RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 SNRPD1P62314 119 aaKnown RBP11.04□□□□□ -0.64
HDAC6-211ENST00000443563 RPL6Q02878 288 aaKnown RBP11.04□□□□□ -0.64
HDAC6-211ENST00000443563 IL10RBQ08334 325 aa11.04□□□□□ -0.64
HDAC6-211ENST00000443563 RFTN1Q14699 578 aaPredicted RBP11.04□□□□□ -0.64
HDAC6-211ENST00000443563 ATP13A4Q4VNC1 1196 aa11.04□□□□□ -0.64
HDAC6-211ENST00000443563 ANKRD20A8PQ5CZ79 823 aa11.04□□□□□ -0.64
HDAC6-211ENST00000443563 CARD16Q5EG05 197 aa11.04□□□□□ -0.64
HDAC6-211ENST00000443563 AFMIDQ63HM1 303 aa11.04□□□□□ -0.64
HDAC6-211ENST00000443563 PMS2CLQ68D20 193 aa11.04□□□□□ -0.64
HDAC6-211ENST00000443563 MMAAQ8IVH4 418 aaKnown RBP11.04□□□□□ -0.64
HDAC6-211ENST00000443563 SYCE1Q8N0S2 351 aa11.04□□□□□ -0.64
HDAC6-211ENST00000443563 FAM160A2Q8N612 972 aaPredicted RBP11.04□□□□□ -0.64
HDAC6-211ENST00000443563 TMIEQ8NEW7 156 aa11.04□□□□□ -0.64
HDAC6-211ENST00000443563 OR2A12Q8NGT7 310 aa11.04□□□□□ -0.64
HDAC6-211ENST00000443563 GANCQ8TET4 914 aa11.04□□□□□ -0.64
HDAC6-211ENST00000443563 NSMCE1Q8WV22 266 aa11.04□□□□□ -0.64
HDAC6-211ENST00000443563 UBE2Q2Q8WVN8 375 aa11.04□□□□□ -0.64
HDAC6-211ENST00000443563 RUBCNQ92622 972 aa11.04□□□□□ -0.64
HDAC6-211ENST00000443563 FOXJ1Q92949 421 aa11.04□□□□□ -0.64
HDAC6-211ENST00000443563 PPP1R16AQ96I34 528 aa11.04□□□□□ -0.64
HDAC6-211ENST00000443563 CELF6Q96J87 481 aaKnown RBP11.04□□□□□ -0.64
HDAC6-211ENST00000443563 ZNF599Q96NL3 588 aa11.04□□□□□ -0.64
HDAC6-211ENST00000443563 OMDQ99983 421 aa11.04□□□□□ -0.64
HDAC6-211ENST00000443563 MAK16Q9BXY0 300 aaKnown RBP11.04□□□□□ -0.64
HDAC6-211ENST00000443563 KLC2Q9H0B6 622 aa11.04□□□□□ -0.64
HDAC6-211ENST00000443563 PCED1AQ9H1Q7 454 aa11.04□□□□□ -0.64
HDAC6-211ENST00000443563 DUSP15Q9H1R2 295 aaPredicted RBP11.04□□□□□ -0.64
HDAC6-211ENST00000443563 PABPC3Q9H361 631 aaKnown RBP11.04□□□□□ -0.64
HDAC6-211ENST00000443563 MTG2Q9H4K7 406 aa11.04□□□□□ -0.64
HDAC6-211ENST00000443563 SP110Q9HB58 689 aa11.04□□□□□ -0.64
HDAC6-211ENST00000443563 SGK2Q9HBY8 427 aa11.04□□□□□ -0.64
HDAC6-211ENST00000443563 WSB2Q9NYS7 404 aaPredicted RBP11.04□□□□□ -0.64
HDAC6-211ENST00000443563 UBA2Q9UBT2 640 aaPredicted RBP11.04□□□□□ -0.64
HDAC6-211ENST00000443563 IL36AQ9UHA7 158 aa11.04□□□□□ -0.64
HDAC6-211ENST00000443563 FZD4Q9ULV1 537 aa11.04□□□□□ -0.64
HDAC6-211ENST00000443563 TFR2Q9UP52 801 aa11.04□□□□□ -0.64
HDAC6-211ENST00000443563 PCDHGA5Q9Y5G8 931 aa11.04□□□□□ -0.64
HDAC6-211ENST00000443563 LRRD1A4D1F6 860 aa11.03□□□□□ -0.64
HDAC6-211ENST00000443563 RCCD1A6NED2 376 aa11.03□□□□□ -0.64
HDAC6-211ENST00000443563 K7ERQ8 282 aa11.03□□□□□ -0.64
HDAC6-211ENST00000443563 MID1O15344 667 aa11.03□□□□□ -0.64
HDAC6-211ENST00000443563 GFRA3O60609 400 aa11.03□□□□□ -0.64
HDAC6-211ENST00000443563 LRP3O75074 770 aa11.03□□□□□ -0.64
HDAC6-211ENST00000443563 TMCC1O94876 653 aa11.03□□□□□ -0.64
HDAC6-211ENST00000443563 CD160O95971 181 aa11.03□□□□□ -0.64
HDAC6-211ENST00000443563 IGSF6O95976 241 aa11.03□□□□□ -0.64
HDAC6-211ENST00000443563 KRT1P04264 644 aa11.03□□□□□ -0.64
HDAC6-211ENST00000443563 CD48P09326 243 aa11.03□□□□□ -0.64
HDAC6-211ENST00000443563 TNNT1P13805 278 aa11.03□□□□□ -0.64
HDAC6-211ENST00000443563 VAV1P15498 845 aa11.03□□□□□ -0.64
HDAC6-211ENST00000443563 BCKDHBP21953 392 aa11.03□□□□□ -0.64
HDAC6-211ENST00000443563 CHRNA3P32297 505 aa11.03□□□□□ -0.64
HDAC6-211ENST00000443563 PSMD8P48556 350 aa11.03□□□□□ -0.64
HDAC6-211ENST00000443563 DNA2P51530 1060 aa11.03□□□□□ -0.64
HDAC6-211ENST00000443563 RAD51Q06609 339 aa11.03□□□□□ -0.64
HDAC6-211ENST00000443563 MMRN1Q13201 1228 aa11.03□□□□□ -0.64
HDAC6-211ENST00000443563 PAFAH1B3Q15102 231 aaKnown RBP11.03□□□□□ -0.64
HDAC6-211ENST00000443563 SYCP2LQ5T4T6 812 aa11.03□□□□□ -0.64
HDAC6-211ENST00000443563 ASCL5Q7RTU5 278 aa11.03□□□□□ -0.64
HDAC6-211ENST00000443563 CACUL1Q86Y37 369 aa11.03□□□□□ -0.64
HDAC6-211ENST00000443563 CPNE8Q86YQ8 564 aa11.03□□□□□ -0.64
HDAC6-211ENST00000443563 ARHGAP12Q8IWW6 846 aa11.03□□□□□ -0.64
HDAC6-211ENST00000443563 BBS5Q8N3I7 341 aa11.03□□□□□ -0.64
HDAC6-211ENST00000443563 ATPAF2Q8N5M1 289 aa11.03□□□□□ -0.64
HDAC6-211ENST00000443563 RNF10Q8N5U6 811 aaKnown RBP11.03□□□□□ -0.64
HDAC6-211ENST00000443563 GPR161Q8N6U8 529 aaKnown RBP11.03□□□□□ -0.64
HDAC6-211ENST00000443563 CADM4Q8NFZ8 388 aa11.03□□□□□ -0.64
HDAC6-211ENST00000443563 OR2AP1Q8NGE2 309 aa11.03□□□□□ -0.64
HDAC6-211ENST00000443563 KIAA1524Q8TCG1 905 aa11.03□□□□□ -0.64
HDAC6-211ENST00000443563 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.03□□□□□ -0.64
HDAC6-211ENST00000443563 FAF2Q96CS3 445 aa11.03□□□□□ -0.64
HDAC6-211ENST00000443563 TOE1Q96GM8 510 aaKnown RBP11.03□□□□□ -0.64
HDAC6-211ENST00000443563 LRIG1Q96JA1 1093 aa11.03□□□□□ -0.64
HDAC6-211ENST00000443563 ZNF830Q96NB3 372 aaPredicted RBP11.03□□□□□ -0.64
HDAC6-211ENST00000443563 HINFPQ9BQA5 517 aa11.03□□□□□ -0.64
HDAC6-211ENST00000443563 HEPHQ9BQS7 1158 aa11.03□□□□□ -0.64
HDAC6-211ENST00000443563 DESI2Q9BSY9 194 aa11.03□□□□□ -0.64
HDAC6-211ENST00000443563 LACRTQ9GZZ8 138 aa11.03□□□□□ -0.64
HDAC6-211ENST00000443563 BTBD1Q9H0C5 482 aa11.03□□□□□ -0.64
HDAC6-211ENST00000443563 TNKS2Q9H2K2 1166 aa11.03□□□□□ -0.64
HDAC6-211ENST00000443563 DYRK4Q9NR20 520 aa11.03□□□□□ -0.64
HDAC6-211ENST00000443563 KLHL11Q9NVR0 708 aa11.03□□□□□ -0.64
HDAC6-211ENST00000443563 HAUS2Q9NVX0 235 aa11.03□□□□□ -0.64
HDAC6-211ENST00000443563 FBXL12Q9NXK8 326 aa11.03□□□□□ -0.64
HDAC6-211ENST00000443563 MBD1Q9UIS9 605 aaPredicted RBP11.03□□□□□ -0.64
HDAC6-211ENST00000443563 PPM1HQ9ULR3 514 aa11.03□□□□□ -0.64
HDAC6-211ENST00000443563 FCF1Q9Y324 198 aaKnown RBP11.03□□□□□ -0.64
HDAC6-211ENST00000443563 ZFHX2Q9C0A1 2572 aaPredicted RBP11.03□□□□□ -0.64
HDAC6-211ENST00000443563 TNRC6BQ9UPQ9 1833 aaKnown RBP11.02□□□□□ -0.64
HDAC6-211ENST00000443563 CCDC66A2RUB6 948 aa11.02□□□□□ -0.65
HDAC6-211ENST00000443563 LRRC72A6NJI9 287 aa11.02□□□□□ -0.65
HDAC6-211ENST00000443563 J3KR12 359 aa11.02□□□□□ -0.65
HDAC6-211ENST00000443563 SLC7A4O43246 635 aa11.02□□□□□ -0.65
HDAC6-211ENST00000443563 FOXD2O60548 495 aaPredicted RBP11.02□□□□□ -0.65
HDAC6-211ENST00000443563 PALMO75781 387 aa11.02□□□□□ -0.65
HDAC6-211ENST00000443563 RNASEH2AO75792 299 aaKnown RBP11.02□□□□□ -0.65
HDAC6-211ENST00000443563 EPN2O95208 641 aa11.02□□□□□ -0.65
HDAC6-211ENST00000443563 ZRANB2O95218 330 aaKnown RBP eCLIP11.02□□□□□ -0.65
HDAC6-211ENST00000443563 POP4O95707 220 aaKnown RBP11.02□□□□□ -0.65
HDAC6-211ENST00000443563 CCDC175P0C221 793 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms