RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 TMEM139Q8IV31 216 aa17.79■□□□□ 0.44
SMARCAL1-209ENST00000444508 TXLNBQ8N3L3 684 aa17.79■□□□□ 0.44
SMARCAL1-209ENST00000444508 GPR161Q8N6U8 529 aaKnown RBP17.79■□□□□ 0.44
SMARCAL1-209ENST00000444508 OR2A12Q8NGT7 310 aa17.79■□□□□ 0.44
SMARCAL1-209ENST00000444508 FAM71BQ8TC56 605 aa17.79■□□□□ 0.44
SMARCAL1-209ENST00000444508 TSC1Q92574 1164 aa17.79■□□□□ 0.44
SMARCAL1-209ENST00000444508 FOXJ1Q92949 421 aa17.79■□□□□ 0.44
SMARCAL1-209ENST00000444508 ISG20Q96AZ6 181 aaKnown RBP17.79■□□□□ 0.44
SMARCAL1-209ENST00000444508 GPR174Q9BXC1 333 aa17.79■□□□□ 0.44
SMARCAL1-209ENST00000444508 SLC39A8Q9C0K1 460 aa17.79■□□□□ 0.44
SMARCAL1-209ENST00000444508 BTBD1Q9H0C5 482 aa17.79■□□□□ 0.44
SMARCAL1-209ENST00000444508 ARRDC1-AS1Q9H2J1 176 aa17.79■□□□□ 0.44
SMARCAL1-209ENST00000444508 GRPEL1Q9HAV7 217 aa17.79■□□□□ 0.44
SMARCAL1-209ENST00000444508 KLHL11Q9NVR0 708 aa17.79■□□□□ 0.44
SMARCAL1-209ENST00000444508 FBXL12Q9NXK8 326 aa17.79■□□□□ 0.44
SMARCAL1-209ENST00000444508 TFR2Q9UP52 801 aa17.79■□□□□ 0.44
SMARCAL1-209ENST00000444508 ACTL7AQ9Y615 435 aa17.79■□□□□ 0.44
SMARCAL1-209ENST00000444508 PTPRZ1P23471 2315 aaPredicted RBP17.78■□□□□ 0.44
SMARCAL1-209ENST00000444508 NUP205Q92621 2012 aa17.78■□□□□ 0.44
SMARCAL1-209ENST00000444508 A0A1W2PP55 124 aa17.78■□□□□ 0.44
SMARCAL1-209ENST00000444508 LRP3O75074 770 aa17.78■□□□□ 0.44
SMARCAL1-209ENST00000444508 RNASEH2AO75792 299 aaKnown RBP17.78■□□□□ 0.44
SMARCAL1-209ENST00000444508 CD160O95971 181 aa17.78■□□□□ 0.44
SMARCAL1-209ENST00000444508 PRNPP04156 253 aa17.78■□□□□ 0.44
SMARCAL1-209ENST00000444508 CHRNA3P32297 505 aa17.78■□□□□ 0.44
SMARCAL1-209ENST00000444508 DPYSL3Q14195 570 aa17.78■□□□□ 0.44
SMARCAL1-209ENST00000444508 INO80DQ53TQ3 878 aaPredicted RBP17.78■□□□□ 0.44
SMARCAL1-209ENST00000444508 ODF2Q5BJF6 829 aa17.78■□□□□ 0.44
SMARCAL1-209ENST00000444508 CARD16Q5EG05 197 aa17.78■□□□□ 0.44
SMARCAL1-209ENST00000444508 AFMIDQ63HM1 303 aa17.78■□□□□ 0.44
SMARCAL1-209ENST00000444508 DEFB119Q8N690 84 aa17.78■□□□□ 0.44
SMARCAL1-209ENST00000444508 NPWQ8N729 165 aa17.78■□□□□ 0.44
SMARCAL1-209ENST00000444508 ACRBPQ8NEB7 543 aa17.78■□□□□ 0.44
SMARCAL1-209ENST00000444508 PIP4K2CQ8TBX8 421 aa17.78■□□□□ 0.44
SMARCAL1-209ENST00000444508 CALR3Q96L12 384 aaKnown RBP17.78■□□□□ 0.44
SMARCAL1-209ENST00000444508 ZNF670Q9BS34 389 aa17.78■□□□□ 0.44
SMARCAL1-209ENST00000444508 KLC2Q9H0B6 622 aa17.78■□□□□ 0.44
SMARCAL1-209ENST00000444508 SP110Q9HB58 689 aa17.78■□□□□ 0.44
SMARCAL1-209ENST00000444508 SGK2Q9HBY8 427 aa17.78■□□□□ 0.44
SMARCAL1-209ENST00000444508 UBA2Q9UBT2 640 aaPredicted RBP17.78■□□□□ 0.44
SMARCAL1-209ENST00000444508 PPM1HQ9ULR3 514 aa17.78■□□□□ 0.44
SMARCAL1-209ENST00000444508 FZD4Q9ULV1 537 aa17.78■□□□□ 0.44
SMARCAL1-209ENST00000444508 CEP192Q8TEP8 1941 aa17.78■□□□□ 0.44
SMARCAL1-209ENST00000444508 BCLAF3A2AJT9 711 aaKnown RBP17.77■□□□□ 0.44
SMARCAL1-209ENST00000444508 BUB1BO60566 1050 aaPredicted RBP17.77■□□□□ 0.44
SMARCAL1-209ENST00000444508 PRAMEF11O60813 436 aa17.77■□□□□ 0.44
SMARCAL1-209ENST00000444508 TMCC1O94876 653 aa17.77■□□□□ 0.44
SMARCAL1-209ENST00000444508 CD48P09326 243 aa17.77■□□□□ 0.44
SMARCAL1-209ENST00000444508 TNNT1P13805 278 aa17.77■□□□□ 0.44
SMARCAL1-209ENST00000444508 COMTP21964 271 aa17.77■□□□□ 0.44
SMARCAL1-209ENST00000444508 MPLP40238 635 aa17.77■□□□□ 0.44
SMARCAL1-209ENST00000444508 DPP6P42658 865 aa17.77■□□□□ 0.44
SMARCAL1-209ENST00000444508 PTGER3P43115 390 aa17.77■□□□□ 0.44
SMARCAL1-209ENST00000444508 ARSEP51690 589 aa17.77■□□□□ 0.44
SMARCAL1-209ENST00000444508 VAV2P52735 878 aa17.77■□□□□ 0.44
SMARCAL1-209ENST00000444508 NAP1L1P55209 391 aaKnown RBP17.77■□□□□ 0.44
SMARCAL1-209ENST00000444508 SNRPD1P62314 119 aaKnown RBP17.77■□□□□ 0.44
SMARCAL1-209ENST00000444508 ZNF33AQ06730 810 aa17.77■□□□□ 0.44
SMARCAL1-209ENST00000444508 SPEM2Q0P670 501 aa17.77■□□□□ 0.44
SMARCAL1-209ENST00000444508 SYCP2LQ5T4T6 812 aa17.77■□□□□ 0.44
SMARCAL1-209ENST00000444508 LRRC38Q5VT99 294 aa17.77■□□□□ 0.44
SMARCAL1-209ENST00000444508 DPY19L3Q6ZPD9 716 aa17.77■□□□□ 0.44
SMARCAL1-209ENST00000444508 ARHGAP12Q8IWW6 846 aa17.77■□□□□ 0.44
SMARCAL1-209ENST00000444508 RHOT1Q8IXI2 618 aa17.77■□□□□ 0.44
SMARCAL1-209ENST00000444508 RYBPQ8N488 228 aaPredicted RBP17.77■□□□□ 0.44
SMARCAL1-209ENST00000444508 HDDC3Q8N4P3 179 aa17.77■□□□□ 0.44
SMARCAL1-209ENST00000444508 CHST14Q8NCH0 376 aa17.77■□□□□ 0.44
SMARCAL1-209ENST00000444508 TMIEQ8NEW7 156 aa17.77■□□□□ 0.44
SMARCAL1-209ENST00000444508 CADM4Q8NFZ8 388 aa17.77■□□□□ 0.44
SMARCAL1-209ENST00000444508 HSPA12BQ96MM6 686 aa17.77■□□□□ 0.44
SMARCAL1-209ENST00000444508 TM6SF2Q9BZW4 377 aa17.77■□□□□ 0.44
SMARCAL1-209ENST00000444508 PCED1AQ9H1Q7 454 aa17.77■□□□□ 0.44
SMARCAL1-209ENST00000444508 DYRK4Q9NR20 520 aa17.77■□□□□ 0.44
SMARCAL1-209ENST00000444508 ETNK2Q9NVF9 386 aa17.77■□□□□ 0.44
SMARCAL1-209ENST00000444508 IL36AQ9UHA7 158 aa17.77■□□□□ 0.44
SMARCAL1-209ENST00000444508 REXO2Q9Y3B8 237 aaKnown RBP17.77■□□□□ 0.44
SMARCAL1-209ENST00000444508 RALGAPA1Q6GYQ0 2036 aa17.77■□□□□ 0.43
SMARCAL1-209ENST00000444508 LRRD1A4D1F6 860 aa17.76■□□□□ 0.43
SMARCAL1-209ENST00000444508 MEI4A8MW99 385 aa17.76■□□□□ 0.43
SMARCAL1-209ENST00000444508 ZNF821O75541 412 aaPredicted RBP17.76■□□□□ 0.43
SMARCAL1-209ENST00000444508 SEMA4FO95754 770 aa17.76■□□□□ 0.43
SMARCAL1-209ENST00000444508 GSRP00390 522 aa17.76■□□□□ 0.43
SMARCAL1-209ENST00000444508 KDELR1P24390 212 aa17.76■□□□□ 0.43
SMARCAL1-209ENST00000444508 IL4RP24394 825 aa17.76■□□□□ 0.43
SMARCAL1-209ENST00000444508 ACSL1P33121 698 aa17.76■□□□□ 0.43
SMARCAL1-209ENST00000444508 CCNHP51946 323 aaPredicted RBP17.76■□□□□ 0.43
SMARCAL1-209ENST00000444508 RHOAP61586 193 aa17.76■□□□□ 0.43
SMARCAL1-209ENST00000444508 MMRN1Q13201 1228 aa17.76■□□□□ 0.43
SMARCAL1-209ENST00000444508 ANKRD20A8PQ5CZ79 823 aa17.76■□□□□ 0.43
SMARCAL1-209ENST00000444508 WDR45BQ5MNZ6 344 aa17.76■□□□□ 0.43
SMARCAL1-209ENST00000444508 C11orf63Q6NUN7 778 aa17.76■□□□□ 0.43
SMARCAL1-209ENST00000444508 PLPP6Q8IY26 295 aa17.76■□□□□ 0.43
SMARCAL1-209ENST00000444508 AADATQ8N5Z0 425 aa17.76■□□□□ 0.43
SMARCAL1-209ENST00000444508 NETO2Q8NC67 525 aa17.76■□□□□ 0.43
SMARCAL1-209ENST00000444508 OR2AP1Q8NGE2 309 aa17.76■□□□□ 0.43
SMARCAL1-209ENST00000444508 GRIN3AQ8TCU5 1115 aa17.76■□□□□ 0.43
SMARCAL1-209ENST00000444508 PIGKQ92643 395 aa17.76■□□□□ 0.43
SMARCAL1-209ENST00000444508 ZNF419Q96HQ0 510 aaPredicted RBP17.76■□□□□ 0.43
SMARCAL1-209ENST00000444508 PPP1R16AQ96I34 528 aa17.76■□□□□ 0.43
SMARCAL1-209ENST00000444508 GDAP1L1Q96MZ0 367 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms