RNA–Protein interactions for RNA: ENST00000441024.6

CNOT1-202, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNOT1, Length 4,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-202ENST00000441024 TTPAP49638 278 aa6.48□□□□□ -1.37
CNOT1-202ENST00000441024 CLK1P49759 484 aaKnown RBP6.48□□□□□ -1.37
CNOT1-202ENST00000441024 NEK3P51956 506 aa6.48□□□□□ -1.37
CNOT1-202ENST00000441024 RPL7AP62424 266 aaKnown RBP6.48□□□□□ -1.37
CNOT1-202ENST00000441024 ELF3P78545 371 aaPredicted RBP6.48□□□□□ -1.37
CNOT1-202ENST00000441024 ATP13A4Q4VNC1 1196 aa6.48□□□□□ -1.37
CNOT1-202ENST00000441024 RGMBQ6NW40 437 aa6.48□□□□□ -1.37
CNOT1-202ENST00000441024 IRGCQ6NXR0 463 aa6.48□□□□□ -1.37
CNOT1-202ENST00000441024 PIWIL4Q7Z3Z4 852 aaKnown RBP6.48□□□□□ -1.37
CNOT1-202ENST00000441024 TTC30BQ8N4P2 665 aa6.48□□□□□ -1.37
CNOT1-202ENST00000441024 MAGEC3Q8TD91 643 aa6.48□□□□□ -1.37
CNOT1-202ENST00000441024 KAT2BQ92831 832 aa6.48□□□□□ -1.37
CNOT1-202ENST00000441024 MAGED4Q96JG8 741 aa6.48□□□□□ -1.37
CNOT1-202ENST00000441024 PRDM12Q9H4Q4 367 aa6.48□□□□□ -1.37
CNOT1-202ENST00000441024 TMEM39AQ9NV64 488 aa6.48□□□□□ -1.37
CNOT1-202ENST00000441024 GNPTGQ9UJJ9 305 aa6.48□□□□□ -1.37
CNOT1-202ENST00000441024 RAP2CQ9Y3L5 183 aa6.48□□□□□ -1.37
CNOT1-202ENST00000441024 M0R2N6 131 aa6.48□□□□□ -1.37
CNOT1-202ENST00000441024 MDM4O15151 490 aa6.48□□□□□ -1.37
CNOT1-202ENST00000441024 MLYCDO95822 493 aa6.48□□□□□ -1.37
CNOT1-202ENST00000441024 PIGRP01833 764 aa6.48□□□□□ -1.37
CNOT1-202ENST00000441024 FGF1P05230 155 aa6.48□□□□□ -1.37
CNOT1-202ENST00000441024 ERVK-10P10266 1014 aa6.48□□□□□ -1.37
CNOT1-202ENST00000441024 COL6A2P12110 1019 aa6.48□□□□□ -1.37
CNOT1-202ENST00000441024 KLRC2P26717 231 aa6.48□□□□□ -1.37
CNOT1-202ENST00000441024 PPP1R26Q5T8A7 1209 aaPredicted RBP6.48□□□□□ -1.37
CNOT1-202ENST00000441024 EXOC3L1Q86VI1 746 aa6.48□□□□□ -1.37
CNOT1-202ENST00000441024 MON1AQ86VX9 555 aa6.48□□□□□ -1.37
CNOT1-202ENST00000441024 HJURPQ8NCD3 748 aaPredicted RBP6.48□□□□□ -1.37
CNOT1-202ENST00000441024 METTL6Q8TCB7 284 aa6.48□□□□□ -1.37
CNOT1-202ENST00000441024 ATL1Q8WXF7 558 aa6.48□□□□□ -1.37
CNOT1-202ENST00000441024 BSNDQ8WZ55 320 aa6.48□□□□□ -1.37
CNOT1-202ENST00000441024 C9orf16Q9BUW7 83 aa6.48□□□□□ -1.37
CNOT1-202ENST00000441024 FGFBP2Q9BYJ0 223 aa6.48□□□□□ -1.37
CNOT1-202ENST00000441024 CEP44Q9C0F1 390 aa6.48□□□□□ -1.37
CNOT1-202ENST00000441024 SLC39A8Q9C0K1 460 aa6.48□□□□□ -1.37
CNOT1-202ENST00000441024 VPS45Q9NRW7 570 aa6.48□□□□□ -1.37
CNOT1-202ENST00000441024 UNCXA6NJT0 531 aa6.48□□□□□ -1.37
CNOT1-202ENST00000441024 SYNCRIPO60506 623 aaKnown RBP6.48□□□□□ -1.37
CNOT1-202ENST00000441024 USP2O75604 605 aaPredicted RBP6.48□□□□□ -1.37
CNOT1-202ENST00000441024 WFS1O76024 890 aa6.48□□□□□ -1.37
CNOT1-202ENST00000441024 FGF19O95750 216 aa6.48□□□□□ -1.37
CNOT1-202ENST00000441024 FAM163BP0C2L3 166 aa6.48□□□□□ -1.37
CNOT1-202ENST00000441024 ZBTB48P10074 688 aaPredicted RBP6.48□□□□□ -1.37
CNOT1-202ENST00000441024 TRPC1P48995 793 aa6.48□□□□□ -1.37
CNOT1-202ENST00000441024 CCT8P50990 548 aa6.48□□□□□ -1.37
CNOT1-202ENST00000441024 RAB10P61026 200 aa6.48□□□□□ -1.37
CNOT1-202ENST00000441024 EPS8Q12929 822 aa6.48□□□□□ -1.37
CNOT1-202ENST00000441024 TUSC3Q13454 348 aa6.48□□□□□ -1.37
CNOT1-202ENST00000441024 DDX39BQ13838 428 aaKnown RBP6.48□□□□□ -1.37
CNOT1-202ENST00000441024 SNX30Q5VWJ9 437 aa6.48□□□□□ -1.37
CNOT1-202ENST00000441024 VSTM1Q6UX27 236 aa6.48□□□□□ -1.37
CNOT1-202ENST00000441024 UNC5AQ6ZN44 842 aa6.48□□□□□ -1.37
CNOT1-202ENST00000441024 ZNF467Q7Z7K2 595 aaPredicted RBP6.48□□□□□ -1.37
CNOT1-202ENST00000441024 SNX32Q86XE0 403 aa6.48□□□□□ -1.37
CNOT1-202ENST00000441024 FUKQ8N0W3 1084 aa6.48□□□□□ -1.37
CNOT1-202ENST00000441024 TMEM132CQ8N3T6 1108 aa6.48□□□□□ -1.37
CNOT1-202ENST00000441024 DIS3LQ8TF46 1054 aaKnown RBP6.48□□□□□ -1.37
CNOT1-202ENST00000441024 GDPD5Q8WTR4 605 aa6.48□□□□□ -1.37
CNOT1-202ENST00000441024 PRCCQ92733 491 aaPredicted RBP6.48□□□□□ -1.37
CNOT1-202ENST00000441024 UBE2E3Q969T4 207 aa6.48□□□□□ -1.37
CNOT1-202ENST00000441024 PHF21BQ96EK2 531 aa6.48□□□□□ -1.37
CNOT1-202ENST00000441024 QRFPRQ96P65 431 aa6.48□□□□□ -1.37
CNOT1-202ENST00000441024 HGH1Q9BTY7 390 aa6.48□□□□□ -1.37
CNOT1-202ENST00000441024 ATXN3LQ9H3M9 355 aa6.48□□□□□ -1.37
CNOT1-202ENST00000441024 MRPL17Q9NRX2 175 aaKnown RBP6.48□□□□□ -1.37
CNOT1-202ENST00000441024 FAM105AQ9NUU6 356 aa6.48□□□□□ -1.37
CNOT1-202ENST00000441024 TMEM216Q9P0N5 145 aa6.48□□□□□ -1.37
CNOT1-202ENST00000441024 BTBD7Q9P203 1132 aa6.48□□□□□ -1.37
CNOT1-202ENST00000441024 OPTCQ9UBM4 332 aa6.48□□□□□ -1.37
CNOT1-202ENST00000441024 C15orf41Q9Y2V0 281 aa6.48□□□□□ -1.37
CNOT1-202ENST00000441024 TRAV19A0A0A6YYK7 116 aa6.48□□□□□ -1.37
CNOT1-202ENST00000441024 CD3EAPO15446 510 aaKnown RBP6.48□□□□□ -1.37
CNOT1-202ENST00000441024 TSPAN3O60637 253 aa6.48□□□□□ -1.37
CNOT1-202ENST00000441024 PARNO95453 639 aaKnown RBP6.48□□□□□ -1.37
CNOT1-202ENST00000441024 PSMG1O95456 288 aa6.48□□□□□ -1.37
CNOT1-202ENST00000441024 LDLRP01130 860 aa6.48□□□□□ -1.37
CNOT1-202ENST00000441024 SERPINA6P08185 405 aa6.48□□□□□ -1.37
CNOT1-202ENST00000441024 ERCC2P18074 760 aa6.48□□□□□ -1.37
CNOT1-202ENST00000441024 HLA-DPA1P20036 260 aa6.48□□□□□ -1.37
CNOT1-202ENST00000441024 SNRPD1P62314 119 aaKnown RBP6.48□□□□□ -1.37
CNOT1-202ENST00000441024 USP41Q3LFD5 358 aa6.48□□□□□ -1.37
CNOT1-202ENST00000441024 PTPN20Q4JDL3 420 aa6.48□□□□□ -1.37
CNOT1-202ENST00000441024 LRRC74BQ6ZQY2 392 aa6.48□□□□□ -1.37
CNOT1-202ENST00000441024 DEFB128Q7Z7B8 93 aa6.48□□□□□ -1.37
CNOT1-202ENST00000441024 SETD9Q8NE22 299 aa6.48□□□□□ -1.37
CNOT1-202ENST00000441024 RP9Q8TA86 221 aaKnown RBP6.48□□□□□ -1.37
CNOT1-202ENST00000441024 MRPL48Q96GC5 212 aaKnown RBP6.48□□□□□ -1.37
CNOT1-202ENST00000441024 MRPL45Q9BRJ2 306 aaKnown RBP6.48□□□□□ -1.37
CNOT1-202ENST00000441024 PDGFDQ9GZP0 370 aaPredicted RBP6.48□□□□□ -1.37
CNOT1-202ENST00000441024 PDZD7Q9H5P4 517 aa6.48□□□□□ -1.37
CNOT1-202ENST00000441024 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.48□□□□□ -1.376e-7■■■■□ 19.7
CNOT1-202ENST00000441024 ZNF229Q9UJW7 825 aa6.48□□□□□ -1.37
CNOT1-202ENST00000441024 MYH15Q9Y2K3 1946 aa6.47□□□□□ -1.37
CNOT1-202ENST00000441024 GNG14A0A1W2PPG7 69 aa6.47□□□□□ -1.37
CNOT1-202ENST00000441024 BTN3A1O00481 513 aa6.47□□□□□ -1.37
CNOT1-202ENST00000441024 ZBTB14O43829 449 aa6.47□□□□□ -1.37
CNOT1-202ENST00000441024 BAIAP3O94812 1187 aa6.47□□□□□ -1.37
CNOT1-202ENST00000441024 BMP10O95393 424 aa6.47□□□□□ -1.37
CNOT1-202ENST00000441024 TGDSO95455 350 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms