RNA–Protein interactions for RNA: ENST00000442510.6

PTPRC-209, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRC, Length 5,164 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-209ENST00000442510 PCYOX1LQ8NBM8 494 aa5.67□□□□□ -1.5
PTPRC-209ENST00000442510 LINC00301Q8NCQ3 95 aa5.67□□□□□ -1.5
PTPRC-209ENST00000442510 C3orf49Q96BT1 292 aa5.67□□□□□ -1.5
PTPRC-209ENST00000442510 NIFKQ9BYG3 293 aaKnown RBP5.67□□□□□ -1.5
PTPRC-209ENST00000442510 GDF3Q9NR23 364 aa5.67□□□□□ -1.5
PTPRC-209ENST00000442510 FKBP7Q9Y680 259 aa5.67□□□□□ -1.5
PTPRC-209ENST00000442510 MROH7-TTC4A0A0A0MT08 1334 aa5.67□□□□□ -1.5
PTPRC-209ENST00000442510 TTC26A0AVF1 554 aa5.67□□□□□ -1.5
PTPRC-209ENST00000442510 NEDD8-MDP1E9PL57 170 aa5.67□□□□□ -1.5
PTPRC-209ENST00000442510 DFFAO00273 331 aa5.67□□□□□ -1.5
PTPRC-209ENST00000442510 WWP2O00308 870 aa5.67□□□□□ -1.5
PTPRC-209ENST00000442510 TOR1AO14656 332 aa5.67□□□□□ -1.5
PTPRC-209ENST00000442510 DCLK1O15075 740 aa5.67□□□□□ -1.5
PTPRC-209ENST00000442510 CIDEAO60543 219 aa5.67□□□□□ -1.5
PTPRC-209ENST00000442510 PPP6R2O75170 966 aa5.67□□□□□ -1.5
PTPRC-209ENST00000442510 PMPCBO75439 489 aa5.67□□□□□ -1.5
PTPRC-209ENST00000442510 RETP07949 1114 aa5.67□□□□□ -1.5
PTPRC-209ENST00000442510 LBPP18428 481 aa5.67□□□□□ -1.5
PTPRC-209ENST00000442510 ARHGAP17Q68EM7 881 aa5.67□□□□□ -1.5
PTPRC-209ENST00000442510 INTS5Q6P9B9 1019 aaKnown RBP5.67□□□□□ -1.5
PTPRC-209ENST00000442510 DTHD1Q6ZMT9 781 aa5.67□□□□□ -1.5
PTPRC-209ENST00000442510 PLEKHG7Q6ZR37 379 aa5.67□□□□□ -1.5
PTPRC-209ENST00000442510 USP49Q70CQ1 688 aa5.67□□□□□ -1.5
PTPRC-209ENST00000442510 CHMP1BQ7LBR1 199 aa5.67□□□□□ -1.5
PTPRC-209ENST00000442510 ZNF410Q86VK4 478 aa5.67□□□□□ -1.5
PTPRC-209ENST00000442510 TMC8Q8IU68 726 aa5.67□□□□□ -1.5
PTPRC-209ENST00000442510 LACC1Q8IV20 430 aa5.67□□□□□ -1.5
PTPRC-209ENST00000442510 GRIN3AQ8TCU5 1115 aa5.67□□□□□ -1.5
PTPRC-209ENST00000442510 REEP4Q9H6H4 257 aa5.67□□□□□ -1.5
PTPRC-209ENST00000442510 TMEM138Q9NPI0 162 aa5.67□□□□□ -1.5
PTPRC-209ENST00000442510 MARCOQ9UEW3 520 aaPredicted RBP5.67□□□□□ -1.5
PTPRC-209ENST00000442510 TESMINQ9Y4I5 508 aa5.67□□□□□ -1.5
PTPRC-209ENST00000442510 E7ENX8 843 aa5.67□□□□□ -1.5
PTPRC-209ENST00000442510 TCAPO15273 167 aa5.67□□□□□ -1.5
PTPRC-209ENST00000442510 ALOX15BO15296 676 aa5.67□□□□□ -1.5
PTPRC-209ENST00000442510 FOXP2O15409 715 aa5.67□□□□□ -1.5
PTPRC-209ENST00000442510 ZBTB24O43167 697 aaPredicted RBP5.67□□□□□ -1.5
PTPRC-209ENST00000442510 MAGEC1O60732 1142 aa5.67□□□□□ -1.5
PTPRC-209ENST00000442510 ADAM23O75077 832 aa5.67□□□□□ -1.5
PTPRC-209ENST00000442510 DNAJB6O75190 326 aa5.67□□□□□ -1.5
PTPRC-209ENST00000442510 FAM13AO94988 1023 aa5.67□□□□□ -1.5
PTPRC-209ENST00000442510 EYA4O95677 639 aa5.67□□□□□ -1.5
PTPRC-209ENST00000442510 PROCP04070 461 aa5.67□□□□□ -1.5
PTPRC-209ENST00000442510 PEX2P28328 305 aa5.67□□□□□ -1.5
PTPRC-209ENST00000442510 GUCY1A2P33402 732 aa5.67□□□□□ -1.5
PTPRC-209ENST00000442510 C21orf58P58505 322 aa5.67□□□□□ -1.5
PTPRC-209ENST00000442510 DYNLL1P63167 89 aaKnown RBP5.67□□□□□ -1.5
PTPRC-209ENST00000442510 CLEC16AQ2KHT3 1053 aa5.67□□□□□ -1.5
PTPRC-209ENST00000442510 RAET1GQ6H3X3 334 aa5.67□□□□□ -1.5
PTPRC-209ENST00000442510 CFAP161Q6P656 301 aa5.67□□□□□ -1.5
PTPRC-209ENST00000442510 NIM1KQ8IY84 436 aa5.67□□□□□ -1.5
PTPRC-209ENST00000442510 OXR1Q8N573 874 aa5.67□□□□□ -1.5
PTPRC-209ENST00000442510 Q8N9G6 341 aaPredicted RBP5.67□□□□□ -1.5
PTPRC-209ENST00000442510 DEDD2Q8WXF8 326 aa5.67□□□□□ -1.5
PTPRC-209ENST00000442510 ING5Q8WYH8 240 aa5.67□□□□□ -1.5
PTPRC-209ENST00000442510 MAGEB10Q96LZ2 347 aaPredicted RBP5.67□□□□□ -1.5
PTPRC-209ENST00000442510 CAMK1GQ96NX5 476 aa5.67□□□□□ -1.5
PTPRC-209ENST00000442510 NFKBIL1Q9UBC1 381 aaPredicted RBP5.67□□□□□ -1.5
PTPRC-209ENST00000442510 GRID1Q9ULK0 1009 aa5.67□□□□□ -1.5
PTPRC-209ENST00000442510 PSMD13Q9UNM6 376 aa5.67□□□□□ -1.5
PTPRC-209ENST00000442510 NEU2Q9Y3R4 380 aa5.67□□□□□ -1.5
PTPRC-209ENST00000442510 MAFBQ9Y5Q3 323 aaPredicted RBP5.67□□□□□ -1.5
PTPRC-209ENST00000442510 CLIC4Q9Y696 253 aa5.67□□□□□ -1.5
PTPRC-209ENST00000442510 PCDH11XQ9BZA7 1347 aa5.67□□□□□ -1.5
PTPRC-209ENST00000442510 PCDH11YQ9BZA8 1340 aa5.67□□□□□ -1.5
PTPRC-209ENST00000442510 ADCY9O60503 1353 aa5.67□□□□□ -1.5
PTPRC-209ENST00000442510 CCDC195A0A1B0GUA6 201 aa5.66□□□□□ -1.5
PTPRC-209ENST00000442510 HSBP1L1C9JCN9 74 aa5.66□□□□□ -1.5
PTPRC-209ENST00000442510 TO15178 435 aa5.66□□□□□ -1.5
PTPRC-209ENST00000442510 JRKO75564 520 aa5.66□□□□□ -1.5
PTPRC-209ENST00000442510 UMPSP11172 480 aa5.66□□□□□ -1.5
PTPRC-209ENST00000442510 ANXA8P13928 327 aa5.66□□□□□ -1.5
PTPRC-209ENST00000442510 FXR1P51114 621 aaKnown RBP eCLIP5.66□□□□□ -1.5
PTPRC-209ENST00000442510 CDH11P55287 796 aa5.66□□□□□ -1.5
PTPRC-209ENST00000442510 IFI35P80217 286 aaPredicted RBP5.66□□□□□ -1.5
PTPRC-209ENST00000442510 MAT1AQ00266 395 aaKnown RBP5.66□□□□□ -1.5
PTPRC-209ENST00000442510 ACVR2BQ13705 512 aa5.66□□□□□ -1.5
PTPRC-209ENST00000442510 TCEAL1Q15170 157 aa5.66□□□□□ -1.5
PTPRC-209ENST00000442510 WDR72Q3MJ13 1102 aa5.66□□□□□ -1.5
PTPRC-209ENST00000442510 ANXA8L1Q5VT79 327 aa5.66□□□□□ -1.5
PTPRC-209ENST00000442510 AFMIDQ63HM1 303 aa5.66□□□□□ -1.5
PTPRC-209ENST00000442510 TPGS1Q6ZTW0 290 aa5.66□□□□□ -1.5
PTPRC-209ENST00000442510 ZNF654Q8IZM8 581 aa5.66□□□□□ -1.5
PTPRC-209ENST00000442510 OR52K1Q8NGK4 314 aa5.66□□□□□ -1.5
PTPRC-209ENST00000442510 RHPN1Q8TCX5 695 aa5.66□□□□□ -1.5
PTPRC-209ENST00000442510 DNAJA4Q8WW22 397 aaPredicted RBP5.66□□□□□ -1.5
PTPRC-209ENST00000442510 RFT1Q96AA3 541 aa5.66□□□□□ -1.5
PTPRC-209ENST00000442510 OXNAD1Q96HP4 312 aaPredicted RBP5.66□□□□□ -1.5
PTPRC-209ENST00000442510 C1orf74Q96LT6 269 aa5.66□□□□□ -1.5
PTPRC-209ENST00000442510 PPP3R2Q96LZ3 170 aa5.66□□□□□ -1.5
PTPRC-209ENST00000442510 CSRNP1Q96S65 589 aa5.66□□□□□ -1.5
PTPRC-209ENST00000442510 SLX1AQ9BQ83 275 aa5.66□□□□□ -1.5
PTPRC-209ENST00000442510 TRIT1Q9H3H1 467 aaKnown RBP5.66□□□□□ -1.5
PTPRC-209ENST00000442510 TUT1Q9H6E5 874 aaKnown RBP5.66□□□□□ -1.5
PTPRC-209ENST00000442510 CCDC86Q9H6F5 360 aaKnown RBP5.66□□□□□ -1.5
PTPRC-209ENST00000442510 AGO2Q9UKV8 859 aaKnown RBP5.66□□□□□ -1.5
PTPRC-209ENST00000442510 SSR3Q9UNL2 185 aa5.66□□□□□ -1.5
PTPRC-209ENST00000442510 B3GNT3Q9Y2A9 372 aa5.66□□□□□ -1.5
PTPRC-209ENST00000442510 CARMIL3Q8ND23 1372 aa5.66□□□□□ -1.5
PTPRC-209ENST00000442510 SETD1BQ9UPS6 1966 aaKnown RBP5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms