RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 NDE1Q9NXR1 346 aa10.76□□□□□ -0.69
TOP3B-210ENST00000444502 GOLGA8QA0A0J9YX86 632 aa10.76□□□□□ -0.69
TOP3B-210ENST00000444502 GOLGA8OA6NCC3 632 aa10.76□□□□□ -0.69
TOP3B-210ENST00000444502 GOLGA8NF8WBI6 632 aa10.76□□□□□ -0.69
TOP3B-210ENST00000444502 XYLBO75191 536 aa10.76□□□□□ -0.69
TOP3B-210ENST00000444502 TPBGLP0DKB5 382 aa10.76□□□□□ -0.69
TOP3B-210ENST00000444502 GRIA1P42261 906 aa10.76□□□□□ -0.69
TOP3B-210ENST00000444502 NR2C2P49116 596 aa10.76□□□□□ -0.69
TOP3B-210ENST00000444502 GLUD2P49448 558 aa10.76□□□□□ -0.69
TOP3B-210ENST00000444502 ZNF132P52740 706 aa10.76□□□□□ -0.69
TOP3B-210ENST00000444502 MGAT5Q09328 741 aa10.76□□□□□ -0.69
TOP3B-210ENST00000444502 TBL3Q12788 808 aaKnown RBP10.76□□□□□ -0.69
TOP3B-210ENST00000444502 TCEA2Q15560 299 aa10.76□□□□□ -0.69
TOP3B-210ENST00000444502 TTC23LQ6PF05 361 aa10.76□□□□□ -0.69
TOP3B-210ENST00000444502 DNAJC14Q6Y2X3 702 aaPredicted RBP10.76□□□□□ -0.69
TOP3B-210ENST00000444502 SZRD1Q7Z422 152 aa10.76□□□□□ -0.69
TOP3B-210ENST00000444502 PTAR1Q7Z6K3 402 aaPredicted RBP10.76□□□□□ -0.69
TOP3B-210ENST00000444502 POU5F2Q8N7G0 328 aa10.76□□□□□ -0.69
TOP3B-210ENST00000444502 LPCAT1Q8NF37 534 aa10.76□□□□□ -0.69
TOP3B-210ENST00000444502 SCAMP5Q8TAC9 235 aa10.76□□□□□ -0.69
TOP3B-210ENST00000444502 CASP10Q92851 521 aa10.76□□□□□ -0.69
TOP3B-210ENST00000444502 PEBP4Q96S96 227 aa10.76□□□□□ -0.69
TOP3B-210ENST00000444502 KCTD15Q96SI1 283 aaPredicted RBP10.76□□□□□ -0.69
TOP3B-210ENST00000444502 ASAH2Q9NR71 780 aa10.76□□□□□ -0.69
TOP3B-210ENST00000444502 TMPRSS4Q9NRS4 437 aa10.76□□□□□ -0.69
TOP3B-210ENST00000444502 MSRAQ9UJ68 235 aa10.76□□□□□ -0.69
TOP3B-210ENST00000444502 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.76□□□□□ -0.69
TOP3B-210ENST00000444502 CDK5RAP2Q96SN8 1893 aa10.76□□□□□ -0.69
TOP3B-210ENST00000444502 MEIS3P2A8K0S8 358 aa10.75□□□□□ -0.69
TOP3B-210ENST00000444502 BOLA2-SMG1P6H3BVE0 249 aa10.75□□□□□ -0.69
TOP3B-210ENST00000444502 EDF1O60869 148 aaKnown RBP10.75□□□□□ -0.69
TOP3B-210ENST00000444502 BST1Q10588 318 aa10.75□□□□□ -0.69
TOP3B-210ENST00000444502 ANGPTL8Q6UXH0 198 aa10.75□□□□□ -0.69
TOP3B-210ENST00000444502 RGS9BPQ6ZS82 235 aa10.75□□□□□ -0.69
TOP3B-210ENST00000444502 ZNF554Q86TJ5 538 aa10.75□□□□□ -0.69
TOP3B-210ENST00000444502 SCUBE1Q8IWY4 988 aa10.75□□□□□ -0.69
TOP3B-210ENST00000444502 ARNTL2Q8WYA1 636 aa10.75□□□□□ -0.69
TOP3B-210ENST00000444502 P2RY11Q96G91 374 aa10.75□□□□□ -0.69
TOP3B-210ENST00000444502 GMIPQ9P107 970 aa10.75□□□□□ -0.69
TOP3B-210ENST00000444502 RREB1Q92766 1687 aa10.75□□□□□ -0.69
TOP3B-210ENST00000444502 THSD7AQ9UPZ6 1657 aa10.75□□□□□ -0.69
TOP3B-210ENST00000444502 C5orf60A6NFR6 353 aa10.75□□□□□ -0.69
TOP3B-210ENST00000444502 GLRA3O75311 464 aa10.75□□□□□ -0.69
TOP3B-210ENST00000444502 CHEK2O96017 543 aa10.75□□□□□ -0.69
TOP3B-210ENST00000444502 SLC5A3P53794 718 aa10.75□□□□□ -0.69
TOP3B-210ENST00000444502 MTTPP55157 894 aa10.75□□□□□ -0.69
TOP3B-210ENST00000444502 CCDC15Q0P6D6 951 aa10.75□□□□□ -0.69
TOP3B-210ENST00000444502 MED21Q13503 144 aa10.75□□□□□ -0.69
TOP3B-210ENST00000444502 EML3Q32P44 896 aa10.75□□□□□ -0.69
TOP3B-210ENST00000444502 DRICH1Q6PGQ1 229 aaPredicted RBP10.75□□□□□ -0.69
TOP3B-210ENST00000444502 ANKRD27Q96NW4 1050 aa10.75□□□□□ -0.69
TOP3B-210ENST00000444502 EBNA1BP2Q99848 306 aaKnown RBP10.75□□□□□ -0.69
TOP3B-210ENST00000444502 BCO2Q9BYV7 579 aa10.75□□□□□ -0.69
TOP3B-210ENST00000444502 EPB41L4BQ9H329 900 aa10.75□□□□□ -0.69
TOP3B-210ENST00000444502 MRGBPQ9NV56 204 aa10.75□□□□□ -0.69
TOP3B-210ENST00000444502 TBC1D13Q9NVG8 400 aa10.75□□□□□ -0.69
TOP3B-210ENST00000444502 SNX10Q9Y5X0 201 aa10.75□□□□□ -0.69
TOP3B-210ENST00000444502 A0A1W2PQH9 124 aa10.75□□□□□ -0.69
TOP3B-210ENST00000444502 KPNA3O00505 521 aaPredicted RBP10.75□□□□□ -0.69
TOP3B-210ENST00000444502 AIM2O14862 343 aa10.75□□□□□ -0.69
TOP3B-210ENST00000444502 MFSD11O43934 449 aa10.75□□□□□ -0.69
TOP3B-210ENST00000444502 SERPINF2P08697 491 aa10.75□□□□□ -0.69
TOP3B-210ENST00000444502 CSH1P0DML2 217 aa10.75□□□□□ -0.69
TOP3B-210ENST00000444502 CSH2P0DML3 217 aa10.75□□□□□ -0.69
TOP3B-210ENST00000444502 CLCN2P51788 898 aa10.75□□□□□ -0.69
TOP3B-210ENST00000444502 GEMP55040 296 aa10.75□□□□□ -0.69
TOP3B-210ENST00000444502 PRMT2P55345 433 aa10.75□□□□□ -0.69
TOP3B-210ENST00000444502 CLDN10P78369 228 aa10.75□□□□□ -0.69
TOP3B-210ENST00000444502 CCDC142Q17RM4 750 aa10.75□□□□□ -0.69
TOP3B-210ENST00000444502 TRMT10BQ6PF06 316 aaKnown RBP10.75□□□□□ -0.69
TOP3B-210ENST00000444502 RHBDF2Q6PJF5 856 aa10.75□□□□□ -0.69
TOP3B-210ENST00000444502 UNC5AQ6ZN44 842 aa10.75□□□□□ -0.69
TOP3B-210ENST00000444502 NPAS4Q8IUM7 802 aa10.75□□□□□ -0.69
TOP3B-210ENST00000444502 NAT16Q8N8M0 369 aa10.75□□□□□ -0.69
TOP3B-210ENST00000444502 FCRL2Q96LA5 508 aaPredicted RBP10.75□□□□□ -0.69
TOP3B-210ENST00000444502 SCUBE2Q9NQ36 999 aa10.75□□□□□ -0.69
TOP3B-210ENST00000444502 UTP6Q9NYH9 597 aaKnown RBP10.75□□□□□ -0.69
TOP3B-210ENST00000444502 STARD13Q9Y3M8 1113 aa10.75□□□□□ -0.69
TOP3B-210ENST00000444502 MAGEB3O15480 346 aa10.74□□□□□ -0.69
TOP3B-210ENST00000444502 UGT1A9O60656 530 aa10.74□□□□□ -0.69
TOP3B-210ENST00000444502 UNC5CO95185 931 aa10.74□□□□□ -0.69
TOP3B-210ENST00000444502 METTL18O95568 372 aa10.74□□□□□ -0.69
TOP3B-210ENST00000444502 RALBP11234 206 aa10.74□□□□□ -0.69
TOP3B-210ENST00000444502 VAV1P15498 845 aa10.74□□□□□ -0.69
TOP3B-210ENST00000444502 TFE3P19532 575 aaPredicted RBP10.74□□□□□ -0.69
TOP3B-210ENST00000444502 PCYT1AP49585 367 aa10.74□□□□□ -0.69
TOP3B-210ENST00000444502 PSMD7P51665 324 aa10.74□□□□□ -0.69
TOP3B-210ENST00000444502 SDE2Q6IQ49 451 aa10.74□□□□□ -0.69
TOP3B-210ENST00000444502 RETSATQ6NUM9 610 aa10.74□□□□□ -0.69
TOP3B-210ENST00000444502 ACAD11Q709F0 780 aa10.74□□□□□ -0.69
TOP3B-210ENST00000444502 PIGWQ7Z7B1 504 aa10.74□□□□□ -0.69
TOP3B-210ENST00000444502 DDIASQ8IXT1 998 aa10.74□□□□□ -0.69
TOP3B-210ENST00000444502 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.74□□□□□ -0.69
TOP3B-210ENST00000444502 RFWD2Q8NHY2 731 aa10.74□□□□□ -0.69
TOP3B-210ENST00000444502 MTBPQ96DY7 904 aa10.74□□□□□ -0.69
TOP3B-210ENST00000444502 FAM192AQ9GZU8 254 aa10.74□□□□□ -0.69
TOP3B-210ENST00000444502 UGT1A7Q9HAW7 530 aa10.74□□□□□ -0.69
TOP3B-210ENST00000444502 UGT1A10Q9HAW8 530 aa10.74□□□□□ -0.69
TOP3B-210ENST00000444502 UGT1A8Q9HAW9 530 aa10.74□□□□□ -0.69
TOP3B-210ENST00000444502 CNGB3Q9NQW8 809 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms