RNA–Protein interactions for RNA: ENST00000438014.5

R3HDM1-208, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-208ENST00000438014 IKZF4Q9H2S9 585 aa8.62□□□□□ -1.03
R3HDM1-208ENST00000438014 PABPC3Q9H361 631 aaKnown RBP8.62□□□□□ -1.03
R3HDM1-208ENST00000438014 PCIF1Q9H4Z3 704 aa8.62□□□□□ -1.03
R3HDM1-208ENST00000438014 EBF2Q9HAK2 575 aa8.62□□□□□ -1.03
R3HDM1-208ENST00000438014 BLOC1S4Q9NUP1 217 aa8.62□□□□□ -1.03
R3HDM1-208ENST00000438014 PAXBP1Q9Y5B6 917 aa8.62□□□□□ -1.03
R3HDM1-208ENST00000438014 NME7Q9Y5B8 376 aa8.62□□□□□ -1.03
R3HDM1-208ENST00000438014 MYLKQ15746 1914 aa8.62□□□□□ -1.03
R3HDM1-208ENST00000438014 ATMQ13315 3056 aa8.62□□□□□ -1.03
R3HDM1-208ENST00000438014 TRIM38O00635 465 aa8.61□□□□□ -1.03
R3HDM1-208ENST00000438014 RNGTTO60942 597 aaKnown RBP8.61□□□□□ -1.03
R3HDM1-208ENST00000438014 CST3P01034 146 aaPredicted RBP8.61□□□□□ -1.03
R3HDM1-208ENST00000438014 KLKB1P03952 638 aa8.61□□□□□ -1.03
R3HDM1-208ENST00000438014 CKMT1AP12532 417 aa8.61□□□□□ -1.03
R3HDM1-208ENST00000438014 GAP43P17677 238 aa8.61□□□□□ -1.03
R3HDM1-208ENST00000438014 ITGB6P18564 788 aa8.61□□□□□ -1.03
R3HDM1-208ENST00000438014 ATICP31939 592 aa8.61□□□□□ -1.03
R3HDM1-208ENST00000438014 DDIT3P35638 169 aa8.61□□□□□ -1.03
R3HDM1-208ENST00000438014 NUDT1P36639 197 aa8.61□□□□□ -1.03
R3HDM1-208ENST00000438014 GMPRP36959 345 aa8.61□□□□□ -1.03
R3HDM1-208ENST00000438014 PMS1P54277 932 aaKnown RBP8.61□□□□□ -1.03
R3HDM1-208ENST00000438014 GYS2P54840 703 aa8.61□□□□□ -1.03
R3HDM1-208ENST00000438014 NFKB2Q00653 900 aa8.61□□□□□ -1.03
R3HDM1-208ENST00000438014 TLE1Q04724 770 aa8.61□□□□□ -1.03
R3HDM1-208ENST00000438014 TRPC3Q13507 836 aa8.61□□□□□ -1.03
R3HDM1-208ENST00000438014 ALCAMQ13740 583 aa8.61□□□□□ -1.03
R3HDM1-208ENST00000438014 TCEA2Q15560 299 aa8.61□□□□□ -1.03
R3HDM1-208ENST00000438014 NKG7Q16617 165 aa8.61□□□□□ -1.03
R3HDM1-208ENST00000438014 MPPE1Q53F39 396 aa8.61□□□□□ -1.03
R3HDM1-208ENST00000438014 PAQR9Q6ZVX9 377 aa8.61□□□□□ -1.03
R3HDM1-208ENST00000438014 CHST9Q7L1S5 443 aa8.61□□□□□ -1.03
R3HDM1-208ENST00000438014 PRPF39Q86UA1 669 aaKnown RBP8.61□□□□□ -1.03
R3HDM1-208ENST00000438014 SFR1Q86XK3 245 aa8.61□□□□□ -1.03
R3HDM1-208ENST00000438014 ARL14Q8N4G2 192 aa8.61□□□□□ -1.03
R3HDM1-208ENST00000438014 ZNF366Q8N895 744 aa8.61□□□□□ -1.03
R3HDM1-208ENST00000438014 CYB5D2Q8WUJ1 264 aa8.61□□□□□ -1.03
R3HDM1-208ENST00000438014 LARP4BQ92615 738 aaKnown RBP8.61□□□□□ -1.03
R3HDM1-208ENST00000438014 P2RY11Q96G91 374 aa8.61□□□□□ -1.03
R3HDM1-208ENST00000438014 SMOQ99835 787 aa8.61□□□□□ -1.03
R3HDM1-208ENST00000438014 OMDQ99983 421 aa8.61□□□□□ -1.03
R3HDM1-208ENST00000438014 DPH2Q9BQC3 489 aaPredicted RBP8.61□□□□□ -1.03
R3HDM1-208ENST00000438014 CBWD1Q9BRT8 395 aa8.61□□□□□ -1.03
R3HDM1-208ENST00000438014 RSPH9Q9H1X1 276 aaPredicted RBP8.61□□□□□ -1.03
R3HDM1-208ENST00000438014 NEUROG2Q9H2A3 272 aa8.61□□□□□ -1.03
R3HDM1-208ENST00000438014 USP29Q9HBJ7 922 aa8.61□□□□□ -1.03
R3HDM1-208ENST00000438014 KIAA1586Q9HCI6 787 aa8.61□□□□□ -1.03
R3HDM1-208ENST00000438014 SSU72Q9NP77 194 aaKnown RBP8.61□□□□□ -1.03
R3HDM1-208ENST00000438014 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.61□□□□□ -1.03
R3HDM1-208ENST00000438014 SUCOQ9UBS9 1254 aaKnown RBP8.61□□□□□ -1.03
R3HDM1-208ENST00000438014 CLEC4EQ9ULY5 219 aa8.61□□□□□ -1.03
R3HDM1-208ENST00000438014 PCDHGA8Q9Y5G5 932 aa8.61□□□□□ -1.03
R3HDM1-208ENST00000438014 TMEM131Q92545 1883 aa8.61□□□□□ -1.03
R3HDM1-208ENST00000438014 NUMA1Q14980 2115 aa8.6□□□□□ -1.03
R3HDM1-208ENST00000438014 NOTCH2Q04721 2471 aa8.6□□□□□ -1.03
R3HDM1-208ENST00000438014 ANKRD17O75179 2603 aaKnown RBP8.6□□□□□ -1.03
R3HDM1-208ENST00000438014 TEX15Q9BXT5 2789 aa8.6□□□□□ -1.03
R3HDM1-208ENST00000438014 MDM4O15151 490 aa8.6□□□□□ -1.03
R3HDM1-208ENST00000438014 CYP26A1O43174 497 aa8.6□□□□□ -1.03
R3HDM1-208ENST00000438014 PPFIA2O75334 1257 aa8.6□□□□□ -1.03
R3HDM1-208ENST00000438014 RNASEH2AO75792 299 aaKnown RBP8.6□□□□□ -1.03
R3HDM1-208ENST00000438014 GCNT3O95395 438 aa8.6□□□□□ -1.03
R3HDM1-208ENST00000438014 DLDP09622 509 aaKnown RBP8.6□□□□□ -1.03
R3HDM1-208ENST00000438014 ALPPL2P10696 532 aa8.6□□□□□ -1.03
R3HDM1-208ENST00000438014 DRD2P14416 443 aa8.6□□□□□ -1.03
R3HDM1-208ENST00000438014 TNNI1P19237 187 aa8.6□□□□□ -1.03
R3HDM1-208ENST00000438014 TRIM21P19474 475 aaKnown RBP8.6□□□□□ -1.03
R3HDM1-208ENST00000438014 CORO1AP31146 461 aaKnown RBP8.6□□□□□ -1.03
R3HDM1-208ENST00000438014 AFMP43652 599 aa8.6□□□□□ -1.03
R3HDM1-208ENST00000438014 CCR10P46092 362 aa8.6□□□□□ -1.03
R3HDM1-208ENST00000438014 HARS2P49590 506 aaKnown RBP8.6□□□□□ -1.03
R3HDM1-208ENST00000438014 NEK4P51957 841 aa8.6□□□□□ -1.03
R3HDM1-208ENST00000438014 MAP3K7CLP57077 242 aa8.6□□□□□ -1.03
R3HDM1-208ENST00000438014 SLBPQ14493 270 aaKnown RBP eCLIP8.6□□□□□ -1.03
R3HDM1-208ENST00000438014 STAT4Q14765 748 aa8.6□□□□□ -1.03
R3HDM1-208ENST00000438014 ISXQ2M1V0 245 aa8.6□□□□□ -1.03
R3HDM1-208ENST00000438014 C3orf38Q5JPI3 329 aa8.6□□□□□ -1.03
R3HDM1-208ENST00000438014 NAPEPLDQ6IQ20 393 aa8.6□□□□□ -1.03
R3HDM1-208ENST00000438014 FDX2Q6P4F2 183 aa8.6□□□□□ -1.03
R3HDM1-208ENST00000438014 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.6□□□□□ -1.03
R3HDM1-208ENST00000438014 AHI1Q8N157 1196 aa8.6□□□□□ -1.03
R3HDM1-208ENST00000438014 ZMIZ2Q8NF64 920 aa8.6□□□□□ -1.03
R3HDM1-208ENST00000438014 OR4C6Q8NH72 309 aa8.6□□□□□ -1.03
R3HDM1-208ENST00000438014 MAPK15Q8TD08 544 aa8.6□□□□□ -1.03
R3HDM1-208ENST00000438014 ISL2Q96A47 359 aa8.6□□□□□ -1.03
R3HDM1-208ENST00000438014 SYAP1Q96A49 352 aaPredicted RBP8.6□□□□□ -1.03
R3HDM1-208ENST00000438014 SGF29Q96ES7 293 aa8.6□□□□□ -1.03
R3HDM1-208ENST00000438014 CSNK1G1Q9HCP0 422 aa8.6□□□□□ -1.03
R3HDM1-208ENST00000438014 OSER1Q9NX31 292 aa8.6□□□□□ -1.03
R3HDM1-208ENST00000438014 NUDT5Q9UKK9 219 aa8.6□□□□□ -1.03
R3HDM1-208ENST00000438014 AGO1Q9UL18 857 aaKnown RBP8.6□□□□□ -1.03
R3HDM1-208ENST00000438014 FZD4Q9ULV1 537 aa8.6□□□□□ -1.03
R3HDM1-208ENST00000438014 SATB2Q9UPW6 733 aa8.6□□□□□ -1.03
R3HDM1-208ENST00000438014 MAN2B2Q9Y2E5 1009 aa8.6□□□□□ -1.03
R3HDM1-208ENST00000438014 PCDHA5Q9Y5H7 936 aa8.6□□□□□ -1.03
R3HDM1-208ENST00000438014 MYO9AB2RTY4 2548 aa8.6□□□□□ -1.03
R3HDM1-208ENST00000438014 TBC1D3DA0A087WVF3 549 aa8.59□□□□□ -1.03
R3HDM1-208ENST00000438014 TBC1D3IA0A087WXS9 549 aa8.59□□□□□ -1.03
R3HDM1-208ENST00000438014 TBC1D3EA0A087X179 549 aa8.59□□□□□ -1.03
R3HDM1-208ENST00000438014 TBC1D3KA0A087X1G2 549 aa8.59□□□□□ -1.03
R3HDM1-208ENST00000438014 TBC1D3FA6NER0 549 aaPredicted RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms