RNA–Protein interactions for RNA: ENST00000434735.6

UBE3B-203, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-203ENST00000434735 C4orf33Q8N1A6 199 aa12.31□□□□□ -0.44
UBE3B-203ENST00000434735 HTR3CQ8WXA8 447 aa12.31□□□□□ -0.44
UBE3B-203ENST00000434735 REPS1Q96D71 796 aa12.31□□□□□ -0.44
UBE3B-203ENST00000434735 MTFMTQ96DP5 389 aaKnown RBP12.31□□□□□ -0.44
UBE3B-203ENST00000434735 TSPAN18Q96SJ8 248 aa12.31□□□□□ -0.44
UBE3B-203ENST00000434735 STRADBQ9C0K7 418 aa12.31□□□□□ -0.44
UBE3B-203ENST00000434735 PAPOLBQ9NRJ5 636 aaKnown RBP12.31□□□□□ -0.44
UBE3B-203ENST00000434735 TAS2R13Q9NYV9 303 aa12.31□□□□□ -0.44
UBE3B-203ENST00000434735 USE1Q9NZ43 259 aa12.31□□□□□ -0.44
UBE3B-203ENST00000434735 RGS17Q9UGC6 210 aaPredicted RBP12.31□□□□□ -0.44
UBE3B-203ENST00000434735 ZMYM5Q9UJ78 669 aa12.31□□□□□ -0.44
UBE3B-203ENST00000434735 RNF103O00237 685 aa12.31□□□□□ -0.44
UBE3B-203ENST00000434735 SLC11A1P49279 550 aa12.31□□□□□ -0.44
UBE3B-203ENST00000434735 DLG4P78352 724 aa12.31□□□□□ -0.44
UBE3B-203ENST00000434735 CNGA2Q16280 664 aa12.31□□□□□ -0.44
UBE3B-203ENST00000434735 ATP13A4Q4VNC1 1196 aa12.31□□□□□ -0.44
UBE3B-203ENST00000434735 FAM84AQ96KN4 292 aa12.31□□□□□ -0.44
UBE3B-203ENST00000434735 TBCBQ99426 244 aa12.31□□□□□ -0.44
UBE3B-203ENST00000434735 SMG9Q9H0W8 520 aaKnown RBP12.31□□□□□ -0.44
UBE3B-203ENST00000434735 KCNMB3Q9NPA1 279 aa12.31□□□□□ -0.44
UBE3B-203ENST00000434735 ZNF112Q9UJU3 913 aa12.31□□□□□ -0.44
UBE3B-203ENST00000434735 PAGE1O75459 146 aa12.31□□□□□ -0.44
UBE3B-203ENST00000434735 SEC24DO94855 1032 aaPredicted RBP12.31□□□□□ -0.44
UBE3B-203ENST00000434735 CDK14O94921 469 aa12.31□□□□□ -0.44
UBE3B-203ENST00000434735 LSP1P33241 339 aa12.31□□□□□ -0.44
UBE3B-203ENST00000434735 MRPS5P82675 430 aaKnown RBP12.31□□□□□ -0.44
UBE3B-203ENST00000434735 CSTF1Q05048 431 aaKnown RBP12.31□□□□□ -0.44
UBE3B-203ENST00000434735 STX3Q13277 289 aa12.31□□□□□ -0.44
UBE3B-203ENST00000434735 PAGE2BQ5JRK9 111 aa12.31□□□□□ -0.44
UBE3B-203ENST00000434735 ZNF470Q6ECI4 717 aa12.31□□□□□ -0.44
UBE3B-203ENST00000434735 ZNF852Q6ZMS4 543 aa12.31□□□□□ -0.44
UBE3B-203ENST00000434735 KCNK18Q7Z418 384 aa12.31□□□□□ -0.44
UBE3B-203ENST00000434735 FAM46DQ8NEK8 389 aa12.31□□□□□ -0.44
UBE3B-203ENST00000434735 MYCBPAPQ8TBZ2 947 aa12.31□□□□□ -0.44
UBE3B-203ENST00000434735 MYO19Q96H55 970 aa12.31□□□□□ -0.44
UBE3B-203ENST00000434735 ZNF333Q96JL9 665 aa12.31□□□□□ -0.44
UBE3B-203ENST00000434735 KLHL5Q96PQ7 755 aa12.31□□□□□ -0.44
UBE3B-203ENST00000434735 THUMPD3Q9BV44 507 aaKnown RBP12.31□□□□□ -0.44
UBE3B-203ENST00000434735 LHX5Q9H2C1 402 aa12.31□□□□□ -0.44
UBE3B-203ENST00000434735 ZNF576Q9H609 170 aa12.31□□□□□ -0.44
UBE3B-203ENST00000434735 ZFP37Q9Y6Q3 630 aaPredicted RBP12.31□□□□□ -0.44
UBE3B-203ENST00000434735 V9GYQ6 96 aa12.31□□□□□ -0.44
UBE3B-203ENST00000434735 BAZ2BQ9UIF8 2168 aaKnown RBP12.3□□□□□ -0.44
UBE3B-203ENST00000434735 KLF8O95600 359 aaPredicted RBP12.3□□□□□ -0.44
UBE3B-203ENST00000434735 CCDC142Q17RM4 750 aa12.3□□□□□ -0.44
UBE3B-203ENST00000434735 TTC29Q8NA56 475 aaPredicted RBP12.3□□□□□ -0.44
UBE3B-203ENST00000434735 BTN2A3PQ96KV6 586 aa12.3□□□□□ -0.44
UBE3B-203ENST00000434735 TMEM175Q9BSA9 504 aa12.3□□□□□ -0.44
UBE3B-203ENST00000434735 TRABDQ9H4I3 376 aa12.3□□□□□ -0.44
UBE3B-203ENST00000434735 PTPRHQ9HD43 1115 aa12.3□□□□□ -0.44
UBE3B-203ENST00000434735 EXOSC4Q9NPD3 245 aaKnown RBP12.3□□□□□ -0.44
UBE3B-203ENST00000434735 FBXL12Q9NXK8 326 aa12.3□□□□□ -0.44
UBE3B-203ENST00000434735 ADRB2P07550 413 aa12.3□□□□□ -0.44
UBE3B-203ENST00000434735 SERPINH1P50454 418 aaKnown RBP12.3□□□□□ -0.44
UBE3B-203ENST00000434735 NME5P56597 212 aa12.3□□□□□ -0.44
UBE3B-203ENST00000434735 C1QBPQ07021 282 aaKnown RBP12.3□□□□□ -0.44
UBE3B-203ENST00000434735 MTF1Q14872 753 aa12.3□□□□□ -0.44
UBE3B-203ENST00000434735 MFSD5Q6N075 450 aa12.3□□□□□ -0.44
UBE3B-203ENST00000434735 KBTBD4Q9NVX7 518 aa12.3□□□□□ -0.44
UBE3B-203ENST00000434735 F8VZ95 297 aa12.3□□□□□ -0.44
UBE3B-203ENST00000434735 BTN3A1O00481 513 aa12.3□□□□□ -0.44
UBE3B-203ENST00000434735 PEX12O00623 359 aa12.3□□□□□ -0.44
UBE3B-203ENST00000434735 AKAP10O43572 662 aa12.3□□□□□ -0.44
UBE3B-203ENST00000434735 GUCY1B2O75343 617 aa12.3□□□□□ -0.44
UBE3B-203ENST00000434735 DAB1O75553 588 aa12.3□□□□□ -0.44
UBE3B-203ENST00000434735 SNRPAP09012 282 aaKnown RBP12.3□□□□□ -0.44
UBE3B-203ENST00000434735 GSTM1P09488 218 aa12.3□□□□□ -0.44
UBE3B-203ENST00000434735 ICAM3P32942 547 aa12.3□□□□□ -0.44
UBE3B-203ENST00000434735 S100A5P33763 92 aa12.3□□□□□ -0.44
UBE3B-203ENST00000434735 CLCN6P51797 869 aa12.3□□□□□ -0.44
UBE3B-203ENST00000434735 VAC14Q08AM6 782 aa12.3□□□□□ -0.44
UBE3B-203ENST00000434735 TBL3Q12788 808 aaKnown RBP12.3□□□□□ -0.44
UBE3B-203ENST00000434735 ZNF544Q6NX49 715 aa12.3□□□□□ -0.44
UBE3B-203ENST00000434735 CD101Q93033 1021 aa12.3□□□□□ -0.44
UBE3B-203ENST00000434735 BPIFA3Q9BQP9 254 aa12.3□□□□□ -0.44
UBE3B-203ENST00000434735 CNGB3Q9NQW8 809 aa12.3□□□□□ -0.44
UBE3B-203ENST00000434735 MRPS33Q9Y291 106 aaKnown RBP12.3□□□□□ -0.44
UBE3B-203ENST00000434735 DERAQ9Y315 318 aa12.3□□□□□ -0.44
UBE3B-203ENST00000434735 GMFGO60234 142 aa12.3□□□□□ -0.44
UBE3B-203ENST00000434735 MIPP30301 263 aa12.3□□□□□ -0.44
UBE3B-203ENST00000434735 GNPDA1P46926 289 aa12.3□□□□□ -0.44
UBE3B-203ENST00000434735 GCNT1Q02742 428 aa12.3□□□□□ -0.44
UBE3B-203ENST00000434735 LRRC73Q5JTD7 316 aa12.3□□□□□ -0.44
UBE3B-203ENST00000434735 WDR59Q6PJI9 974 aa12.3□□□□□ -0.44
UBE3B-203ENST00000434735 CES3Q6UWW8 571 aa12.3□□□□□ -0.44
UBE3B-203ENST00000434735 NLRP9Q7RTR0 991 aa12.3□□□□□ -0.44
UBE3B-203ENST00000434735 PLD3Q8IV08 490 aa12.3□□□□□ -0.44
UBE3B-203ENST00000434735 RAVER1Q8IY67 606 aaKnown RBP12.3□□□□□ -0.44
UBE3B-203ENST00000434735 CYB5D2Q8WUJ1 264 aa12.3□□□□□ -0.44
UBE3B-203ENST00000434735 NDRG1Q92597 394 aaKnown RBP12.3□□□□□ -0.44
UBE3B-203ENST00000434735 AP2M1Q96CW1 435 aa12.3□□□□□ -0.44
UBE3B-203ENST00000434735 CATSPERZQ9NTU4 200 aa12.3□□□□□ -0.44
UBE3B-203ENST00000434735 TDP1Q9NUW8 608 aa12.3□□□□□ -0.44
UBE3B-203ENST00000434735 DNAJC11Q9NVH1 559 aa12.3□□□□□ -0.44
UBE3B-203ENST00000434735 MORF4L1Q9UBU8 362 aa12.3□□□□□ -0.44
UBE3B-203ENST00000434735 PSME2Q9UL46 239 aa12.3□□□□□ -0.44
UBE3B-203ENST00000434735 PSMD13Q9UNM6 376 aa12.3□□□□□ -0.44
UBE3B-203ENST00000434735 CDYLQ9Y232 598 aa12.3□□□□□ -0.44
UBE3B-203ENST00000434735 COLEC10Q9Y6Z7 277 aa12.3□□□□□ -0.44
UBE3B-203ENST00000434735 KRT6AP02538 564 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms