 aa19.86■□□□□ 0.77
SGCE-207ENST00000447873 ATP8A1Q9Y2Q0 1164 aa19.86■□□□□ 0.77
SGCE-207ENST00000447873 TBC1D3BA6NDS4 549 aa19.85■□□□□ 0.77
SGCE-207ENST00000447873 E7EVH7 732 aa19.85■□□□□ 0.77
SGCE-207ENST00000447873 TMCC1O94876 653 aa19.85■□□□□ 0.77
SGCE-207ENST00000447873 MCM3P25205 808 aa19.85■□□□□ 0.77
SGCE-207ENST00000447873 STK19P49842 368 aaPredicted RBP19.85■□□□□ 0.77
SGCE-207ENST00000447873 MAXP61244 160 aa19.85■□□□□ 0.77
SGCE-207ENST00000447873 PFKPQ01813 784 aa19.85■□□□□ 0.77
SGCE-207ENST00000447873 MESP2Q0VG99 397 aa19.85■□□□□ 0.77
SGCE-207ENST00000447873 CUL1Q13616 776 aa19.85■□□□□ 0.77
SGCE-207ENST00000447873 NUDT18Q6ZVK8 323 aa19.85■□□□□ 0.77
SGCE-207ENST00000447873 PHTF2Q8N3S3 785 aa19.85■□□□□ 0.77
SGCE-207ENST00000447873 TSEN2Q8NCE0 465 aaKnown RBP19.85■□□□□ 0.77
SGCE-207ENST00000447873 PARD6BQ9BYG5 372 aa19.85■□□□□ 0.77
SGCE-207ENST00000447873 POLR1EQ9GZS1 481 aaKnown RBP19.85■□□□□ 0.77
SGCE-207ENST00000447873 HS3ST2Q9Y278 367 aa19.85■□□□□ 0.77
SGCE-207ENST00000447873 FCF1Q9Y324 198 aaKnown RBP19.85■□□□□ 0.77
SGCE-207ENST00000447873 K7ERQ8 282 aa19.84■□□□□ 0.77
SGCE-207ENST00000447873 NDC80O14777 642 aa19.84■□□□□ 0.77
SGCE-207ENST00000447873 TIMM44O43615 452 aa19.84■□□□□ 0.77
SGCE-207ENST00000447873 NARSO43776 548 aaKnown RBP19.84■□□□□ 0.77
SGCE-207ENST00000447873 KAT7O95251 611 aa19.84■□□□□ 0.77
SGCE-207ENST00000447873 ASLP04424 464 aa19.84■□□□□ 0.77
SGCE-207ENST00000447873 APODP05090 189 aa19.84■□□□□ 0.77
SGCE-207ENST00000447873 TUBBP07437 444 aa19.84■□□□□ 0.77
SGCE-207ENST00000447873 HSPA9P38646 679 aaKnown RBP19.84■□□□□ 0.77
SGCE-207ENST00000447873 GRIA2P42262 883 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms