RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 KLHDC8BQ8IXV7 354 aa21.48■■□□□ 1.03
PTPRF-207ENST00000436724 OR7D4Q8NG98 312 aa21.48■■□□□ 1.03
PTPRF-207ENST00000436724 ATXN3LQ9H3M9 355 aa21.48■■□□□ 1.03
PTPRF-207ENST00000436724 BFARQ9NZS9 450 aa21.48■■□□□ 1.03
PTPRF-207ENST00000436724 AAR2Q9Y312 384 aaKnown RBP21.48■■□□□ 1.03
PTPRF-207ENST00000436724 CPQQ9Y646 472 aa21.48■■□□□ 1.03
PTPRF-207ENST00000436724 RPS6KL1Q9Y6S9 549 aa21.48■■□□□ 1.03
PTPRF-207ENST00000436724 GOLGA8RI6L899 631 aa21.48■■□□□ 1.03
PTPRF-207ENST00000436724 CCL16O15467 120 aa21.48■■□□□ 1.03
PTPRF-207ENST00000436724 GSTA2P09210 222 aa21.48■■□□□ 1.03
PTPRF-207ENST00000436724 KRT4P19013 534 aa21.48■■□□□ 1.03
PTPRF-207ENST00000436724 RENBPP51606 427 aa21.48■■□□□ 1.03
PTPRF-207ENST00000436724 ITKQ08881 620 aa21.48■■□□□ 1.03
PTPRF-207ENST00000436724 RABGAP1LQ5R372 815 aa21.48■■□□□ 1.03
PTPRF-207ENST00000436724 NAPEPLDQ6IQ20 393 aa21.48■■□□□ 1.03
PTPRF-207ENST00000436724 SLC26A11Q86WA9 606 aa21.48■■□□□ 1.03
PTPRF-207ENST00000436724 PHOSPHO2Q8TCD6 241 aa21.48■■□□□ 1.03
PTPRF-207ENST00000436724 MICAL1Q8TDZ2 1067 aa21.48■■□□□ 1.03
PTPRF-207ENST00000436724 FCRL3Q96P31 734 aaPredicted RBP21.48■■□□□ 1.03
PTPRF-207ENST00000436724 SAMD15Q9P1V8 674 aa21.48■■□□□ 1.03
PTPRF-207ENST00000436724 ASB3Q9Y575 518 aa21.48■■□□□ 1.03
PTPRF-207ENST00000436724 IRAK3Q9Y616 596 aa21.48■■□□□ 1.03
PTPRF-207ENST00000436724 CAPN7Q9Y6W3 813 aa21.48■■□□□ 1.03
PTPRF-207ENST00000436724 A0A1W2PRU2 124 aa21.47■■□□□ 1.03
PTPRF-207ENST00000436724 FAM159BA6NKW6 160 aa21.47■■□□□ 1.03
PTPRF-207ENST00000436724 GLUD1P00367 558 aa21.47■■□□□ 1.03
PTPRF-207ENST00000436724 IRS1P35568 1242 aa21.47■■□□□ 1.03
PTPRF-207ENST00000436724 YBEYP58557 167 aaPredicted RBP21.47■■□□□ 1.03
PTPRF-207ENST00000436724 FAM109BQ6ICB4 259 aaPredicted RBP21.47■■□□□ 1.03
PTPRF-207ENST00000436724 AZIN2Q96A70 460 aa21.47■■□□□ 1.03
PTPRF-207ENST00000436724 CHMP6Q96FZ7 201 aa21.47■■□□□ 1.03
PTPRF-207ENST00000436724 ZNF317Q96PQ6 595 aaPredicted RBP21.47■■□□□ 1.03
PTPRF-207ENST00000436724 CORO1BQ9BR76 489 aa21.47■■□□□ 1.03
PTPRF-207ENST00000436724 FICDQ9BVA6 458 aa21.47■■□□□ 1.03
PTPRF-207ENST00000436724 EMILIN2Q9BXX0 1053 aa21.47■■□□□ 1.03
PTPRF-207ENST00000436724 HCFC1R1Q9NWW0 138 aa21.47■■□□□ 1.03
PTPRF-207ENST00000436724 GJB3O75712 270 aa21.47■■□□□ 1.03
PTPRF-207ENST00000436724 ANXA9O76027 345 aa21.47■■□□□ 1.03
PTPRF-207ENST00000436724 OLFM2O95897 454 aa21.47■■□□□ 1.03
PTPRF-207ENST00000436724 CDH4P55283 916 aa21.47■■□□□ 1.03
PTPRF-207ENST00000436724 IHHQ14623 411 aa21.47■■□□□ 1.03
PTPRF-207ENST00000436724 PCSK7Q16549 785 aa21.47■■□□□ 1.03
PTPRF-207ENST00000436724 FBXW10Q5XX13 1052 aa21.47■■□□□ 1.03
PTPRF-207ENST00000436724 CCDC149Q6ZUS6 474 aa21.47■■□□□ 1.03
PTPRF-207ENST00000436724 PGBD5Q8N414 524 aa21.47■■□□□ 1.03
PTPRF-207ENST00000436724 SMC6Q96SB8 1091 aa21.47■■□□□ 1.03
PTPRF-207ENST00000436724 TBL1YQ9BQ87 522 aa21.47■■□□□ 1.03
PTPRF-207ENST00000436724 TLR9Q9NR96 1032 aa21.47■■□□□ 1.03
PTPRF-207ENST00000436724 CHRAC1Q9NRG0 131 aa21.47■■□□□ 1.03
PTPRF-207ENST00000436724 CCDC78A2IDD5 438 aa21.46■■□□□ 1.03
PTPRF-207ENST00000436724 GREM1O60565 184 aa21.46■■□□□ 1.03
PTPRF-207ENST00000436724 RFPL2O75678 378 aa21.46■■□□□ 1.03
PTPRF-207ENST00000436724 ALDH1A2O94788 518 aa21.46■■□□□ 1.03
PTPRF-207ENST00000436724 GLDCP23378 1020 aa21.46■■□□□ 1.03
PTPRF-207ENST00000436724 GNA12Q03113 381 aa21.46■■□□□ 1.03
PTPRF-207ENST00000436724 IL10RBQ08334 325 aa21.46■■□□□ 1.03
PTPRF-207ENST00000436724 NIPAL4Q0D2K0 466 aa21.46■■□□□ 1.03
PTPRF-207ENST00000436724 CDH17Q12864 832 aa21.46■■□□□ 1.03
PTPRF-207ENST00000436724 CAMK1Q14012 370 aa21.46■■□□□ 1.03
PTPRF-207ENST00000436724 CPLX4Q7Z7G2 160 aa21.46■■□□□ 1.03
PTPRF-207ENST00000436724 MFSD3Q96ES6 412 aa21.46■■□□□ 1.03
PTPRF-207ENST00000436724 CHD5Q8TDI0 1954 aa21.46■■□□□ 1.03
PTPRF-207ENST00000436724 CKMP06732 381 aa21.46■■□□□ 1.03
PTPRF-207ENST00000436724 POLBP06746 335 aa21.46■■□□□ 1.03
PTPRF-207ENST00000436724 MYL4P12829 197 aa21.46■■□□□ 1.03
PTPRF-207ENST00000436724 HOXD9P28356 352 aaPredicted RBP21.46■■□□□ 1.03
PTPRF-207ENST00000436724 CLCN4P51793 760 aa21.46■■□□□ 1.03
PTPRF-207ENST00000436724 DSC2Q02487 901 aa21.46■■□□□ 1.03
PTPRF-207ENST00000436724 CCNJLQ8IV13 435 aa21.46■■□□□ 1.03
PTPRF-207ENST00000436724 GDAP1Q8TB36 358 aa21.46■■□□□ 1.03
PTPRF-207ENST00000436724 MRPS31Q92665 395 aaKnown RBP21.46■■□□□ 1.03
PTPRF-207ENST00000436724 BHMTQ93088 406 aa21.46■■□□□ 1.03
PTPRF-207ENST00000436724 ZNF669Q96BR6 464 aaPredicted RBP21.46■■□□□ 1.03
PTPRF-207ENST00000436724 MRGPRX2Q96LB1 330 aa21.46■■□□□ 1.03
PTPRF-207ENST00000436724 ZNF778Q96MU6 729 aa21.46■■□□□ 1.03
PTPRF-207ENST00000436724 NAT9Q9BTE0 207 aa21.46■■□□□ 1.03
PTPRF-207ENST00000436724 LZTS1Q9Y250 596 aa21.46■■□□□ 1.03
PTPRF-207ENST00000436724 DENND4CQ5VZ89 1909 aa21.45■■□□□ 1.02
PTPRF-207ENST00000436724 GRM6O15303 877 aa21.45■■□□□ 1.02
PTPRF-207ENST00000436724 PRAMEF11O60813 436 aa21.45■■□□□ 1.02
PTPRF-207ENST00000436724 ERVK-10P10266 1014 aa21.45■■□□□ 1.02
PTPRF-207ENST00000436724 CHRNA4P43681 627 aa21.45■■□□□ 1.02
PTPRF-207ENST00000436724 GEMP55040 296 aa21.45■■□□□ 1.02
PTPRF-207ENST00000436724 BMPR2Q13873 1038 aa21.45■■□□□ 1.02
PTPRF-207ENST00000436724 C9orf50Q5SZB4 431 aa21.45■■□□□ 1.02
PTPRF-207ENST00000436724 IL31Q6EBC2 164 aa21.45■■□□□ 1.02
PTPRF-207ENST00000436724 DENND5AQ6IQ26 1287 aa21.45■■□□□ 1.02
PTPRF-207ENST00000436724 LINC00523Q86TU6 105 aa21.45■■□□□ 1.02
PTPRF-207ENST00000436724 TAX1BP1Q86VP1 789 aa21.45■■□□□ 1.02
PTPRF-207ENST00000436724 TEX26Q8N6G2 289 aa21.45■■□□□ 1.02
PTPRF-207ENST00000436724 FATE1Q969F0 183 aa21.45■■□□□ 1.02
PTPRF-207ENST00000436724 SERAC1Q96JX3 654 aa21.45■■□□□ 1.02
PTPRF-207ENST00000436724 CABS1Q96KC9 395 aa21.45■■□□□ 1.02
PTPRF-207ENST00000436724 SPON2Q9BUD6 331 aa21.45■■□□□ 1.02
PTPRF-207ENST00000436724 FSD1LQ9BXM9 530 aa21.45■■□□□ 1.02
PTPRF-207ENST00000436724 SLC25A51Q9H1U9 297 aa21.45■■□□□ 1.02
PTPRF-207ENST00000436724 SENP1Q9P0U3 644 aa21.45■■□□□ 1.02
PTPRF-207ENST00000436724 CEP290O15078 2479 aa21.44■■□□□ 1.02
PTPRF-207ENST00000436724 IQANK1A0A1B0GTG1 560 aa21.44■■□□□ 1.02
PTPRF-207ENST00000436724 FAM47DPA6NHR8 397 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms