RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 ANXA5P08758 320 aa16.07■□□□□ 0.16
PTPN13-204ENST00000436978 LTA4HP09960 611 aaKnown RBP16.07■□□□□ 0.16
PTPN13-204ENST00000436978 CLCN5P51795 746 aa16.07■□□□□ 0.16
PTPN13-204ENST00000436978 NECAB2Q7Z6G3 386 aa16.07■□□□□ 0.16
PTPN13-204ENST00000436978 GRIN3AQ8TCU5 1115 aa16.07■□□□□ 0.16
PTPN13-204ENST00000436978 HEXDCQ8WVB3 486 aa16.07■□□□□ 0.16
PTPN13-204ENST00000436978 ELMO1Q92556 727 aa16.07■□□□□ 0.16
PTPN13-204ENST00000436978 NRDE2Q9H7Z3 1164 aa16.07■□□□□ 0.16
PTPN13-204ENST00000436978 ARIH1Q9Y4X5 557 aaPredicted RBP16.07■□□□□ 0.16
PTPN13-204ENST00000436978 ZDHHC20Q5W0Z9 365 aa16.06■□□□□ 0.16
PTPN13-204ENST00000436978 TRPC4APQ8TEL6 797 aa16.06■□□□□ 0.16
PTPN13-204ENST00000436978 MTMR8Q96EF0 704 aa16.06■□□□□ 0.16
PTPN13-204ENST00000436978 FAIM2Q9BWQ8 316 aa16.06■□□□□ 0.16
PTPN13-204ENST00000436978 SLC24A3Q9HC58 644 aa16.06■□□□□ 0.16
PTPN13-204ENST00000436978 DLGAP2Q9P1A6 1054 aa16.06■□□□□ 0.16
PTPN13-204ENST00000436978 MEIS2O14770 477 aa16.06■□□□□ 0.16
PTPN13-204ENST00000436978 TRIM24O15164 1050 aa16.06■□□□□ 0.16
PTPN13-204ENST00000436978 PSMB4P28070 264 aa16.06■□□□□ 0.16
PTPN13-204ENST00000436978 PRKCIP41743 596 aa16.06■□□□□ 0.16
PTPN13-204ENST00000436978 EARS2Q5JPH6 523 aaKnown RBP16.06■□□□□ 0.16
PTPN13-204ENST00000436978 SPPL2AQ8TCT8 520 aa16.06■□□□□ 0.16
PTPN13-204ENST00000436978 TMEM79Q9BSE2 394 aa16.06■□□□□ 0.16
PTPN13-204ENST00000436978 hCG_2014768A0A024R1R8 64 aa16.06■□□□□ 0.16
PTPN13-204ENST00000436978 KIAA0319LQ8IZA0 1049 aa16.06■□□□□ 0.16
PTPN13-204ENST00000436978 SPATA5L1Q9BVQ7 753 aa16.06■□□□□ 0.16
PTPN13-204ENST00000436978 FHDC1Q9C0D6 1143 aaPredicted RBP16.06■□□□□ 0.16
PTPN13-204ENST00000436978 FANCEQ9HB96 536 aa16.06■□□□□ 0.16
PTPN13-204ENST00000436978 ERN1O75460 977 aaKnown RBP16.06■□□□□ 0.16
PTPN13-204ENST00000436978 CCNDBP1O95273 360 aa16.06■□□□□ 0.16
PTPN13-204ENST00000436978 DLGAP3O95886 979 aa16.06■□□□□ 0.16
PTPN13-204ENST00000436978 SYT12Q8IV01 421 aa16.06■□□□□ 0.16
PTPN13-204ENST00000436978 TMEM161BQ8NDZ6 487 aa16.06■□□□□ 0.16
PTPN13-204ENST00000436978 BTBD10Q9BSF8 475 aa16.06■□□□□ 0.16
PTPN13-204ENST00000436978 SLITRK2Q9H156 845 aa16.06■□□□□ 0.16
PTPN13-204ENST00000436978 CYP7B1O75881 506 aa16.06■□□□□ 0.16
PTPN13-204ENST00000436978 ZNF24P17028 368 aa16.06■□□□□ 0.16
PTPN13-204ENST00000436978 HDCP19113 662 aa16.06■□□□□ 0.16
PTPN13-204ENST00000436978 STXBP5Q5T5C0 1151 aa16.06■□□□□ 0.16
PTPN13-204ENST00000436978 TRAF7Q6Q0C0 670 aa16.06■□□□□ 0.16
PTPN13-204ENST00000436978 PIK3R5Q8WYR1 880 aa16.06■□□□□ 0.16
PTPN13-204ENST00000436978 C9orf16Q9BUW7 83 aa16.06■□□□□ 0.16
PTPN13-204ENST00000436978 DNAJC18Q9H819 358 aa16.06■□□□□ 0.16
PTPN13-204ENST00000436978 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.06■□□□□ 0.16
PTPN13-204ENST00000436978 PECAM1P16284 738 aaPredicted RBP16.06■□□□□ 0.16
PTPN13-204ENST00000436978 IRX1P78414 480 aaPredicted RBP16.06■□□□□ 0.16
PTPN13-204ENST00000436978 RAET1GQ6H3X3 334 aa16.06■□□□□ 0.16
PTPN13-204ENST00000436978 PPP1R14AQ96A00 147 aa16.06■□□□□ 0.16
PTPN13-204ENST00000436978 SLC25A23Q9BV35 468 aa16.06■□□□□ 0.16
PTPN13-204ENST00000436978 TRIT1Q9H3H1 467 aaKnown RBP16.06■□□□□ 0.16
PTPN13-204ENST00000436978 KCNK1O00180 336 aa16.06■□□□□ 0.16
PTPN13-204ENST00000436978 NUDT14O95848 222 aa16.06■□□□□ 0.16
PTPN13-204ENST00000436978 INTS11Q5TA45 600 aaKnown RBP16.06■□□□□ 0.16
PTPN13-204ENST00000436978 FOXR2Q6PJQ5 311 aa16.06■□□□□ 0.16
PTPN13-204ENST00000436978 NEK10Q6ZWH5 1172 aa16.06■□□□□ 0.16
PTPN13-204ENST00000436978 POLNQ7Z5Q5 900 aa16.06■□□□□ 0.16
PTPN13-204ENST00000436978 KCNK4Q9NYG8 393 aa16.06■□□□□ 0.16
PTPN13-204ENST00000436978 ASTN1O14525 1302 aa16.05■□□□□ 0.16
PTPN13-204ENST00000436978 OR6C75A6NL08 312 aa16.05■□□□□ 0.16
PTPN13-204ENST00000436978 FAM20BO75063 409 aa16.05■□□□□ 0.16
PTPN13-204ENST00000436978 ATG7O95352 703 aa16.05■□□□□ 0.16
PTPN13-204ENST00000436978 MMP3P08254 477 aa16.05■□□□□ 0.16
PTPN13-204ENST00000436978 H2AFXP16104 143 aaPredicted RBP16.05■□□□□ 0.16
PTPN13-204ENST00000436978 S100A3P33764 101 aa16.05■□□□□ 0.16
PTPN13-204ENST00000436978 EPS8L1Q8TE68 723 aa16.05■□□□□ 0.16
PTPN13-204ENST00000436978 INVSQ9Y283 1065 aa16.05■□□□□ 0.16
PTPN13-204ENST00000436978 TBX2Q13207 712 aaPredicted RBP16.05■□□□□ 0.16
PTPN13-204ENST00000436978 WASHC2DQ5SRD0 308 aa16.05■□□□□ 0.16
PTPN13-204ENST00000436978 PCYOX1Q9UHG3 505 aa16.05■□□□□ 0.16
PTPN13-204ENST00000436978 GPR1P46091 355 aa16.05■□□□□ 0.16
PTPN13-204ENST00000436978 TXNDC11Q6PKC3 985 aa16.05■□□□□ 0.16
PTPN13-204ENST00000436978 ALLCQ8N6M5 410 aa16.05■□□□□ 0.16
PTPN13-204ENST00000436978 ETNPPLQ8TBG4 499 aa16.05■□□□□ 0.16
PTPN13-204ENST00000436978 FAM124BQ9H5Z6 455 aaPredicted RBP16.05■□□□□ 0.16
PTPN13-204ENST00000436978 NINJ2Q9NZG7 142 aa16.05■□□□□ 0.16
PTPN13-204ENST00000436978 COX7A2P14406 83 aa16.05■□□□□ 0.16
PTPN13-204ENST00000436978 ETS1P14921 441 aa16.05■□□□□ 0.16
PTPN13-204ENST00000436978 RPA3P35244 121 aaPredicted RBP16.05■□□□□ 0.16
PTPN13-204ENST00000436978 FEN1P39748 380 aaKnown RBP16.05■□□□□ 0.16
PTPN13-204ENST00000436978 CLK2P49760 499 aaKnown RBP16.05■□□□□ 0.16
PTPN13-204ENST00000436978 CCDC92Q53HC0 331 aaPredicted RBP16.05■□□□□ 0.16
PTPN13-204ENST00000436978 PHF13Q86YI8 300 aaPredicted RBP16.05■□□□□ 0.16
PTPN13-204ENST00000436978 SEMA4AQ9H3S1 761 aa16.05■□□□□ 0.16
PTPN13-204ENST00000436978 TLL1O43897 1013 aa16.05■□□□□ 0.16
PTPN13-204ENST00000436978 RBL1P28749 1068 aa16.05■□□□□ 0.16
PTPN13-204ENST00000436978 RAB14P61106 215 aa16.05■□□□□ 0.16
PTPN13-204ENST00000436978 FUCA2Q9BTY2 467 aa16.05■□□□□ 0.16
PTPN13-204ENST00000436978 DUSP16Q9BY84 665 aa16.05■□□□□ 0.16
PTPN13-204ENST00000436978 HSMCR30P0CW71 290 aa16.05■□□□□ 0.16
PTPN13-204ENST00000436978 VAV1P15498 845 aa16.05■□□□□ 0.16
PTPN13-204ENST00000436978 RGS1Q08116 209 aa16.05■□□□□ 0.16
PTPN13-204ENST00000436978 OLFML2BQ68BL8 750 aa16.05■□□□□ 0.16
PTPN13-204ENST00000436978 ANKRD23Q86SG2 305 aa16.05■□□□□ 0.16
PTPN13-204ENST00000436978 COLGALT2Q8IYK4 626 aa16.05■□□□□ 0.16
PTPN13-204ENST00000436978 MSL3Q8N5Y2 521 aaKnown RBP16.05■□□□□ 0.16
PTPN13-204ENST00000436978 ASB8Q9H765 288 aa16.05■□□□□ 0.16
PTPN13-204ENST00000436978 SAR1AQ9NR31 198 aa16.05■□□□□ 0.16
PTPN13-204ENST00000436978 SOHLH2Q9NX45 425 aa16.05■□□□□ 0.16
PTPN13-204ENST00000436978 BRMS1LQ5PSV4 323 aa16.04■□□□□ 0.16
PTPN13-204ENST00000436978 SERHL2Q9H4I8 314 aa16.04■□□□□ 0.16
PTPN13-204ENST00000436978 PIF1Q9H611 641 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms