RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 RBL1P28749 1068 aa7.2□□□□□ -1.26
LSM3P3-201ENST00000436601 CHKAP35790 457 aa7.2□□□□□ -1.26
LSM3P3-201ENST00000436601 ATP5OP48047 213 aa7.2□□□□□ -1.26
LSM3P3-201ENST00000436601 MAPKAPK2P49137 400 aa7.2□□□□□ -1.26
LSM3P3-201ENST00000436601 NDST2P52849 883 aa7.2□□□□□ -1.26
LSM3P3-201ENST00000436601 NRLP54845 237 aa7.2□□□□□ -1.26
LSM3P3-201ENST00000436601 CDH4P55283 916 aa7.2□□□□□ -1.26
LSM3P3-201ENST00000436601 TUBB4BP68371 445 aa7.2□□□□□ -1.26
LSM3P3-201ENST00000436601 SLC7A5Q01650 507 aa7.2□□□□□ -1.26
LSM3P3-201ENST00000436601 DR1Q01658 176 aa7.2□□□□□ -1.26
LSM3P3-201ENST00000436601 SPEM2Q0P670 501 aa7.2□□□□□ -1.26
LSM3P3-201ENST00000436601 DHX34Q14147 1143 aaKnown RBP7.2□□□□□ -1.26
LSM3P3-201ENST00000436601 PRKD1Q15139 912 aaPredicted RBP7.2□□□□□ -1.26
LSM3P3-201ENST00000436601 GLE1Q53GS7 698 aaKnown RBP7.2□□□□□ -1.26
LSM3P3-201ENST00000436601 SLC45A4Q5BKX6 768 aa7.2□□□□□ -1.26
LSM3P3-201ENST00000436601 HABP4Q5JVS0 413 aaKnown RBP7.2□□□□□ -1.26
LSM3P3-201ENST00000436601 RABGAP1LQ5R372 815 aa7.2□□□□□ -1.26
LSM3P3-201ENST00000436601 FAM182AQ5T1J6 154 aa7.2□□□□□ -1.26
LSM3P3-201ENST00000436601 RNF43Q68DV7 783 aa7.2□□□□□ -1.26
LSM3P3-201ENST00000436601 TANGO2Q6ICL3 276 aa7.2□□□□□ -1.26
LSM3P3-201ENST00000436601 C8orf74Q6P047 294 aa7.2□□□□□ -1.26
LSM3P3-201ENST00000436601 DARS2Q6PI48 645 aaKnown RBP7.2□□□□□ -1.26
LSM3P3-201ENST00000436601 BZW1Q7L1Q6 419 aaKnown RBP7.2□□□□□ -1.26
LSM3P3-201ENST00000436601 CHST9Q7L1S5 443 aa7.2□□□□□ -1.26
LSM3P3-201ENST00000436601 TMEM25Q86YD3 366 aa7.2□□□□□ -1.26
LSM3P3-201ENST00000436601 JAMLQ86YT9 394 aa7.2□□□□□ -1.26
LSM3P3-201ENST00000436601 CCDC105Q8IYK2 499 aa7.2□□□□□ -1.26
LSM3P3-201ENST00000436601 ADGRG2Q8IZP9 1017 aa7.2□□□□□ -1.26
LSM3P3-201ENST00000436601 LZTR1Q8N653 840 aa7.2□□□□□ -1.26
LSM3P3-201ENST00000436601 ALLCQ8N6M5 410 aa7.2□□□□□ -1.26
LSM3P3-201ENST00000436601 KIAA1958Q8N8K9 716 aa7.2□□□□□ -1.26
LSM3P3-201ENST00000436601 TDRD5Q8NAT2 981 aaKnown RBP7.2□□□□□ -1.26
LSM3P3-201ENST00000436601 GLIS1Q8NBF1 620 aa7.2□□□□□ -1.26
LSM3P3-201ENST00000436601 CCDC26Q8TAB7 109 aa7.2□□□□□ -1.26
LSM3P3-201ENST00000436601 TMA16Q96EY4 203 aaKnown RBP7.2□□□□□ -1.26
LSM3P3-201ENST00000436601 RUNDC3BQ96NL0 473 aa7.2□□□□□ -1.26
LSM3P3-201ENST00000436601 CNTNAP3BQ96NU0 1288 aa7.2□□□□□ -1.26
LSM3P3-201ENST00000436601 QKIQ96PU8 341 aaKnown RBP eCLIP7.2□□□□□ -1.26
LSM3P3-201ENST00000436601 LGMNQ99538 433 aa7.2□□□□□ -1.26
LSM3P3-201ENST00000436601 RHOXF2Q9BQY4 288 aa7.2□□□□□ -1.26
LSM3P3-201ENST00000436601 TMEM121Q9BTD3 319 aa7.2□□□□□ -1.26
LSM3P3-201ENST00000436601 CNTNAP3Q9BZ76 1288 aa7.2□□□□□ -1.26
LSM3P3-201ENST00000436601 PLA2G2FQ9BZM2 168 aa7.2□□□□□ -1.26
LSM3P3-201ENST00000436601 BHLHE41Q9C0J9 482 aaPredicted RBP7.2□□□□□ -1.26
LSM3P3-201ENST00000436601 RETREG1Q9H6L5 497 aa7.2□□□□□ -1.26
LSM3P3-201ENST00000436601 ANKZF1Q9H8Y5 726 aa7.2□□□□□ -1.26
LSM3P3-201ENST00000436601 KIF9Q9HAQ2 790 aa7.2□□□□□ -1.26
LSM3P3-201ENST00000436601 TBC1D14Q9P2M4 693 aa7.2□□□□□ -1.26
LSM3P3-201ENST00000436601 CD207Q9UJ71 328 aa7.2□□□□□ -1.26
LSM3P3-201ENST00000436601 ZNF148Q9UQR1 794 aa7.2□□□□□ -1.26
LSM3P3-201ENST00000436601 TBC1D30Q9Y2I9 924 aa7.2□□□□□ -1.26
LSM3P3-201ENST00000436601 USP15Q9Y4E8 981 aaPredicted RBP7.2□□□□□ -1.26
LSM3P3-201ENST00000436601 RAD54BQ9Y620 910 aa7.2□□□□□ -1.26
LSM3P3-201ENST00000436601 WNT6Q9Y6F9 365 aa7.2□□□□□ -1.26
LSM3P3-201ENST00000436601 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.19□□□□□ -1.26
LSM3P3-201ENST00000436601 A0A1B0GVM2 712 aa7.19□□□□□ -1.26
LSM3P3-201ENST00000436601 SLC35F4A4IF30 521 aa7.19□□□□□ -1.26
LSM3P3-201ENST00000436601 TCAF2A6NFQ2 919 aa7.19□□□□□ -1.26
LSM3P3-201ENST00000436601 ZSCAN5CA6NGD5 496 aaPredicted RBP7.19□□□□□ -1.26
LSM3P3-201ENST00000436601 HEPACAM2A8MVW5 462 aa7.19□□□□□ -1.26
LSM3P3-201ENST00000436601 HACD1B0YJ81 288 aa7.19□□□□□ -1.26
LSM3P3-201ENST00000436601 RASA4BC9J798 803 aa7.19□□□□□ -1.26
LSM3P3-201ENST00000436601 DFFAO00273 331 aa7.19□□□□□ -1.26
LSM3P3-201ENST00000436601 MCF2LO15068 1137 aa7.19□□□□□ -1.26
LSM3P3-201ENST00000436601 NCAM2O15394 837 aa7.19□□□□□ -1.26
LSM3P3-201ENST00000436601 RASA4O43374 803 aa7.19□□□□□ -1.26
LSM3P3-201ENST00000436601 MAFKO60675 156 aa7.19□□□□□ -1.26
LSM3P3-201ENST00000436601 TBL1XO60907 577 aa7.19□□□□□ -1.26
LSM3P3-201ENST00000436601 CLDN11O75508 207 aa7.19□□□□□ -1.26
LSM3P3-201ENST00000436601 ECEL1O95672 775 aa7.19□□□□□ -1.26
LSM3P3-201ENST00000436601 PENKP01210 267 aaPredicted RBP7.19□□□□□ -1.26
LSM3P3-201ENST00000436601 ETS1P14921 441 aa7.19□□□□□ -1.26
LSM3P3-201ENST00000436601 FOSL2P15408 326 aa7.19□□□□□ -1.26
LSM3P3-201ENST00000436601 VAV1P15498 845 aa7.19□□□□□ -1.26
LSM3P3-201ENST00000436601 MX2P20592 715 aa7.19□□□□□ -1.26
LSM3P3-201ENST00000436601 HOXD9P28356 352 aaPredicted RBP7.19□□□□□ -1.26
LSM3P3-201ENST00000436601 OR1E1P30953 314 aa7.19□□□□□ -1.26
LSM3P3-201ENST00000436601 STIP1P31948 543 aaKnown RBP7.19□□□□□ -1.26
LSM3P3-201ENST00000436601 SERPINB6P35237 376 aa7.19□□□□□ -1.26
LSM3P3-201ENST00000436601 ACVRL1P37023 503 aa7.19□□□□□ -1.26
LSM3P3-201ENST00000436601 GARSP41250 739 aaKnown RBP7.19□□□□□ -1.26
LSM3P3-201ENST00000436601 PAPOLAP51003 745 aaKnown RBP7.19□□□□□ -1.26
LSM3P3-201ENST00000436601 LMNB2Q03252 620 aa7.19□□□□□ -1.26
LSM3P3-201ENST00000436601 PPIDQ08752 370 aaKnown RBP7.19□□□□□ -1.26
LSM3P3-201ENST00000436601 ZNF177Q13360 481 aaPredicted RBP7.19□□□□□ -1.26
LSM3P3-201ENST00000436601 PDK1Q15118 436 aa7.19□□□□□ -1.26
LSM3P3-201ENST00000436601 TRADDQ15628 312 aa7.19□□□□□ -1.26
LSM3P3-201ENST00000436601 MPPE1Q53F39 396 aa7.19□□□□□ -1.26
LSM3P3-201ENST00000436601 FSCBQ5H9T9 825 aa7.19□□□□□ -1.26
LSM3P3-201ENST00000436601 RPS26P11Q5JNZ5 115 aaPredicted RBP7.19□□□□□ -1.26
LSM3P3-201ENST00000436601 MPP7Q5T2T1 576 aa7.19□□□□□ -1.26
LSM3P3-201ENST00000436601 FYB2Q5VWT5 728 aa7.19□□□□□ -1.26
LSM3P3-201ENST00000436601 CXorf57Q6NSI4 855 aaKnown RBP7.19□□□□□ -1.26
LSM3P3-201ENST00000436601 RHBDF2Q6PJF5 856 aa7.19□□□□□ -1.26
LSM3P3-201ENST00000436601 PARM1Q6UWI2 310 aa7.19□□□□□ -1.26
LSM3P3-201ENST00000436601 VITQ6UXI7 678 aa7.19□□□□□ -1.26
LSM3P3-201ENST00000436601 ARHGAP36Q6ZRI8 547 aa7.19□□□□□ -1.26
LSM3P3-201ENST00000436601 TPGS1Q6ZTW0 290 aa7.19□□□□□ -1.26
LSM3P3-201ENST00000436601 SYDE1Q6ZW31 735 aaPredicted RBP7.19□□□□□ -1.26
LSM3P3-201ENST00000436601 MAATS1Q7Z4T9 603 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms