RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 PAPOLAP51003 745 aaKnown RBP12.04□□□□□ -0.48
HSPG2-206ENST00000439717 RPL6Q02878 288 aaKnown RBP12.04□□□□□ -0.48
HSPG2-206ENST00000439717 IL10RBQ08334 325 aa12.04□□□□□ -0.48
HSPG2-206ENST00000439717 ANKRD20A8PQ5CZ79 823 aa12.04□□□□□ -0.48
HSPG2-206ENST00000439717 CARD16Q5EG05 197 aa12.04□□□□□ -0.48
HSPG2-206ENST00000439717 ZFYVE27Q5T4F4 411 aa12.04□□□□□ -0.48
HSPG2-206ENST00000439717 ALYREFQ86V81 257 aaKnown RBP12.04□□□□□ -0.48
HSPG2-206ENST00000439717 CACUL1Q86Y37 369 aa12.04□□□□□ -0.48
HSPG2-206ENST00000439717 NPWQ8N729 165 aa12.04□□□□□ -0.48
HSPG2-206ENST00000439717 TMIEQ8NEW7 156 aa12.04□□□□□ -0.48
HSPG2-206ENST00000439717 CADM4Q8NFZ8 388 aa12.04□□□□□ -0.48
HSPG2-206ENST00000439717 TPCN2Q8NHX9 752 aa12.04□□□□□ -0.48
HSPG2-206ENST00000439717 FOXJ1Q92949 421 aa12.04□□□□□ -0.48
HSPG2-206ENST00000439717 FAF2Q96CS3 445 aa12.04□□□□□ -0.48
HSPG2-206ENST00000439717 TOE1Q96GM8 510 aaKnown RBP12.04□□□□□ -0.48
HSPG2-206ENST00000439717 CALN1Q9BXU9 219 aa12.04□□□□□ -0.48
HSPG2-206ENST00000439717 PCED1AQ9H1Q7 454 aa12.04□□□□□ -0.48
HSPG2-206ENST00000439717 PDFQ9HBH1 243 aa12.04□□□□□ -0.48
HSPG2-206ENST00000439717 SGK2Q9HBY8 427 aa12.04□□□□□ -0.48
HSPG2-206ENST00000439717 CD93Q9NPY3 652 aa12.04□□□□□ -0.48
HSPG2-206ENST00000439717 FZD4Q9ULV1 537 aa12.04□□□□□ -0.48
HSPG2-206ENST00000439717 FCF1Q9Y324 198 aaKnown RBP12.04□□□□□ -0.48
HSPG2-206ENST00000439717 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.03□□□□□ -0.48
HSPG2-206ENST00000439717 DFFAO00273 331 aa12.03□□□□□ -0.48
HSPG2-206ENST00000439717 ARHGAP6O43182 974 aa12.03□□□□□ -0.48
HSPG2-206ENST00000439717 BNIP3LO60238 219 aa12.03□□□□□ -0.48
HSPG2-206ENST00000439717 PRNPP04156 253 aa12.03□□□□□ -0.48
HSPG2-206ENST00000439717 CHRNA3P32297 505 aa12.03□□□□□ -0.48
HSPG2-206ENST00000439717 PSMD8P48556 350 aa12.03□□□□□ -0.48
HSPG2-206ENST00000439717 SNRPD1P62314 119 aaKnown RBP12.03□□□□□ -0.48
HSPG2-206ENST00000439717 CCDC15Q0P6D6 951 aa12.03□□□□□ -0.48
HSPG2-206ENST00000439717 KIF5AQ12840 1032 aa12.03□□□□□ -0.48
HSPG2-206ENST00000439717 MMRN1Q13201 1228 aa12.03□□□□□ -0.48
HSPG2-206ENST00000439717 RFTN1Q14699 578 aaPredicted RBP12.03□□□□□ -0.48
HSPG2-206ENST00000439717 PAFAH1B3Q15102 231 aaKnown RBP12.03□□□□□ -0.48
HSPG2-206ENST00000439717 IFI16Q16666 785 aaKnown RBP12.03□□□□□ -0.48
HSPG2-206ENST00000439717 ODF2Q5BJF6 829 aa12.03□□□□□ -0.48
HSPG2-206ENST00000439717 TMCO4Q5TGY1 634 aa12.03□□□□□ -0.48
HSPG2-206ENST00000439717 DPY19L3Q6ZPD9 716 aa12.03□□□□□ -0.48
HSPG2-206ENST00000439717 DAAM2Q86T65 1068 aa12.03□□□□□ -0.48
HSPG2-206ENST00000439717 LRRC49Q8IUZ0 686 aa12.03□□□□□ -0.48
HSPG2-206ENST00000439717 LRRC8AQ8IWT6 810 aa12.03□□□□□ -0.48
HSPG2-206ENST00000439717 TMEFF1Q8IYR6 380 aa12.03□□□□□ -0.48
HSPG2-206ENST00000439717 GPR161Q8N6U8 529 aaKnown RBP12.03□□□□□ -0.48
HSPG2-206ENST00000439717 OR2AP1Q8NGE2 309 aa12.03□□□□□ -0.48
HSPG2-206ENST00000439717 PCDH19Q8TAB3 1148 aa12.03□□□□□ -0.48
HSPG2-206ENST00000439717 PIP4K2CQ8TBX8 421 aa12.03□□□□□ -0.48
HSPG2-206ENST00000439717 GANCQ8TET4 914 aa12.03□□□□□ -0.48
HSPG2-206ENST00000439717 RAPGEF5Q92565 580 aa12.03□□□□□ -0.48
HSPG2-206ENST00000439717 ZNF419Q96HQ0 510 aaPredicted RBP12.03□□□□□ -0.48
HSPG2-206ENST00000439717 LRIG1Q96JA1 1093 aa12.03□□□□□ -0.48
HSPG2-206ENST00000439717 ZNF599Q96NL3 588 aa12.03□□□□□ -0.48
HSPG2-206ENST00000439717 OMDQ99983 421 aa12.03□□□□□ -0.48
HSPG2-206ENST00000439717 HINFPQ9BQA5 517 aa12.03□□□□□ -0.48
HSPG2-206ENST00000439717 HEPHQ9BQS7 1158 aa12.03□□□□□ -0.48
HSPG2-206ENST00000439717 LACRTQ9GZZ8 138 aa12.03□□□□□ -0.48
HSPG2-206ENST00000439717 BTBD1Q9H0C5 482 aa12.03□□□□□ -0.48
HSPG2-206ENST00000439717 TNKS2Q9H2K2 1166 aa12.03□□□□□ -0.48
HSPG2-206ENST00000439717 ETNK2Q9NVF9 386 aa12.03□□□□□ -0.48
HSPG2-206ENST00000439717 KLHL11Q9NVR0 708 aa12.03□□□□□ -0.48
HSPG2-206ENST00000439717 FBXL12Q9NXK8 326 aa12.03□□□□□ -0.48
HSPG2-206ENST00000439717 UBA2Q9UBT2 640 aaPredicted RBP12.03□□□□□ -0.48
HSPG2-206ENST00000439717 IL36AQ9UHA7 158 aa12.03□□□□□ -0.48
HSPG2-206ENST00000439717 SALL4Q9UJQ4 1053 aa12.03□□□□□ -0.48
HSPG2-206ENST00000439717 ACTL7AQ9Y615 435 aa12.03□□□□□ -0.48
HSPG2-206ENST00000439717 A0A1W2PP55 124 aa12.02□□□□□ -0.49
HSPG2-206ENST00000439717 BCLAF3A2AJT9 711 aaKnown RBP12.02□□□□□ -0.49
HSPG2-206ENST00000439717 LRRD1A4D1F6 860 aa12.02□□□□□ -0.49
HSPG2-206ENST00000439717 J3KR12 359 aa12.02□□□□□ -0.49
HSPG2-206ENST00000439717 SLC7A4O43246 635 aa12.02□□□□□ -0.49
HSPG2-206ENST00000439717 NRDCO43847 1150 aa12.02□□□□□ -0.49
HSPG2-206ENST00000439717 RNASEH2AO75792 299 aaKnown RBP12.02□□□□□ -0.49
HSPG2-206ENST00000439717 TMCC1O94876 653 aa12.02□□□□□ -0.49
HSPG2-206ENST00000439717 KRT1P04264 644 aa12.02□□□□□ -0.49
HSPG2-206ENST00000439717 HOXD11P31277 338 aaPredicted RBP12.02□□□□□ -0.49
HSPG2-206ENST00000439717 DHPSP49366 369 aaPredicted RBP12.02□□□□□ -0.49
HSPG2-206ENST00000439717 DNA2P51530 1060 aa12.02□□□□□ -0.49
HSPG2-206ENST00000439717 CCNHP51946 323 aaPredicted RBP12.02□□□□□ -0.49
HSPG2-206ENST00000439717 NAP1L1P55209 391 aaKnown RBP12.02□□□□□ -0.49
HSPG2-206ENST00000439717 LYSMD4Q5XG99 296 aa12.02□□□□□ -0.49
HSPG2-206ENST00000439717 LEKR1Q6ZMV7 388 aa12.02□□□□□ -0.49
HSPG2-206ENST00000439717 HDDC3Q8N4P3 179 aa12.02□□□□□ -0.49
HSPG2-206ENST00000439717 AADATQ8N5Z0 425 aa12.02□□□□□ -0.49
HSPG2-206ENST00000439717 CHST14Q8NCH0 376 aa12.02□□□□□ -0.49
HSPG2-206ENST00000439717 FAM131CQ96AQ9 280 aa12.02□□□□□ -0.49
HSPG2-206ENST00000439717 PPP1R16AQ96I34 528 aa12.02□□□□□ -0.49
HSPG2-206ENST00000439717 RNF157Q96PX1 679 aa12.02□□□□□ -0.49
HSPG2-206ENST00000439717 DESI2Q9BSY9 194 aa12.02□□□□□ -0.49
HSPG2-206ENST00000439717 GPR174Q9BXC1 333 aa12.02□□□□□ -0.49
HSPG2-206ENST00000439717 MAK16Q9BXY0 300 aaKnown RBP12.02□□□□□ -0.49
HSPG2-206ENST00000439717 TSGA10Q9BZW7 698 aa12.02□□□□□ -0.49
HSPG2-206ENST00000439717 SP110Q9HB58 689 aa12.02□□□□□ -0.49
HSPG2-206ENST00000439717 HECAQ9UBI9 543 aaPredicted RBP12.02□□□□□ -0.49
HSPG2-206ENST00000439717 IPO11Q9UI26 975 aaKnown RBP12.02□□□□□ -0.49
HSPG2-206ENST00000439717 SARDHQ9UL12 918 aa12.02□□□□□ -0.49
HSPG2-206ENST00000439717 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.02□□□□□ -0.49
HSPG2-206ENST00000439717 MFHAS1Q9Y4C4 1052 aa12.02□□□□□ -0.49
HSPG2-206ENST00000439717 HYOU1Q9Y4L1 999 aa12.02□□□□□ -0.49
HSPG2-206ENST00000439717 DUSP10Q9Y6W6 482 aa12.02□□□□□ -0.49
HSPG2-206ENST00000439717 USP34Q70CQ2 3546 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms