RNA–Protein interactions for RNA: ENST00000441756.1

MCF2L-217, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 370 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-217ENST00000441756 RUNX3Q13761 415 aa16.19■□□□□ 0.18
MCF2L-217ENST00000441756 GRM2Q14416 872 aa16.19■□□□□ 0.18
MCF2L-217ENST00000441756 INO80DQ53TQ3 878 aaPredicted RBP16.19■□□□□ 0.18
MCF2L-217ENST00000441756 PITRM1Q5JRX3 1037 aa16.19■□□□□ 0.18
MCF2L-217ENST00000441756 TRIM68Q6AZZ1 485 aa16.19■□□□□ 0.18
MCF2L-217ENST00000441756 ZDHHC24Q6UX98 284 aa16.19■□□□□ 0.18
MCF2L-217ENST00000441756 FBXO25Q8TCJ0 367 aa16.19■□□□□ 0.18
MCF2L-217ENST00000441756 PPM1EQ8WY54 764 aa16.19■□□□□ 0.18
MCF2L-217ENST00000441756 CPT1BQ92523 772 aa16.19■□□□□ 0.18
MCF2L-217ENST00000441756 FGF14Q92915 247 aa16.19■□□□□ 0.18
MCF2L-217ENST00000441756 ALG14Q96F25 216 aa16.19■□□□□ 0.18
MCF2L-217ENST00000441756 PHF7Q9BWX1 381 aaPredicted RBP16.19■□□□□ 0.18
MCF2L-217ENST00000441756 PHACTR1Q9C0D0 580 aa16.19■□□□□ 0.18
MCF2L-217ENST00000441756 POLR1EQ9GZS1 481 aaKnown RBP16.19■□□□□ 0.18
MCF2L-217ENST00000441756 EBF3Q9H4W6 596 aa16.19■□□□□ 0.18
MCF2L-217ENST00000441756 ETNK1Q9HBU6 452 aa16.19■□□□□ 0.18
MCF2L-217ENST00000441756 GLOD4Q9HC38 313 aa16.19■□□□□ 0.18
MCF2L-217ENST00000441756 ARFGAP3Q9NP61 516 aa16.19■□□□□ 0.18
MCF2L-217ENST00000441756 NT5MQ9NPB1 228 aa16.19■□□□□ 0.18
MCF2L-217ENST00000441756 ZDHHC18Q9NUE0 388 aa16.19■□□□□ 0.18
MCF2L-217ENST00000441756 DNAJC17Q9NVM6 304 aaKnown RBP16.19■□□□□ 0.18
MCF2L-217ENST00000441756 VPS51Q9UID3 782 aa16.19■□□□□ 0.18
MCF2L-217ENST00000441756 SLC25A13Q9UJS0 675 aa16.19■□□□□ 0.18
MCF2L-217ENST00000441756 ATP8A1Q9Y2Q0 1164 aa16.19■□□□□ 0.18
MCF2L-217ENST00000441756 FARP1Q9Y4F1 1045 aaPredicted RBP16.19■□□□□ 0.18
MCF2L-217ENST00000441756 TTLL3Q9Y4R7 772 aa16.19■□□□□ 0.18
MCF2L-217ENST00000441756 NUMBLQ9Y6R0 609 aa16.19■□□□□ 0.18
MCF2L-217ENST00000441756 DOCK8Q8NF50 2099 aa16.18■□□□□ 0.18
MCF2L-217ENST00000441756 AP3B1O00203 1094 aa16.18■□□□□ 0.18
MCF2L-217ENST00000441756 ZMPSTE24O75844 475 aa16.18■□□□□ 0.18
MCF2L-217ENST00000441756 METTL18O95568 372 aa16.18■□□□□ 0.18
MCF2L-217ENST00000441756 ASLP04424 464 aa16.18■□□□□ 0.18
MCF2L-217ENST00000441756 HLA-DQB2P05538 268 aa16.18■□□□□ 0.18
MCF2L-217ENST00000441756 APRTP07741 180 aa16.18■□□□□ 0.18
MCF2L-217ENST00000441756 H2AFXP16104 143 aaPredicted RBP16.18■□□□□ 0.18
MCF2L-217ENST00000441756 CES1P23141 567 aa16.18■□□□□ 0.18
MCF2L-217ENST00000441756 HLA-FP30511 346 aa16.18■□□□□ 0.18
MCF2L-217ENST00000441756 GDI1P31150 447 aa16.18■□□□□ 0.18
MCF2L-217ENST00000441756 CD70P32970 193 aa16.18■□□□□ 0.18
MCF2L-217ENST00000441756 EIF2DP41214 584 aaKnown RBP16.18■□□□□ 0.18
MCF2L-217ENST00000441756 GEMP55040 296 aa16.18■□□□□ 0.18
MCF2L-217ENST00000441756 SLC10A7Q0GE19 358 aa16.18■□□□□ 0.18
MCF2L-217ENST00000441756 KCNJ11Q14654 390 aa16.18■□□□□ 0.18
MCF2L-217ENST00000441756 ITPRIPL2Q3MIP1 535 aa16.18■□□□□ 0.18
MCF2L-217ENST00000441756 LEXMQ3ZCV2 418 aa16.18■□□□□ 0.18
MCF2L-217ENST00000441756 GRAMD4Q6IC98 578 aa16.18■□□□□ 0.18
MCF2L-217ENST00000441756 ZCCHC9Q8N567 271 aaKnown RBP16.18■□□□□ 0.18
MCF2L-217ENST00000441756 TAB3Q8N5C8 712 aaPredicted RBP16.18■□□□□ 0.18
MCF2L-217ENST00000441756 NAT8LQ8N9F0 302 aa16.18■□□□□ 0.18
MCF2L-217ENST00000441756 ZFYVE19Q96K21 471 aa16.18■□□□□ 0.18
MCF2L-217ENST00000441756 PSKH2Q96QS6 385 aa16.18■□□□□ 0.18
MCF2L-217ENST00000441756 FCRL5Q96RD9 977 aa16.18■□□□□ 0.18
MCF2L-217ENST00000441756 SLC25A51Q9H1U9 297 aa16.18■□□□□ 0.18
MCF2L-217ENST00000441756 BRD9Q9H8M2 597 aa16.18■□□□□ 0.18
MCF2L-217ENST00000441756 HPS4Q9NQG7 708 aa16.18■□□□□ 0.18
MCF2L-217ENST00000441756 FBXO10Q9UK96 956 aa16.18■□□□□ 0.18
MCF2L-217ENST00000441756 SLC27A6Q9Y2P4 619 aa16.18■□□□□ 0.18
MCF2L-217ENST00000441756 SHROOM3Q8TF72 1996 aa16.18■□□□□ 0.18
MCF2L-217ENST00000441756 NUP205Q92621 2012 aa16.18■□□□□ 0.18
MCF2L-217ENST00000441756 LAMA3Q16787 3333 aa16.17■□□□□ 0.18
MCF2L-217ENST00000441756 PPFIA2O75334 1257 aa16.17■□□□□ 0.18
MCF2L-217ENST00000441756 POLR2EP19388 210 aaKnown RBP16.17■□□□□ 0.18
MCF2L-217ENST00000441756 TNNT3P45378 269 aaPredicted RBP16.17■□□□□ 0.18
MCF2L-217ENST00000441756 ARL4CP56559 192 aa16.17■□□□□ 0.18
MCF2L-217ENST00000441756 ARF5P84085 180 aa16.17■□□□□ 0.18
MCF2L-217ENST00000441756 ITKQ08881 620 aa16.17■□□□□ 0.18
MCF2L-217ENST00000441756 SLMAPQ14BN4 828 aa16.17■□□□□ 0.18
MCF2L-217ENST00000441756 E2F5Q15329 346 aa16.17■□□□□ 0.18
MCF2L-217ENST00000441756 TRADDQ15628 312 aa16.17■□□□□ 0.18
MCF2L-217ENST00000441756 SMAD2Q15796 467 aaKnown RBP16.17■□□□□ 0.18
MCF2L-217ENST00000441756 SLC14A2Q15849 920 aa16.17■□□□□ 0.18
MCF2L-217ENST00000441756 FUT11Q495W5 492 aa16.17■□□□□ 0.18
MCF2L-217ENST00000441756 RALGPS1Q5JS13 557 aa16.17■□□□□ 0.18
MCF2L-217ENST00000441756 FAXCQ5TGI0 409 aa16.17■□□□□ 0.18
MCF2L-217ENST00000441756 NUDT18Q6ZVK8 323 aa16.17■□□□□ 0.18
MCF2L-217ENST00000441756 KIAA0907Q7Z7F0 614 aaPredicted RBP16.17■□□□□ 0.18
MCF2L-217ENST00000441756 APCDD1Q8J025 514 aa16.17■□□□□ 0.18
MCF2L-217ENST00000441756 PDIK1LQ8N165 341 aa16.17■□□□□ 0.18
MCF2L-217ENST00000441756 CNTD1Q8N815 330 aa16.17■□□□□ 0.18
MCF2L-217ENST00000441756 MCUQ8NE86 351 aa16.17■□□□□ 0.18
MCF2L-217ENST00000441756 CSGALNACT1Q8TDX6 532 aa16.17■□□□□ 0.18
MCF2L-217ENST00000441756 AENQ8WTP8 325 aaKnown RBP16.17■□□□□ 0.18
MCF2L-217ENST00000441756 PRCCQ92733 491 aaPredicted RBP16.17■□□□□ 0.18
MCF2L-217ENST00000441756 CAVIN3Q969G5 261 aa16.17■□□□□ 0.18
MCF2L-217ENST00000441756 LMLNQ96KR4 655 aa16.17■□□□□ 0.18
MCF2L-217ENST00000441756 PLA2G2FQ9BZM2 168 aa16.17■□□□□ 0.18
MCF2L-217ENST00000441756 LRRC40Q9H9A6 602 aa16.17■□□□□ 0.18
MCF2L-217ENST00000441756 XAB2Q9HCS7 855 aaKnown RBP16.17■□□□□ 0.18
MCF2L-217ENST00000441756 VPS45Q9NRW7 570 aa16.17■□□□□ 0.18
MCF2L-217ENST00000441756 DEC1Q9P2X7 70 aa16.17■□□□□ 0.18
MCF2L-217ENST00000441756 CLEC4EQ9ULY5 219 aa16.17■□□□□ 0.18
MCF2L-217ENST00000441756 SLC8A2Q9UPR5 921 aa16.17■□□□□ 0.18
MCF2L-217ENST00000441756 C2CD4DB7Z1M9 353 aa16.16■□□□□ 0.18
MCF2L-217ENST00000441756 EIF3HO15372 352 aaKnown RBP eCLIP16.16■□□□□ 0.18
MCF2L-217ENST00000441756 SNAP91O60641 907 aa16.16■□□□□ 0.18
MCF2L-217ENST00000441756 TMCC1O94876 653 aa16.16■□□□□ 0.18
MCF2L-217ENST00000441756 AP2A1O95782 977 aa16.16■□□□□ 0.18
MCF2L-217ENST00000441756 ATP5BP06576 529 aaKnown RBP16.16■□□□□ 0.18
MCF2L-217ENST00000441756 MYBL2P10244 700 aa16.16■□□□□ 0.18
MCF2L-217ENST00000441756 GLDCP23378 1020 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms