RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 PECAM1P16284 738 aaPredicted RBP3.82□□□□□ -1.8
SHPRH-205ENST00000433355 CARSP49589 748 aaKnown RBP3.82□□□□□ -1.8
SHPRH-205ENST00000433355 LIG3P49916 1009 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 KCNJ11Q14654 390 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 EIF4HQ15056 248 aaKnown RBP3.82□□□□□ -1.8
SHPRH-205ENST00000433355 MMEL1Q495T6 779 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 PAGE2BQ5JRK9 111 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 TDRD10Q5VZ19 366 aaKnown RBP3.82□□□□□ -1.8
SHPRH-205ENST00000433355 KCTD16Q68DU8 428 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 OGFOD2Q6N063 350 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 CCDC60Q8IWA6 550 aaPredicted RBP3.82□□□□□ -1.8
SHPRH-205ENST00000433355 ARMC2Q8NEN0 867 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 ZFAND2BQ8WV99 257 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 DDX17Q92841 729 aaKnown RBP3.82□□□□□ -1.8
SHPRH-205ENST00000433355 FEM1CQ96JP0 617 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 TMEM175Q9BSA9 504 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 ARMC7Q9H6L4 198 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 UBP1Q9NZI7 540 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 ILVBLA1L0T0 632 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 PRR23AA6NEV1 266 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 MPP1Q00013 466 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 SLC34A1Q06495 639 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 ART3Q13508 389 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 EFTUD2Q15029 972 aaKnown RBP eCLIP3.82□□□□□ -1.8
SHPRH-205ENST00000433355 LIPMQ5VYY2 423 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 TLK2Q86UE8 772 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 FAM174AQ8TBP5 190 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 MAML1Q92585 1016 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 ASB9Q96DX5 294 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 PPP3R2Q96LZ3 170 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 PLIN2Q99541 437 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 GPR20Q99678 358 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 SPATA5L1Q9BVQ7 753 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 CFHR5Q9BXR6 569 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 GBA3Q9H227 469 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 LRFN2Q9ULH4 789 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 L3MBTL1Q9Y468 752 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 HEATR5BQ9P2D3 2071 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 SPDYE4A6NLX3 237 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 TRUB2O95900 331 aaKnown RBP3.82□□□□□ -1.8
SHPRH-205ENST00000433355 ZNF7P17097 686 aaPredicted RBP3.82□□□□□ -1.8
SHPRH-205ENST00000433355 KLRK1P26718 216 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 JADE1Q6IE81 842 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 FBXO36Q8NEA4 188 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 CERS2Q96G23 380 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 RNF157Q96PX1 679 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 NFKBIL1Q9UBC1 381 aaPredicted RBP3.82□□□□□ -1.8
SHPRH-205ENST00000433355 PKP3Q9Y446 797 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 AP2A2O94973 939 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 MRPS9P82933 396 aaKnown RBP3.82□□□□□ -1.8
SHPRH-205ENST00000433355 BNIP1Q12981 228 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 TOP3AQ13472 1001 aaPredicted RBP3.82□□□□□ -1.8
SHPRH-205ENST00000433355 ARHGAP15Q53QZ3 475 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 TTC27Q6P3X3 843 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 GADL1Q6ZQY3 521 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 TTLQ8NG68 377 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 KCNJ9Q92806 393 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 ZNF317Q96PQ6 595 aaPredicted RBP3.82□□□□□ -1.8
SHPRH-205ENST00000433355 SYT15Q9BQS2 421 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 NOD2Q9HC29 1040 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 GRHL1Q9NZI5 618 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 DNAJC16Q9Y2G8 782 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 IPPQ9Y573 584 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 PCM1Q15154 2024 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 RPS3P23396 243 aaKnown RBP eCLIP3.82□□□□□ -1.8
SHPRH-205ENST00000433355 PTK2BQ14289 1009 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 GEN1Q17RS7 908 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 RASSF3Q86WH2 238 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 MIER2Q8N344 545 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 OR56A4Q8NGH8 313 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 ATP13A1Q9HD20 1204 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 USE1Q9NZ43 259 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 CCL15-CCL14A0A0B4J2E2 113 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 PDE2AO00408 941 aaPredicted RBP3.82□□□□□ -1.8
SHPRH-205ENST00000433355 E2F3O00716 465 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 UBDO15205 165 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 LRCH4O75427 683 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 HIST1H2AGP0C0S8 130 aaPredicted RBP3.82□□□□□ -1.8
SHPRH-205ENST00000433355 NR2C1P13056 603 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 INSRRP14616 1297 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 HIST1H2ADP20671 130 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 MAP2K5Q13163 448 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 POLD3Q15054 466 aaPredicted RBP3.82□□□□□ -1.8
SHPRH-205ENST00000433355 TEAD4Q15561 434 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 TAF1CQ15572 869 aaPredicted RBP3.82□□□□□ -1.8
SHPRH-205ENST00000433355 CCL15Q16663 113 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 ZC3H7AQ8IWR0 971 aaKnown RBP3.82□□□□□ -1.8
SHPRH-205ENST00000433355 SCUBE1Q8IWY4 988 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 GALNT6Q8NCL4 622 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 ZNF764Q96H86 408 aaPredicted RBP3.82□□□□□ -1.8
SHPRH-205ENST00000433355 HIST1H2AHQ96KK5 128 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 HIST1H2AJQ99878 128 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 H2AFJQ9BTM1 129 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 PRDM9Q9NQV7 894 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 CDKN2AIPQ9NXV6 580 aaPredicted RBP3.82□□□□□ -1.8
SHPRH-205ENST00000433355 BCS1LQ9Y276 419 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 A3GALT2U3KPV4 340 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 STX16-NPEPL1H3BU86 382 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 RNF103O00237 685 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 STX16O14662 325 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms