RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 MAT2AP31153 395 aaKnown RBP11.11□□□□□ -0.63
SF3A1-203ENST00000444440 CHRNA3P32297 505 aa11.11□□□□□ -0.63
SF3A1-203ENST00000444440 SERPINH1P50454 418 aaKnown RBP11.11□□□□□ -0.63
SF3A1-203ENST00000444440 CCR5P51681 352 aa11.11□□□□□ -0.63
SF3A1-203ENST00000444440 KRT83P78385 493 aa11.11□□□□□ -0.63
SF3A1-203ENST00000444440 C1QBPQ07021 282 aaKnown RBP11.11□□□□□ -0.63
SF3A1-203ENST00000444440 ZNF423Q2M1K9 1284 aa11.11□□□□□ -0.63
SF3A1-203ENST00000444440 ARSIQ5FYB1 569 aa11.11□□□□□ -0.63
SF3A1-203ENST00000444440 C6orf118Q5T5N4 469 aa11.11□□□□□ -0.63
SF3A1-203ENST00000444440 DNAJC24Q6P3W2 148 aa11.11□□□□□ -0.63
SF3A1-203ENST00000444440 LEKR1Q6ZMV7 388 aa11.11□□□□□ -0.63
SF3A1-203ENST00000444440 DPY19L3Q6ZPD9 716 aa11.11□□□□□ -0.63
SF3A1-203ENST00000444440 ZNF571Q7Z3V5 609 aaPredicted RBP11.11□□□□□ -0.63
SF3A1-203ENST00000444440 SLCO6A1Q86UG4 719 aa11.11□□□□□ -0.63
SF3A1-203ENST00000444440 LUZP1Q86V48 1076 aa11.11□□□□□ -0.63
SF3A1-203ENST00000444440 ARFGAP1Q8N6T3 406 aa11.11□□□□□ -0.63
SF3A1-203ENST00000444440 PNPLA1Q8N8W4 532 aa11.11□□□□□ -0.63
SF3A1-203ENST00000444440 GRIN3AQ8TCU5 1115 aa11.11□□□□□ -0.63
SF3A1-203ENST00000444440 ARHGEF2Q92974 986 aaKnown RBP11.11□□□□□ -0.63
SF3A1-203ENST00000444440 SPON2Q9BUD6 331 aa11.11□□□□□ -0.63
SF3A1-203ENST00000444440 OSBPL2Q9H1P3 480 aa11.11□□□□□ -0.63
SF3A1-203ENST00000444440 CBX8Q9HC52 389 aa11.11□□□□□ -0.63
SF3A1-203ENST00000444440 TMEM248Q9NWD8 314 aa11.11□□□□□ -0.63
SF3A1-203ENST00000444440 GPATCH2LQ9NWQ4 482 aa11.11□□□□□ -0.63
SF3A1-203ENST00000444440 TOR4AQ9NXH8 423 aa11.11□□□□□ -0.63
SF3A1-203ENST00000444440 KLK13Q9UKR3 277 aa11.11□□□□□ -0.63
SF3A1-203ENST00000444440 GOLGA4Q13439 2230 aaKnown RBP11.11□□□□□ -0.63
SF3A1-203ENST00000444440 IGF2RP11717 2491 aa11.1□□□□□ -0.63
SF3A1-203ENST00000444440 TBC1D3DA0A087WVF3 549 aa11.1□□□□□ -0.63
SF3A1-203ENST00000444440 TBC1D3IA0A087WXS9 549 aa11.1□□□□□ -0.63
SF3A1-203ENST00000444440 TBC1D3EA0A087X179 549 aa11.1□□□□□ -0.63
SF3A1-203ENST00000444440 TBC1D3KA0A087X1G2 549 aa11.1□□□□□ -0.63
SF3A1-203ENST00000444440 TBC1D3FA6NER0 549 aaPredicted RBP11.1□□□□□ -0.63
SF3A1-203ENST00000444440 TBC1D3LB9A6J9 549 aa11.1□□□□□ -0.63
SF3A1-203ENST00000444440 DDX3XO00571 662 aaKnown RBP eCLIP11.1□□□□□ -0.63
SF3A1-203ENST00000444440 VILLO15195 856 aa11.1□□□□□ -0.63
SF3A1-203ENST00000444440 KRT37O76014 449 aa11.1□□□□□ -0.63
SF3A1-203ENST00000444440 TBC1D3HP0C7X1 549 aa11.1□□□□□ -0.63
SF3A1-203ENST00000444440 FTH1P19P0C7X4 201 aa11.1□□□□□ -0.63
SF3A1-203ENST00000444440 SKILP12757 684 aa11.1□□□□□ -0.63
SF3A1-203ENST00000444440 RHOQP17081 205 aa11.1□□□□□ -0.63
SF3A1-203ENST00000444440 GKP32189 559 aa11.1□□□□□ -0.63
SF3A1-203ENST00000444440 PBX1P40424 430 aa11.1□□□□□ -0.63
SF3A1-203ENST00000444440 ZNF143P52747 638 aaPredicted RBP11.1□□□□□ -0.63
SF3A1-203ENST00000444440 RACK1P63244 317 aaKnown RBP11.1□□□□□ -0.63
SF3A1-203ENST00000444440 SCAPQ12770 1279 aa11.1□□□□□ -0.63
SF3A1-203ENST00000444440 NR1I3Q14994 352 aa11.1□□□□□ -0.63
SF3A1-203ENST00000444440 TRIP6Q15654 476 aaKnown RBP11.1□□□□□ -0.63
SF3A1-203ENST00000444440 CA9Q16790 459 aa11.1□□□□□ -0.63
SF3A1-203ENST00000444440 TBC1D3GQ6DHY5 549 aa11.1□□□□□ -0.63
SF3A1-203ENST00000444440 TBC1D3CQ6IPX1 549 aa11.1□□□□□ -0.63
SF3A1-203ENST00000444440 RWDD4Q6NW29 188 aaKnown RBP11.1□□□□□ -0.63
SF3A1-203ENST00000444440 ZNF783Q6ZMS7 281 aa11.1□□□□□ -0.63
SF3A1-203ENST00000444440 CYP4V2Q6ZWL3 525 aaPredicted RBP11.1□□□□□ -0.63
SF3A1-203ENST00000444440 SPATS2Q86XZ4 545 aaKnown RBP11.1□□□□□ -0.63
SF3A1-203ENST00000444440 GATAD2AQ86YP4 633 aa11.1□□□□□ -0.63
SF3A1-203ENST00000444440 TBC1D3Q8IZP1 549 aaPredicted RBP11.1□□□□□ -0.63
SF3A1-203ENST00000444440 CHCHD4Q8N4Q1 142 aa11.1□□□□□ -0.63
SF3A1-203ENST00000444440 OR6K2Q8NGY2 324 aa11.1□□□□□ -0.63
SF3A1-203ENST00000444440 KLK6Q92876 244 aa11.1□□□□□ -0.63
SF3A1-203ENST00000444440 GATA6Q92908 595 aa11.1□□□□□ -0.63
SF3A1-203ENST00000444440 NTAN1Q96AB6 310 aa11.1□□□□□ -0.63
SF3A1-203ENST00000444440 TBC1D31Q96DN5 1066 aa11.1□□□□□ -0.63
SF3A1-203ENST00000444440 SERAC1Q96JX3 654 aa11.1□□□□□ -0.63
SF3A1-203ENST00000444440 PEBP4Q96S96 227 aa11.1□□□□□ -0.63
SF3A1-203ENST00000444440 PPP1R9BQ96SB3 815 aa11.1□□□□□ -0.63
SF3A1-203ENST00000444440 MYOCQ99972 504 aa11.1□□□□□ -0.63
SF3A1-203ENST00000444440 TM6SF2Q9BZW4 377 aa11.1□□□□□ -0.63
SF3A1-203ENST00000444440 HAUS4Q9H6D7 363 aa11.1□□□□□ -0.63
SF3A1-203ENST00000444440 FZD3Q9NPG1 666 aa11.1□□□□□ -0.63
SF3A1-203ENST00000444440 AASDHPPTQ9NRN7 309 aa11.1□□□□□ -0.63
SF3A1-203ENST00000444440 FZD10Q9ULW2 581 aa11.1□□□□□ -0.63
SF3A1-203ENST00000444440 ZFR2Q9UPR6 939 aaKnown RBP11.1□□□□□ -0.63
SF3A1-203ENST00000444440 A0A1W2PQC6 194 aa11.09□□□□□ -0.63
SF3A1-203ENST00000444440 C1QTNF3-AMACRE9PGA6 284 aa11.09□□□□□ -0.63
SF3A1-203ENST00000444440 GOLGA6L19H0YKK7 550 aa11.09□□□□□ -0.63
SF3A1-203ENST00000444440 KPNA3O00505 521 aaPredicted RBP11.09□□□□□ -0.63
SF3A1-203ENST00000444440 LEFTY1O75610 366 aa11.09□□□□□ -0.63
SF3A1-203ENST00000444440 CCDC172P0C7W6 258 aa11.09□□□□□ -0.63
SF3A1-203ENST00000444440 TNFAIP3P21580 790 aa11.09□□□□□ -0.63
SF3A1-203ENST00000444440 CD38P28907 300 aa11.09□□□□□ -0.63
SF3A1-203ENST00000444440 PRKCIP41743 596 aa11.09□□□□□ -0.63
SF3A1-203ENST00000444440 CCNHP51946 323 aaPredicted RBP11.09□□□□□ -0.63
SF3A1-203ENST00000444440 MAMLD1Q13495 774 aa11.09□□□□□ -0.63
SF3A1-203ENST00000444440 TEAD4Q15561 434 aa11.09□□□□□ -0.63
SF3A1-203ENST00000444440 ASIC2Q16515 512 aa11.09□□□□□ -0.63
SF3A1-203ENST00000444440 ACBD5Q5T8D3 534 aaPredicted RBP11.09□□□□□ -0.63
SF3A1-203ENST00000444440 PLEKHA7Q6IQ23 1121 aa11.09□□□□□ -0.63
SF3A1-203ENST00000444440 SCYL2Q6P3W7 929 aa11.09□□□□□ -0.63
SF3A1-203ENST00000444440 IL27RAQ6UWB1 636 aa11.09□□□□□ -0.63
SF3A1-203ENST00000444440 RAB44Q7Z6P3 723 aaPredicted RBP11.09□□□□□ -0.63
SF3A1-203ENST00000444440 ADAT2Q7Z6V5 191 aaKnown RBP11.09□□□□□ -0.63
SF3A1-203ENST00000444440 SLFN11Q7Z7L1 901 aa11.09□□□□□ -0.63
SF3A1-203ENST00000444440 DSG4Q86SJ6 1040 aa11.09□□□□□ -0.63
SF3A1-203ENST00000444440 TRIM69Q86WT6 500 aa11.09□□□□□ -0.63
SF3A1-203ENST00000444440 TMIEQ8NEW7 156 aa11.09□□□□□ -0.63
SF3A1-203ENST00000444440 SETD7Q8WTS6 366 aaKnown RBP11.09□□□□□ -0.63
SF3A1-203ENST00000444440 KDM4CQ9H3R0 1056 aa11.09□□□□□ -0.63
SF3A1-203ENST00000444440 AIPL1Q9NZN9 384 aa11.09□□□□□ -0.63
SF3A1-203ENST00000444440 IL36AQ9UHA7 158 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms