RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 RCAN3Q9UKA8 241 aa11.42□□□□□ -0.58
RTN4-211ENST00000438462 SCML2Q9UQR0 700 aa11.42□□□□□ -0.58
RTN4-211ENST00000438462 NTNG1Q9Y2I2 539 aa11.42□□□□□ -0.58
RTN4-211ENST00000438462 MXRA5Q9NR99 2828 aa11.42□□□□□ -0.58
RTN4-211ENST00000438462 A0A1B0GUH1 482 aa11.41□□□□□ -0.58
RTN4-211ENST00000438462 RNF212BA8MTL3 300 aa11.41□□□□□ -0.58
RTN4-211ENST00000438462 K7ENM7 598 aa11.41□□□□□ -0.58
RTN4-211ENST00000438462 BEST1O76090 585 aa11.41□□□□□ -0.58
RTN4-211ENST00000438462 SRPRAP08240 638 aaKnown RBP11.41□□□□□ -0.58
RTN4-211ENST00000438462 GLB1P16278 677 aa11.41□□□□□ -0.58
RTN4-211ENST00000438462 CCL11P51671 97 aa11.41□□□□□ -0.58
RTN4-211ENST00000438462 HNRNPUQ00839 825 aaKnown RBP eCLIP11.41□□□□□ -0.583e-6■□□□□ 10
RTN4-211ENST00000438462 FOXM1Q08050 763 aa11.41□□□□□ -0.58
RTN4-211ENST00000438462 AMZ1Q400G9 498 aa11.41□□□□□ -0.58
RTN4-211ENST00000438462 CERCAMQ5T4B2 595 aa11.41□□□□□ -0.58
RTN4-211ENST00000438462 FAXCQ5TGI0 409 aa11.41□□□□□ -0.58
RTN4-211ENST00000438462 FAM46CQ5VWP2 391 aa11.41□□□□□ -0.58
RTN4-211ENST00000438462 CLEC9AQ6UXN8 241 aa11.41□□□□□ -0.58
RTN4-211ENST00000438462 RHOT1Q8IXI2 618 aa11.41□□□□□ -0.58
RTN4-211ENST00000438462 CACTINQ8WUQ7 758 aaKnown RBP11.41□□□□□ -0.58
RTN4-211ENST00000438462 TMA16Q96EY4 203 aaKnown RBP11.41□□□□□ -0.58
RTN4-211ENST00000438462 LMLNQ96KR4 655 aa11.41□□□□□ -0.58
RTN4-211ENST00000438462 RPL10LQ96L21 214 aaKnown RBP11.41□□□□□ -0.58
RTN4-211ENST00000438462 TEFMQ96QE5 360 aaKnown RBP11.41□□□□□ -0.58
RTN4-211ENST00000438462 SMOQ99835 787 aa11.41□□□□□ -0.58
RTN4-211ENST00000438462 TIPINQ9BVW5 301 aa11.41□□□□□ -0.58
RTN4-211ENST00000438462 TRIT1Q9H3H1 467 aaKnown RBP11.41□□□□□ -0.58
RTN4-211ENST00000438462 SEMA3GQ9NS98 782 aa11.41□□□□□ -0.58
RTN4-211ENST00000438462 TMEM184BQ9Y519 407 aaPredicted RBP11.41□□□□□ -0.58
RTN4-211ENST00000438462 TRPM6Q9BX84 2022 aa11.4□□□□□ -0.58
RTN4-211ENST00000438462 B4E171 279 aa11.4□□□□□ -0.58
RTN4-211ENST00000438462 C1QTNF3-AMACRE9PGA6 284 aa11.4□□□□□ -0.58
RTN4-211ENST00000438462 C19orf84I3L1E1 186 aa11.4□□□□□ -0.58
RTN4-211ENST00000438462 KATNA1O75449 491 aa11.4□□□□□ -0.58
RTN4-211ENST00000438462 PCDH8O95206 1070 aa11.4□□□□□ -0.58
RTN4-211ENST00000438462 PNLIPP16233 465 aa11.4□□□□□ -0.58
RTN4-211ENST00000438462 PCSK6P29122 969 aa11.4□□□□□ -0.58
RTN4-211ENST00000438462 DNAJA1P31689 397 aaKnown RBP11.4□□□□□ -0.58
RTN4-211ENST00000438462 TSPAN7P41732 249 aa11.4□□□□□ -0.58
RTN4-211ENST00000438462 STK19P49842 368 aaPredicted RBP11.4□□□□□ -0.58
RTN4-211ENST00000438462 POU5F1Q01860 360 aaKnown RBP11.4□□□□□ -0.58
RTN4-211ENST00000438462 PLEKHN1Q494U1 663 aaPredicted RBP11.4□□□□□ -0.58
RTN4-211ENST00000438462 TMEM259Q4ZIN3 620 aa11.4□□□□□ -0.58
RTN4-211ENST00000438462 RNF219Q5W0B1 726 aaPredicted RBP11.4□□□□□ -0.58
RTN4-211ENST00000438462 DYMQ7RTS9 669 aa11.4□□□□□ -0.58
RTN4-211ENST00000438462 CEP97Q8IW35 865 aa11.4□□□□□ -0.58
RTN4-211ENST00000438462 MFN1Q8IWA4 741 aa11.4□□□□□ -0.58
RTN4-211ENST00000438462 PARP9Q8IXQ6 854 aa11.4□□□□□ -0.58
RTN4-211ENST00000438462 FSTL5Q8N475 847 aaPredicted RBP11.4□□□□□ -0.58
RTN4-211ENST00000438462 TNFRSF25Q93038 417 aa11.4□□□□□ -0.58
RTN4-211ENST00000438462 JAKMIP2Q96AA8 810 aa11.4□□□□□ -0.58
RTN4-211ENST00000438462 BARD1Q99728 777 aaKnown RBP11.4□□□□□ -0.58
RTN4-211ENST00000438462 ACSS2Q9NR19 701 aa11.4□□□□□ -0.58
RTN4-211ENST00000438462 CEP83Q9Y592 693 aa11.4□□□□□ -0.58
RTN4-211ENST00000438462 PCDHGB7Q9Y5F8 929 aa11.4□□□□□ -0.58
RTN4-211ENST00000438462 COPG1Q9Y678 874 aaKnown RBP11.4□□□□□ -0.58
RTN4-211ENST00000438462 ANK2Q01484 3957 aa11.4□□□□□ -0.58
RTN4-211ENST00000438462 LRP4O75096 1905 aa11.4□□□□□ -0.58
RTN4-211ENST00000438462 A8MXQ7 604 aa11.39□□□□□ -0.59
RTN4-211ENST00000438462 M0QYT0 321 aa11.39□□□□□ -0.59
RTN4-211ENST00000438462 E2F3O00716 465 aa11.39□□□□□ -0.59
RTN4-211ENST00000438462 TBL1XO60907 577 aa11.39□□□□□ -0.59
RTN4-211ENST00000438462 DLGAP3O95886 979 aa11.39□□□□□ -0.59
RTN4-211ENST00000438462 HEXAP06865 529 aa11.39□□□□□ -0.59
RTN4-211ENST00000438462 TMEM191BP0C7N4 346 aa11.39□□□□□ -0.59
RTN4-211ENST00000438462 RALAP11233 206 aa11.39□□□□□ -0.59
RTN4-211ENST00000438462 MAP3K7CLP57077 242 aa11.39□□□□□ -0.59
RTN4-211ENST00000438462 ZNF445P59923 1031 aa11.39□□□□□ -0.59
RTN4-211ENST00000438462 NUCB1Q02818 461 aa11.39□□□□□ -0.59
RTN4-211ENST00000438462 ARHGEF7Q14155 803 aa11.39□□□□□ -0.59
RTN4-211ENST00000438462 ELOCQ15369 112 aa11.39□□□□□ -0.59
RTN4-211ENST00000438462 RNF20Q5VTR2 975 aa11.39□□□□□ -0.59
RTN4-211ENST00000438462 LVRNQ6Q4G3 990 aa11.39□□□□□ -0.59
RTN4-211ENST00000438462 MRGPRGQ86SM5 289 aa11.39□□□□□ -0.59
RTN4-211ENST00000438462 BRSK2Q8IWQ3 736 aa11.39□□□□□ -0.59
RTN4-211ENST00000438462 ESX1Q8N693 406 aa11.39□□□□□ -0.59
RTN4-211ENST00000438462 BMPERQ8N8U9 685 aa11.39□□□□□ -0.59
RTN4-211ENST00000438462 GPR156Q8NFN8 814 aa11.39□□□□□ -0.59
RTN4-211ENST00000438462 DNAJB8Q8NHS0 232 aa11.39□□□□□ -0.59
RTN4-211ENST00000438462 OR8D1Q8WZ84 308 aa11.39□□□□□ -0.59
RTN4-211ENST00000438462 KCNN1Q92952 543 aa11.39□□□□□ -0.59
RTN4-211ENST00000438462 FEM1CQ96JP0 617 aa11.39□□□□□ -0.59
RTN4-211ENST00000438462 LRIT1Q9P2V4 623 aa11.39□□□□□ -0.59
RTN4-211ENST00000438462 ADAM21Q9UKJ8 722 aa11.39□□□□□ -0.59
RTN4-211ENST00000438462 DNM3Q9UQ16 869 aa11.39□□□□□ -0.59
RTN4-211ENST00000438462 R3HCC1Q9Y3T6 440 aaKnown RBP11.39□□□□□ -0.59
RTN4-211ENST00000438462 FRMD3A2A2Y4 597 aa11.38□□□□□ -0.59
RTN4-211ENST00000438462 PIPSLA2A3N6 862 aa11.38□□□□□ -0.59
RTN4-211ENST00000438462 ARGFXA6NJG6 315 aa11.38□□□□□ -0.59
RTN4-211ENST00000438462 PP2D1A8MPX8 630 aa11.38□□□□□ -0.59
RTN4-211ENST00000438462 FPGTO14772 594 aa11.38□□□□□ -0.59
RTN4-211ENST00000438462 TACC1O75410 805 aa11.38□□□□□ -0.59
RTN4-211ENST00000438462 PAK4O96013 591 aaPredicted RBP11.38□□□□□ -0.59
RTN4-211ENST00000438462 STSP08842 583 aa11.38□□□□□ -0.59
RTN4-211ENST00000438462 ALPIP09923 528 aa11.38□□□□□ -0.59
RTN4-211ENST00000438462 PDIA3P30101 505 aaKnown RBP11.38□□□□□ -0.59
RTN4-211ENST00000438462 MCM7P33993 719 aa11.38□□□□□ -0.59
RTN4-211ENST00000438462 MEOX1P50221 254 aa11.38□□□□□ -0.59
RTN4-211ENST00000438462 THOP1P52888 689 aa11.38□□□□□ -0.59
RTN4-211ENST00000438462 PFN3P60673 137 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms