RNA–Protein interactions for RNA: ENST00000437681.1

SNHG3-202, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 2 BASIC

Gene SNHG3, Length 2,614 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-202ENST00000437681 DKK3Q9UBP4 350 aa11.7□□□□□ -0.54
SNHG3-202ENST00000437681 UBA2Q9UBT2 640 aaPredicted RBP11.7□□□□□ -0.54
SNHG3-202ENST00000437681 SEPT3Q9UH03 358 aa11.7□□□□□ -0.54
SNHG3-202ENST00000437681 TSPAN11A1L157 253 aa11.7□□□□□ -0.54
SNHG3-202ENST00000437681 TMEM110-MUSTN1A8MSY1 372 aa11.7□□□□□ -0.54
SNHG3-202ENST00000437681 APOC4-APOC2K7ER74 178 aa11.7□□□□□ -0.54
SNHG3-202ENST00000437681 MCF2LO15068 1137 aa11.7□□□□□ -0.54
SNHG3-202ENST00000437681 BUB1O43683 1085 aa11.7□□□□□ -0.54
SNHG3-202ENST00000437681 KIF5CO60282 957 aa11.7□□□□□ -0.54
SNHG3-202ENST00000437681 PDGFBP01127 241 aaPredicted RBP11.7□□□□□ -0.54
SNHG3-202ENST00000437681 APOC2P02655 101 aa11.7□□□□□ -0.54
SNHG3-202ENST00000437681 PRNPP04156 253 aa11.7□□□□□ -0.54
SNHG3-202ENST00000437681 TCF4P15884 667 aa11.7□□□□□ -0.54
SNHG3-202ENST00000437681 GARSP41250 739 aaKnown RBP11.7□□□□□ -0.54
SNHG3-202ENST00000437681 IL12RB1P42701 662 aa11.7□□□□□ -0.54
SNHG3-202ENST00000437681 ARF5P84085 180 aa11.7□□□□□ -0.54
SNHG3-202ENST00000437681 GAS6Q14393 721 aa11.7□□□□□ -0.54
SNHG3-202ENST00000437681 RPS6KA1Q15418 735 aa11.7□□□□□ -0.54
SNHG3-202ENST00000437681 TXNRD3NBQ6F5E7 133 aa11.7□□□□□ -0.54
SNHG3-202ENST00000437681 SERPINA13PQ6UXR4 307 aa11.7□□□□□ -0.54
SNHG3-202ENST00000437681 ALLCQ8N6M5 410 aa11.7□□□□□ -0.54
SNHG3-202ENST00000437681 TXNDC5Q8NBS9 432 aaKnown RBP11.7□□□□□ -0.54
SNHG3-202ENST00000437681 TSTD1Q8NFU3 115 aa11.7□□□□□ -0.54
SNHG3-202ENST00000437681 OR8D1Q8WZ84 308 aa11.7□□□□□ -0.54
SNHG3-202ENST00000437681 ITFG2Q969R8 447 aa11.7□□□□□ -0.54
SNHG3-202ENST00000437681 HAUS1Q96CS2 278 aa11.7□□□□□ -0.54
SNHG3-202ENST00000437681 CIPCQ9C0C6 399 aa11.7□□□□□ -0.54
SNHG3-202ENST00000437681 SLC39A8Q9C0K1 460 aa11.7□□□□□ -0.54
SNHG3-202ENST00000437681 RASSF4Q9H2L5 321 aa11.7□□□□□ -0.54
SNHG3-202ENST00000437681 USP36Q9P275 1121 aaKnown RBP11.7□□□□□ -0.54
SNHG3-202ENST00000437681 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.69□□□□□ -0.54
SNHG3-202ENST00000437681 CFAP69A5D8W1 941 aa11.69□□□□□ -0.54
SNHG3-202ENST00000437681 C1QTNF3-AMACRE9PGA6 284 aa11.69□□□□□ -0.54
SNHG3-202ENST00000437681 MATN3O15232 486 aa11.69□□□□□ -0.54
SNHG3-202ENST00000437681 PI15O43692 258 aa11.69□□□□□ -0.54
SNHG3-202ENST00000437681 C5AR1P21730 350 aa11.69□□□□□ -0.54
SNHG3-202ENST00000437681 TIE1P35590 1138 aa11.69□□□□□ -0.54
SNHG3-202ENST00000437681 AP1S1P61966 158 aa11.69□□□□□ -0.54
SNHG3-202ENST00000437681 RAD51Q06609 339 aa11.69□□□□□ -0.54
SNHG3-202ENST00000437681 SMTNL2Q2TAL5 461 aa11.69□□□□□ -0.54
SNHG3-202ENST00000437681 KCNT1Q5JUK3 1230 aa11.69□□□□□ -0.54
SNHG3-202ENST00000437681 C9orf64Q5T6V5 341 aa11.69□□□□□ -0.54
SNHG3-202ENST00000437681 IL31Q6EBC2 164 aa11.69□□□□□ -0.54
SNHG3-202ENST00000437681 C22orf39Q6P5X5 142 aa11.69□□□□□ -0.54
SNHG3-202ENST00000437681 DRICH1Q6PGQ1 229 aaPredicted RBP11.69□□□□□ -0.54
SNHG3-202ENST00000437681 CHPFQ8IZ52 775 aa11.69□□□□□ -0.54
SNHG3-202ENST00000437681 MAML2Q8IZL2 1156 aaPredicted RBP11.69□□□□□ -0.54
SNHG3-202ENST00000437681 ATPAF2Q8N5M1 289 aa11.69□□□□□ -0.54
SNHG3-202ENST00000437681 ST13P5Q8NFI4 369 aaPredicted RBP11.69□□□□□ -0.54
SNHG3-202ENST00000437681 RAB7BQ96AH8 199 aa11.69□□□□□ -0.54
SNHG3-202ENST00000437681 HMCESQ96FZ2 354 aa11.69□□□□□ -0.54
SNHG3-202ENST00000437681 ZNF641Q96N77 438 aaPredicted RBP11.69□□□□□ -0.54
SNHG3-202ENST00000437681 NAP1L3Q99457 506 aaPredicted RBP11.69□□□□□ -0.54
SNHG3-202ENST00000437681 CALN1Q9BXU9 219 aa11.69□□□□□ -0.54
SNHG3-202ENST00000437681 GUCA1BQ9UMX6 200 aa11.69□□□□□ -0.54
SNHG3-202ENST00000437681 HCN4Q9Y3Q4 1203 aa11.69□□□□□ -0.54
SNHG3-202ENST00000437681 DUSP10Q9Y6W6 482 aa11.69□□□□□ -0.54
SNHG3-202ENST00000437681 MACROD2A1Z1Q3 448 aa11.69□□□□□ -0.54
SNHG3-202ENST00000437681 PROB1E7EW31 1015 aa11.69□□□□□ -0.54
SNHG3-202ENST00000437681 SCAMP3O14828 347 aaKnown RBP11.69□□□□□ -0.54
SNHG3-202ENST00000437681 IGSF6O95976 241 aa11.69□□□□□ -0.54
SNHG3-202ENST00000437681 AMPD1P23109 780 aa11.69□□□□□ -0.54
SNHG3-202ENST00000437681 NFKBIAP25963 317 aa11.69□□□□□ -0.54
SNHG3-202ENST00000437681 PAPOLAP51003 745 aaKnown RBP11.69□□□□□ -0.54
SNHG3-202ENST00000437681 CARD16Q5EG05 197 aa11.69□□□□□ -0.54
SNHG3-202ENST00000437681 C1QTNF12Q5T7M4 302 aa11.69□□□□□ -0.54
SNHG3-202ENST00000437681 SEL1L2Q5TEA6 688 aa11.69□□□□□ -0.54
SNHG3-202ENST00000437681 ARMC3Q5W041 872 aa11.69□□□□□ -0.54
SNHG3-202ENST00000437681 NEK5Q6P3R8 708 aa11.69□□□□□ -0.54
SNHG3-202ENST00000437681 C4orf22Q6V702 233 aa11.69□□□□□ -0.54
SNHG3-202ENST00000437681 TFAP2DQ7Z6R9 452 aa11.69□□□□□ -0.54
SNHG3-202ENST00000437681 CIR1Q86X95 450 aaPredicted RBP11.69□□□□□ -0.54
SNHG3-202ENST00000437681 PLD5Q8N7P1 536 aa11.69□□□□□ -0.54
SNHG3-202ENST00000437681 OR52K2Q8NGK3 314 aa11.69□□□□□ -0.54
SNHG3-202ENST00000437681 PPP1R16AQ96I34 528 aa11.69□□□□□ -0.54
SNHG3-202ENST00000437681 GDAP1L1Q96MZ0 367 aa11.69□□□□□ -0.54
SNHG3-202ENST00000437681 PSKH2Q96QS6 385 aa11.69□□□□□ -0.54
SNHG3-202ENST00000437681 HDAC8Q9BY41 377 aa11.69□□□□□ -0.54
SNHG3-202ENST00000437681 SGK2Q9HBY8 427 aa11.69□□□□□ -0.54
SNHG3-202ENST00000437681 PRSS16Q9NQE7 514 aa11.69□□□□□ -0.54
SNHG3-202ENST00000437681 RNF14Q9UBS8 474 aa11.69□□□□□ -0.54
SNHG3-202ENST00000437681 DNPEPQ9ULA0 475 aa11.69□□□□□ -0.54
SNHG3-202ENST00000437681 RPS6KL1Q9Y6S9 549 aa11.69□□□□□ -0.54
SNHG3-202ENST00000437681 SGK1O00141 431 aa11.68□□□□□ -0.54
SNHG3-202ENST00000437681 MAFKO60675 156 aa11.68□□□□□ -0.54
SNHG3-202ENST00000437681 POP4O95707 220 aaKnown RBP11.68□□□□□ -0.54
SNHG3-202ENST00000437681 SP9P0CG40 484 aa11.68□□□□□ -0.54
SNHG3-202ENST00000437681 COPAP53621 1224 aa11.68□□□□□ -0.54
SNHG3-202ENST00000437681 PRKD1Q15139 912 aaPredicted RBP11.68□□□□□ -0.54
SNHG3-202ENST00000437681 MFSD7Q6UXD7 560 aa11.68□□□□□ -0.54
SNHG3-202ENST00000437681 FAM174AQ8TBP5 190 aa11.68□□□□□ -0.54
SNHG3-202ENST00000437681 ZC3H10Q96K80 434 aaKnown RBP11.68□□□□□ -0.54
SNHG3-202ENST00000437681 SPACA7Q96KW9 195 aa11.68□□□□□ -0.54
SNHG3-202ENST00000437681 SRPK1Q96SB4 655 aaKnown RBP11.68□□□□□ -0.54
SNHG3-202ENST00000437681 SP110Q9HB58 689 aa11.68□□□□□ -0.54
SNHG3-202ENST00000437681 ITM2CQ9NQX7 267 aa11.68□□□□□ -0.54
SNHG3-202ENST00000437681 CACNA2D2Q9NY47 1150 aa11.68□□□□□ -0.54
SNHG3-202ENST00000437681 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.68□□□□□ -0.54
SNHG3-202ENST00000437681 IPO11Q9UI26 975 aaKnown RBP11.68□□□□□ -0.54
SNHG3-202ENST00000437681 DNAI1Q9UI46 699 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms