RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 RCOR3Q9P2K3 495 aaPredicted RBP13.1□□□□□ -0.31
PDLIM2-212ENST00000443561 SUN2Q9UH99 717 aa13.1□□□□□ -0.31
PDLIM2-212ENST00000443561 PPM1HQ9ULR3 514 aa13.1□□□□□ -0.31
PDLIM2-212ENST00000443561 CAPN6Q9Y6Q1 641 aa13.1□□□□□ -0.31
PDLIM2-212ENST00000443561 CXorf51AA0A1B0GTR3 108 aa13.09□□□□□ -0.31
PDLIM2-212ENST00000443561 LMNAP02545 664 aaKnown RBP13.09□□□□□ -0.31
PDLIM2-212ENST00000443561 ACSL1P33121 698 aa13.09□□□□□ -0.31
PDLIM2-212ENST00000443561 PSMD8P48556 350 aa13.09□□□□□ -0.31
PDLIM2-212ENST00000443561 MRE11P49959 708 aa13.09□□□□□ -0.31
PDLIM2-212ENST00000443561 CLCN6P51797 869 aa13.09□□□□□ -0.31
PDLIM2-212ENST00000443561 ZNF135P52742 658 aaPredicted RBP13.09□□□□□ -0.31
PDLIM2-212ENST00000443561 GBE1Q04446 702 aa13.09□□□□□ -0.31
PDLIM2-212ENST00000443561 ELAVL3Q14576 367 aaKnown RBP13.09□□□□□ -0.31
PDLIM2-212ENST00000443561 PAFAH1B3Q15102 231 aaKnown RBP13.09□□□□□ -0.31
PDLIM2-212ENST00000443561 HADHQ16836 314 aaKnown RBP13.09□□□□□ -0.31
PDLIM2-212ENST00000443561 ANKRD20A8PQ5CZ79 823 aa13.09□□□□□ -0.31
PDLIM2-212ENST00000443561 ATXN7L2Q5T6C5 722 aaPredicted RBP13.09□□□□□ -0.31
PDLIM2-212ENST00000443561 LRRC38Q5VT99 294 aa13.09□□□□□ -0.31
PDLIM2-212ENST00000443561 MFSD7Q6UXD7 560 aa13.09□□□□□ -0.31
PDLIM2-212ENST00000443561 PRR23BQ6ZRT6 265 aa13.09□□□□□ -0.31
PDLIM2-212ENST00000443561 PGBD3Q8N328 593 aa13.09□□□□□ -0.31
PDLIM2-212ENST00000443561 DEFB119Q8N690 84 aa13.09□□□□□ -0.31
PDLIM2-212ENST00000443561 ATP11CQ8NB49 1132 aa13.09□□□□□ -0.31
PDLIM2-212ENST00000443561 ALG3Q92685 438 aa13.09□□□□□ -0.31
PDLIM2-212ENST00000443561 PRCCQ92733 491 aaPredicted RBP13.09□□□□□ -0.31
PDLIM2-212ENST00000443561 NKD2Q969F2 451 aaPredicted RBP13.09□□□□□ -0.31
PDLIM2-212ENST00000443561 TM6SF2Q9BZW4 377 aa13.09□□□□□ -0.31
PDLIM2-212ENST00000443561 PIEZO1Q92508 2521 aa13.09□□□□□ -0.31
PDLIM2-212ENST00000443561 TMEM131Q92545 1883 aa13.08□□□□□ -0.32
PDLIM2-212ENST00000443561 LAMA1P25391 3075 aa13.08□□□□□ -0.32
PDLIM2-212ENST00000443561 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.08□□□□□ -0.32
PDLIM2-212ENST00000443561 A0A1W2PP55 124 aa13.08□□□□□ -0.32
PDLIM2-212ENST00000443561 MCF2LO15068 1137 aa13.08□□□□□ -0.32
PDLIM2-212ENST00000443561 INSIG1O15503 277 aa13.08□□□□□ -0.32
PDLIM2-212ENST00000443561 SPINT1O43278 529 aa13.08□□□□□ -0.32
PDLIM2-212ENST00000443561 MAFKO60675 156 aa13.08□□□□□ -0.32
PDLIM2-212ENST00000443561 EPN2O95208 641 aa13.08□□□□□ -0.32
PDLIM2-212ENST00000443561 KRT1P04264 644 aa13.08□□□□□ -0.32
PDLIM2-212ENST00000443561 KRT7P08729 469 aa13.08□□□□□ -0.32
PDLIM2-212ENST00000443561 ETFBP38117 255 aa13.08□□□□□ -0.32
PDLIM2-212ENST00000443561 ARL4AP40617 200 aa13.08□□□□□ -0.32
PDLIM2-212ENST00000443561 SLC1A1P43005 524 aa13.08□□□□□ -0.32
PDLIM2-212ENST00000443561 NOP2P46087 812 aaKnown RBP13.08□□□□□ -0.32
PDLIM2-212ENST00000443561 CCNHP51946 323 aaPredicted RBP13.08□□□□□ -0.32
PDLIM2-212ENST00000443561 TAS2R38P59533 333 aa13.08□□□□□ -0.32
PDLIM2-212ENST00000443561 KRT81Q14533 505 aa13.08□□□□□ -0.32
PDLIM2-212ENST00000443561 IHHQ14623 411 aa13.08□□□□□ -0.32
PDLIM2-212ENST00000443561 PDK2Q15119 407 aa13.08□□□□□ -0.32
PDLIM2-212ENST00000443561 POM121L1PQ3SYA9 428 aa13.08□□□□□ -0.32
PDLIM2-212ENST00000443561 USP39Q53GS9 565 aaKnown RBP13.08□□□□□ -0.32
PDLIM2-212ENST00000443561 SLC9A4Q6AI14 798 aa13.08□□□□□ -0.32
PDLIM2-212ENST00000443561 NPNTQ6UXI9 565 aa13.08□□□□□ -0.32
PDLIM2-212ENST00000443561 TMEFF1Q8IYR6 380 aa13.08□□□□□ -0.32
PDLIM2-212ENST00000443561 PGBD5Q8N414 524 aa13.08□□□□□ -0.32
PDLIM2-212ENST00000443561 OR6K2Q8NGY2 324 aa13.08□□□□□ -0.32
PDLIM2-212ENST00000443561 ISG20Q96AZ6 181 aaKnown RBP13.08□□□□□ -0.32
PDLIM2-212ENST00000443561 RNF25Q96BH1 459 aaPredicted RBP13.08□□□□□ -0.32
PDLIM2-212ENST00000443561 TOE1Q96GM8 510 aaKnown RBP13.08□□□□□ -0.32
PDLIM2-212ENST00000443561 RNF157Q96PX1 679 aa13.08□□□□□ -0.32
PDLIM2-212ENST00000443561 ORAI3Q9BRQ5 295 aa13.08□□□□□ -0.32
PDLIM2-212ENST00000443561 CEP44Q9C0F1 390 aa13.08□□□□□ -0.32
PDLIM2-212ENST00000443561 SMOC1Q9H4F8 434 aa13.08□□□□□ -0.32
PDLIM2-212ENST00000443561 FBRSQ9HAH7 460 aa13.08□□□□□ -0.32
PDLIM2-212ENST00000443561 LCMT1Q9UIC8 334 aa13.08□□□□□ -0.32
PDLIM2-212ENST00000443561 DMXL1Q9Y485 3027 aa13.07□□□□□ -0.32
PDLIM2-212ENST00000443561 LRRD1A4D1F6 860 aa13.07□□□□□ -0.32
PDLIM2-212ENST00000443561 ZNF487B1APH4 448 aa13.07□□□□□ -0.32
PDLIM2-212ENST00000443561 DFFAO00273 331 aa13.07□□□□□ -0.32
PDLIM2-212ENST00000443561 ALOX15BO15296 676 aa13.07□□□□□ -0.32
PDLIM2-212ENST00000443561 ARHGAP6O43182 974 aa13.07□□□□□ -0.32
PDLIM2-212ENST00000443561 PSTPIP1O43586 416 aa13.07□□□□□ -0.32
PDLIM2-212ENST00000443561 BNIP3LO60238 219 aa13.07□□□□□ -0.32
PDLIM2-212ENST00000443561 GFRA3O60609 400 aa13.07□□□□□ -0.32
PDLIM2-212ENST00000443561 TNNT1P13805 278 aa13.07□□□□□ -0.32
PDLIM2-212ENST00000443561 CD6P30203 668 aa13.07□□□□□ -0.32
PDLIM2-212ENST00000443561 CHRNA3P32297 505 aa13.07□□□□□ -0.32
PDLIM2-212ENST00000443561 SLC8A1P32418 973 aa13.07□□□□□ -0.32
PDLIM2-212ENST00000443561 CDKN2BP42772 138 aa13.07□□□□□ -0.32
PDLIM2-212ENST00000443561 PEX5P50542 639 aa13.07□□□□□ -0.32
PDLIM2-212ENST00000443561 SLC20A2Q08357 652 aa13.07□□□□□ -0.32
PDLIM2-212ENST00000443561 GALNT2Q10471 571 aa13.07□□□□□ -0.32
PDLIM2-212ENST00000443561 E2F5Q15329 346 aa13.07□□□□□ -0.32
PDLIM2-212ENST00000443561 LLGL1Q15334 1064 aa13.07□□□□□ -0.32
PDLIM2-212ENST00000443561 CCDC6Q16204 474 aa13.07□□□□□ -0.32
PDLIM2-212ENST00000443561 ACCSLQ4AC99 568 aa13.07□□□□□ -0.32
PDLIM2-212ENST00000443561 PIP5KL1Q5T9C9 394 aa13.07□□□□□ -0.32
PDLIM2-212ENST00000443561 AGBL4Q5VU57 503 aa13.07□□□□□ -0.32
PDLIM2-212ENST00000443561 DCAF12L1Q5VU92 463 aa13.07□□□□□ -0.32
PDLIM2-212ENST00000443561 LAIR1Q6GTX8 287 aa13.07□□□□□ -0.32
PDLIM2-212ENST00000443561 RETSATQ6NUM9 610 aa13.07□□□□□ -0.32
PDLIM2-212ENST00000443561 AADACL2Q6P093 401 aa13.07□□□□□ -0.32
PDLIM2-212ENST00000443561 TMCO3Q6UWJ1 677 aa13.07□□□□□ -0.32
PDLIM2-212ENST00000443561 CEP68Q76N32 757 aa13.07□□□□□ -0.32
PDLIM2-212ENST00000443561 ARMCX6Q7L4S7 300 aa13.07□□□□□ -0.32
PDLIM2-212ENST00000443561 NT5DC3Q86UY8 548 aa13.07□□□□□ -0.32
PDLIM2-212ENST00000443561 FAM124AQ86V42 546 aa13.07□□□□□ -0.32
PDLIM2-212ENST00000443561 ALYREFQ86V81 257 aaKnown RBP13.07□□□□□ -0.32
PDLIM2-212ENST00000443561 RHOT1Q8IXI2 618 aa13.07□□□□□ -0.32
PDLIM2-212ENST00000443561 PCDH20Q8N6Y1 951 aaKnown RBP13.07□□□□□ -0.32
PDLIM2-212ENST00000443561 PIP4K2CQ8TBX8 421 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms