RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 POLD3Q15054 466 aaPredicted RBP7.54□□□□□ -1.2
CDC42BPA-208ENST00000442054 RFWD3Q6PCD5 774 aa7.54□□□□□ -1.2
CDC42BPA-208ENST00000442054 HFE2Q6ZVN8 426 aa7.54□□□□□ -1.2
CDC42BPA-208ENST00000442054 CHST9Q7L1S5 443 aa7.54□□□□□ -1.2
CDC42BPA-208ENST00000442054 NDUFAF2Q8N183 169 aa7.54□□□□□ -1.2
CDC42BPA-208ENST00000442054 CFAP52Q8N1V2 620 aa7.54□□□□□ -1.2
CDC42BPA-208ENST00000442054 TXNDC5Q8NBS9 432 aaKnown RBP7.54□□□□□ -1.2
CDC42BPA-208ENST00000442054 DNASE1L2Q92874 299 aa7.54□□□□□ -1.2
CDC42BPA-208ENST00000442054 USP13Q92995 863 aaPredicted RBP7.54□□□□□ -1.2
CDC42BPA-208ENST00000442054 PTCD3Q96EY7 689 aaKnown RBP7.54□□□□□ -1.2
CDC42BPA-208ENST00000442054 SIPA1Q96FS4 1042 aa7.54□□□□□ -1.2
CDC42BPA-208ENST00000442054 HHIPQ96QV1 700 aa7.54□□□□□ -1.2
CDC42BPA-208ENST00000442054 SELENOSQ9BQE4 189 aa7.54□□□□□ -1.2
CDC42BPA-208ENST00000442054 MYLK2Q9H1R3 596 aa7.54□□□□□ -1.2
CDC42BPA-208ENST00000442054 SEPT10Q9P0V9 454 aa7.54□□□□□ -1.2
CDC42BPA-208ENST00000442054 PCDHGC3Q9UN70 934 aa7.54□□□□□ -1.2
CDC42BPA-208ENST00000442054 LRRC42Q9Y546 428 aa7.54□□□□□ -1.2
CDC42BPA-208ENST00000442054 TANC1Q9C0D5 1861 aa7.53□□□□□ -1.2
CDC42BPA-208ENST00000442054 A6NHS1 94 aa7.53□□□□□ -1.2
CDC42BPA-208ENST00000442054 GOLGA8CPA6NN73 597 aa7.53□□□□□ -1.2
CDC42BPA-208ENST00000442054 PDGFBP01127 241 aaPredicted RBP7.53□□□□□ -1.2
CDC42BPA-208ENST00000442054 SLC4A1P02730 911 aa7.53□□□□□ -1.2
CDC42BPA-208ENST00000442054 ZSCAN5DPP0CG00 497 aa7.53□□□□□ -1.2
CDC42BPA-208ENST00000442054 USP46P62068 366 aa7.53□□□□□ -1.2
CDC42BPA-208ENST00000442054 HTR4Q13639 388 aa7.53□□□□□ -1.2
CDC42BPA-208ENST00000442054 FAM91A1Q658Y4 838 aa7.53□□□□□ -1.2
CDC42BPA-208ENST00000442054 TSSK4Q6SA08 328 aa7.53□□□□□ -1.2
CDC42BPA-208ENST00000442054 LCLAT1Q6UWP7 414 aa7.53□□□□□ -1.2
CDC42BPA-208ENST00000442054 BBS7Q8IWZ6 715 aa7.53□□□□□ -1.2
CDC42BPA-208ENST00000442054 EMC1Q8N766 993 aa7.53□□□□□ -1.2
CDC42BPA-208ENST00000442054 RPLP0P6Q8NHW5 317 aa7.53□□□□□ -1.2
CDC42BPA-208ENST00000442054 DCAKDQ8WVC6 231 aa7.53□□□□□ -1.2
CDC42BPA-208ENST00000442054 KBTBD7Q8WVZ9 684 aa7.53□□□□□ -1.2
CDC42BPA-208ENST00000442054 SPATA17Q96L03 361 aa7.53□□□□□ -1.2
CDC42BPA-208ENST00000442054 MIPEPQ99797 713 aa7.53□□□□□ -1.2
CDC42BPA-208ENST00000442054 STMN4Q9H169 189 aaPredicted RBP7.53□□□□□ -1.2
CDC42BPA-208ENST00000442054 SDCBP2Q9H190 292 aa7.53□□□□□ -1.2
CDC42BPA-208ENST00000442054 CRISPLD1Q9H336 500 aa7.53□□□□□ -1.2
CDC42BPA-208ENST00000442054 LTB4R2Q9NPC1 389 aa7.53□□□□□ -1.2
CDC42BPA-208ENST00000442054 HSFX1Q9UBD0 423 aa7.53□□□□□ -1.2
CDC42BPA-208ENST00000442054 LNPEPQ9UIQ6 1025 aa7.53□□□□□ -1.2
CDC42BPA-208ENST00000442054 ARHGAP26Q9UNA1 814 aa7.53□□□□□ -1.2
CDC42BPA-208ENST00000442054 TLDC2A0PJX2 215 aa7.53□□□□□ -1.2
CDC42BPA-208ENST00000442054 BRAFP15056 766 aa7.53□□□□□ -1.2
CDC42BPA-208ENST00000442054 IL1R2P27930 398 aa7.53□□□□□ -1.2
CDC42BPA-208ENST00000442054 OR1E1P30953 314 aa7.53□□□□□ -1.2
CDC42BPA-208ENST00000442054 MAGEA4P43358 317 aa7.53□□□□□ -1.2
CDC42BPA-208ENST00000442054 GALK1P51570 392 aa7.53□□□□□ -1.2
CDC42BPA-208ENST00000442054 GDF10P55107 478 aa7.53□□□□□ -1.2
CDC42BPA-208ENST00000442054 MRPL58Q14197 206 aaKnown RBP7.53□□□□□ -1.2
CDC42BPA-208ENST00000442054 POM121L1PQ3SYA9 428 aa7.53□□□□□ -1.2
CDC42BPA-208ENST00000442054 FAM133BQ5BKY9 247 aaKnown RBP7.53□□□□□ -1.2
CDC42BPA-208ENST00000442054 ADGRD1Q6QNK2 874 aa7.53□□□□□ -1.2
CDC42BPA-208ENST00000442054 MFSD7Q6UXD7 560 aa7.53□□□□□ -1.2
CDC42BPA-208ENST00000442054 EGFL6Q8IUX8 553 aa7.53□□□□□ -1.2
CDC42BPA-208ENST00000442054 RHOT1Q8IXI2 618 aa7.53□□□□□ -1.2
CDC42BPA-208ENST00000442054 OSCP1Q8WVF1 389 aa7.53□□□□□ -1.2
CDC42BPA-208ENST00000442054 FAM118BQ9BPY3 351 aa7.53□□□□□ -1.2
CDC42BPA-208ENST00000442054 SPHK2Q9NRA0 654 aa7.53□□□□□ -1.2
CDC42BPA-208ENST00000442054 HOMER3Q9NSC5 361 aa7.53□□□□□ -1.2
CDC42BPA-208ENST00000442054 COMMD8Q9NX08 183 aa7.53□□□□□ -1.2
CDC42BPA-208ENST00000442054 RRN3Q9NYV6 651 aa7.53□□□□□ -1.2
CDC42BPA-208ENST00000442054 GGT7Q9UJ14 662 aa7.53□□□□□ -1.2
CDC42BPA-208ENST00000442054 GPR179Q6PRD1 2367 aa7.53□□□□□ -1.2
CDC42BPA-208ENST00000442054 MYO10Q9HD67 2058 aa7.53□□□□□ -1.2
CDC42BPA-208ENST00000442054 YJEFN3A6XGL0 299 aa7.53□□□□□ -1.2
CDC42BPA-208ENST00000442054 E7ENQ6 273 aa7.53□□□□□ -1.2
CDC42BPA-208ENST00000442054 GABRDO14764 452 aa7.53□□□□□ -1.2
CDC42BPA-208ENST00000442054 PECAM1P16284 738 aaPredicted RBP7.53□□□□□ -1.2
CDC42BPA-208ENST00000442054 SLC8A1P32418 973 aa7.53□□□□□ -1.2
CDC42BPA-208ENST00000442054 IZUMO3Q5VZ72 239 aa7.53□□□□□ -1.2
CDC42BPA-208ENST00000442054 GBP7Q8N8V2 638 aaPredicted RBP7.53□□□□□ -1.2
CDC42BPA-208ENST00000442054 CCDC63Q8NA47 563 aa7.53□□□□□ -1.2
CDC42BPA-208ENST00000442054 DTWD2Q8NBA8 298 aa7.53□□□□□ -1.2
CDC42BPA-208ENST00000442054 CFAP61Q8NHU2 1237 aa7.53□□□□□ -1.2
CDC42BPA-208ENST00000442054 GRK7Q8WTQ7 553 aa7.53□□□□□ -1.2
CDC42BPA-208ENST00000442054 MAIP1Q8WWC4 291 aa7.53□□□□□ -1.2
CDC42BPA-208ENST00000442054 S1PR5Q9H228 398 aa7.53□□□□□ -1.2
CDC42BPA-208ENST00000442054 ATP13A1Q9HD20 1204 aa7.53□□□□□ -1.2
CDC42BPA-208ENST00000442054 ANAPC5Q9UJX4 755 aa7.53□□□□□ -1.2
CDC42BPA-208ENST00000442054 EFR3BQ9Y2G0 817 aa7.53□□□□□ -1.2
CDC42BPA-208ENST00000442054 TBC1D3DA0A087WVF3 549 aa7.52□□□□□ -1.21
CDC42BPA-208ENST00000442054 TBC1D3IA0A087WXS9 549 aa7.52□□□□□ -1.21
CDC42BPA-208ENST00000442054 TBC1D3EA0A087X179 549 aa7.52□□□□□ -1.21
CDC42BPA-208ENST00000442054 TBC1D3KA0A087X1G2 549 aa7.52□□□□□ -1.21
CDC42BPA-208ENST00000442054 A0A1W2PPM1 405 aa7.52□□□□□ -1.21
CDC42BPA-208ENST00000442054 TBC1D3FA6NER0 549 aaPredicted RBP7.52□□□□□ -1.21
CDC42BPA-208ENST00000442054 SMIM23A6NLE4 172 aa7.52□□□□□ -1.21
CDC42BPA-208ENST00000442054 TBC1D3LB9A6J9 549 aa7.52□□□□□ -1.21
CDC42BPA-208ENST00000442054 DFFAO00273 331 aa7.52□□□□□ -1.21
CDC42BPA-208ENST00000442054 ANP32DO95626 131 aa7.52□□□□□ -1.21
CDC42BPA-208ENST00000442054 STAU1O95793 577 aaKnown RBP7.52□□□□□ -1.21
CDC42BPA-208ENST00000442054 TBC1D3HP0C7X1 549 aa7.52□□□□□ -1.21
CDC42BPA-208ENST00000442054 GJA4P35212 333 aa7.52□□□□□ -1.21
CDC42BPA-208ENST00000442054 NOS2P35228 1153 aa7.52□□□□□ -1.21
CDC42BPA-208ENST00000442054 RPA3P35244 121 aaPredicted RBP7.52□□□□□ -1.21
CDC42BPA-208ENST00000442054 ETFBP38117 255 aa7.52□□□□□ -1.21
CDC42BPA-208ENST00000442054 GRIA2P42262 883 aa7.52□□□□□ -1.21
CDC42BPA-208ENST00000442054 MSH2P43246 934 aa7.52□□□□□ -1.21
CDC42BPA-208ENST00000442054 CLCN5P51795 746 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms