RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 TMIEQ8NEW7 156 aa20.5■□□□□ 0.87
LRCH3-208ENST00000443727 PPP1R16AQ96I34 528 aa20.5■□□□□ 0.87
LRCH3-208ENST00000443727 EPAS1Q99814 870 aa20.5■□□□□ 0.87
LRCH3-208ENST00000443727 MAGEH1Q9H213 219 aa20.5■□□□□ 0.87
LRCH3-208ENST00000443727 HAUS4Q9H6D7 363 aa20.5■□□□□ 0.87
LRCH3-208ENST00000443727 CBX8Q9HC52 389 aa20.5■□□□□ 0.87
LRCH3-208ENST00000443727 PARVAQ9NVD7 372 aa20.5■□□□□ 0.87
LRCH3-208ENST00000443727 TMEM248Q9NWD8 314 aa20.5■□□□□ 0.87
LRCH3-208ENST00000443727 PCDHGB2Q9Y5G2 931 aa20.5■□□□□ 0.87
LRCH3-208ENST00000443727 NYNRINQ9P2P1 1898 aaKnown RBP20.5■□□□□ 0.87
LRCH3-208ENST00000443727 KNL1Q8NG31 2342 aa20.49■□□□□ 0.87
LRCH3-208ENST00000443727 PCNX2A6NKB5 2137 aa20.49■□□□□ 0.87
LRCH3-208ENST00000443727 GOLGA6L19H0YKK7 550 aa20.49■□□□□ 0.87
LRCH3-208ENST00000443727 FLRT2O43155 660 aa20.49■□□□□ 0.87
LRCH3-208ENST00000443727 CREB3O43889 395 aa20.49■□□□□ 0.87
LRCH3-208ENST00000443727 DFNA5O60443 496 aa20.49■□□□□ 0.87
LRCH3-208ENST00000443727 SPINK2P20155 84 aa20.49■□□□□ 0.87
LRCH3-208ENST00000443727 PTMSP20962 102 aa20.49■□□□□ 0.87
LRCH3-208ENST00000443727 EPHB2P29323 1055 aa20.49■□□□□ 0.87
LRCH3-208ENST00000443727 L1CAMP32004 1257 aa20.49■□□□□ 0.87
LRCH3-208ENST00000443727 CCT8P50990 548 aa20.49■□□□□ 0.87
LRCH3-208ENST00000443727 ARF5P84085 180 aa20.49■□□□□ 0.87
LRCH3-208ENST00000443727 KLHL30Q0D2K2 578 aa20.49■□□□□ 0.87
LRCH3-208ENST00000443727 NR1I3Q14994 352 aa20.49■□□□□ 0.87
LRCH3-208ENST00000443727 POLD3Q15054 466 aaPredicted RBP20.49■□□□□ 0.87
LRCH3-208ENST00000443727 KCNT1Q5JUK3 1230 aa20.49■□□□□ 0.87
LRCH3-208ENST00000443727 DPY19L3Q6ZPD9 716 aa20.49■□□□□ 0.87
LRCH3-208ENST00000443727 TMC6Q7Z403 805 aa20.49■□□□□ 0.87
LRCH3-208ENST00000443727 LUZP1Q86V48 1076 aa20.49■□□□□ 0.87
LRCH3-208ENST00000443727 NLRP14Q86W24 1093 aa20.49■□□□□ 0.87
LRCH3-208ENST00000443727 PYROXD2Q8N2H3 581 aa20.49■□□□□ 0.87
LRCH3-208ENST00000443727 RYBPQ8N488 228 aaPredicted RBP20.49■□□□□ 0.87
LRCH3-208ENST00000443727 PCDH20Q8N6Y1 951 aaKnown RBP20.49■□□□□ 0.87
LRCH3-208ENST00000443727 RHBDD1Q8TEB9 315 aa20.49■□□□□ 0.87
LRCH3-208ENST00000443727 FAM131CQ96AQ9 280 aa20.49■□□□□ 0.87
LRCH3-208ENST00000443727 PREBQ9HCU5 417 aa20.49■□□□□ 0.87
LRCH3-208ENST00000443727 NDFIP2Q9NV92 336 aa20.49■□□□□ 0.87
LRCH3-208ENST00000443727 AIPL1Q9NZN9 384 aa20.49■□□□□ 0.87
LRCH3-208ENST00000443727 PCOLCE2Q9UKZ9 415 aa20.49■□□□□ 0.87
LRCH3-208ENST00000443727 FCF1Q9Y324 198 aaKnown RBP20.49■□□□□ 0.87
LRCH3-208ENST00000443727 H0Y8X5 98 aa20.48■□□□□ 0.87
LRCH3-208ENST00000443727 LATO43561 262 aa20.48■□□□□ 0.87
LRCH3-208ENST00000443727 TRIM16O95361 564 aa20.48■□□□□ 0.87
LRCH3-208ENST00000443727 TOP3BO95985 862 aaKnown RBP20.48■□□□□ 0.87
LRCH3-208ENST00000443727 PSMA2P25787 234 aa20.48■□□□□ 0.87
LRCH3-208ENST00000443727 NUDT1P36639 197 aa20.48■□□□□ 0.87
LRCH3-208ENST00000443727 IL9RQ01113 521 aa20.48■□□□□ 0.87
LRCH3-208ENST00000443727 MAMLD1Q13495 774 aa20.48■□□□□ 0.87
LRCH3-208ENST00000443727 ZNF423Q2M1K9 1284 aa20.48■□□□□ 0.87
LRCH3-208ENST00000443727 SETMARQ53H47 684 aaPredicted RBP20.48■□□□□ 0.87
LRCH3-208ENST00000443727 CARD16Q5EG05 197 aa20.48■□□□□ 0.87
LRCH3-208ENST00000443727 PPP1R15BQ5SWA1 713 aa20.48■□□□□ 0.87
LRCH3-208ENST00000443727 NAPEPLDQ6IQ20 393 aa20.48■□□□□ 0.87
LRCH3-208ENST00000443727 TRIM69Q86WT6 500 aa20.48■□□□□ 0.87
LRCH3-208ENST00000443727 ARHGEF2Q92974 986 aaKnown RBP20.48■□□□□ 0.87
LRCH3-208ENST00000443727 SYT11Q9BT88 431 aa20.48■□□□□ 0.87
LRCH3-208ENST00000443727 SCNM1Q9BWG6 230 aa20.48■□□□□ 0.87
LRCH3-208ENST00000443727 EDEM3Q9BZQ6 932 aa20.48■□□□□ 0.87
LRCH3-208ENST00000443727 GDF3Q9NR23 364 aa20.48■□□□□ 0.87
LRCH3-208ENST00000443727 FZD10Q9ULW2 581 aa20.48■□□□□ 0.87
LRCH3-208ENST00000443727 DOCK4Q8N1I0 1966 aa20.47■□□□□ 0.87
LRCH3-208ENST00000443727 ATMINO43313 823 aaPredicted RBP20.47■□□□□ 0.87
LRCH3-208ENST00000443727 HYAL3O43820 417 aaPredicted RBP20.47■□□□□ 0.87
LRCH3-208ENST00000443727 RNGTTO60942 597 aaKnown RBP20.47■□□□□ 0.87
LRCH3-208ENST00000443727 LEFTY1O75610 366 aa20.47■□□□□ 0.87
LRCH3-208ENST00000443727 FTLP02792 175 aaPredicted RBP20.47■□□□□ 0.87
LRCH3-208ENST00000443727 AIF1P55008 147 aa20.47■□□□□ 0.87
LRCH3-208ENST00000443727 FANCCQ00597 558 aa20.47■□□□□ 0.87
LRCH3-208ENST00000443727 STAT4Q14765 748 aa20.47■□□□□ 0.87
LRCH3-208ENST00000443727 PIP5KL1Q5T9C9 394 aa20.47■□□□□ 0.87
LRCH3-208ENST00000443727 ERN2Q76MJ5 926 aaKnown RBP20.47■□□□□ 0.87
LRCH3-208ENST00000443727 ZNF571Q7Z3V5 609 aaPredicted RBP20.47■□□□□ 0.87
LRCH3-208ENST00000443727 ARRDC3Q96B67 414 aa20.47■□□□□ 0.87
LRCH3-208ENST00000443727 CDC6Q99741 560 aa20.47■□□□□ 0.87
LRCH3-208ENST00000443727 HEPHQ9BQS7 1158 aa20.47■□□□□ 0.87
LRCH3-208ENST00000443727 TM6SF2Q9BZW4 377 aa20.47■□□□□ 0.87
LRCH3-208ENST00000443727 CATSPERBQ9H7T0 1116 aa20.47■□□□□ 0.87
LRCH3-208ENST00000443727 NEU3Q9UQ49 428 aa20.47■□□□□ 0.87
LRCH3-208ENST00000443727 DMTF1Q9Y222 760 aa20.47■□□□□ 0.87
LRCH3-208ENST00000443727 APOBEC2Q9Y235 224 aaKnown RBP20.47■□□□□ 0.87
LRCH3-208ENST00000443727 ACTL7AQ9Y615 435 aa20.47■□□□□ 0.87
LRCH3-208ENST00000443727 EPG5Q9HCE0 2579 aa20.46■□□□□ 0.87
LRCH3-208ENST00000443727 WNT9AO14904 365 aa20.46■□□□□ 0.87
LRCH3-208ENST00000443727 BUB1O43683 1085 aa20.46■□□□□ 0.87
LRCH3-208ENST00000443727 ZNF821O75541 412 aaPredicted RBP20.46■□□□□ 0.87
LRCH3-208ENST00000443727 PCDH8O95206 1070 aa20.46■□□□□ 0.87
LRCH3-208ENST00000443727 WNT1P04628 370 aa20.46■□□□□ 0.87
LRCH3-208ENST00000443727 SKILP12757 684 aa20.46■□□□□ 0.87
LRCH3-208ENST00000443727 PRKCIP41743 596 aa20.46■□□□□ 0.87
LRCH3-208ENST00000443727 CCNHP51946 323 aaPredicted RBP20.46■□□□□ 0.87
LRCH3-208ENST00000443727 UBASH3AP57075 661 aa20.46■□□□□ 0.87
LRCH3-208ENST00000443727 INAVAQ3KP66 663 aa20.46■□□□□ 0.87
LRCH3-208ENST00000443727 PRAMEF14Q5SWL7 426 aa20.46■□□□□ 0.87
LRCH3-208ENST00000443727 LEKR1Q6ZMV7 388 aa20.46■□□□□ 0.87
LRCH3-208ENST00000443727 RTL3Q8N8U3 475 aaKnown RBP20.46■□□□□ 0.87
LRCH3-208ENST00000443727 ELF4Q99607 663 aaPredicted RBP20.46■□□□□ 0.87
LRCH3-208ENST00000443727 HDAC8Q9BY41 377 aa20.46■□□□□ 0.87
LRCH3-208ENST00000443727 ZDHHC6Q9H6R6 413 aa20.46■□□□□ 0.87
LRCH3-208ENST00000443727 HECAQ9UBI9 543 aaPredicted RBP20.46■□□□□ 0.87
LRCH3-208ENST00000443727 CXorf51AA0A1B0GTR3 108 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms