RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 A0A0A0MQY5 61 aa3.62□□□□□ -1.83
CLK1-204ENST00000432425 KIF1CO43896 1103 aaKnown RBP3.62□□□□□ -1.83
CLK1-204ENST00000432425 PAPSS2O95340 614 aaPredicted RBP3.62□□□□□ -1.83
CLK1-204ENST00000432425 PRSS2P07478 247 aa3.62□□□□□ -1.83
CLK1-204ENST00000432425 MMP3P08254 477 aa3.62□□□□□ -1.83
CLK1-204ENST00000432425 FGF3P11487 239 aaPredicted RBP3.62□□□□□ -1.83
CLK1-204ENST00000432425 CST5P28325 142 aaPredicted RBP3.62□□□□□ -1.83
CLK1-204ENST00000432425 AVPR2P30518 371 aa3.62□□□□□ -1.83
CLK1-204ENST00000432425 RFC1P35251 1148 aaPredicted RBP3.62□□□□□ -1.83
CLK1-204ENST00000432425 PNPLA4P41247 253 aa3.62□□□□□ -1.83
CLK1-204ENST00000432425 RFX5P48382 616 aaPredicted RBP3.62□□□□□ -1.83
CLK1-204ENST00000432425 PMS2P54278 862 aa3.62□□□□□ -1.83
CLK1-204ENST00000432425 PRKAA2P54646 552 aa3.62□□□□□ -1.83
CLK1-204ENST00000432425 CDH12P55289 794 aa3.62□□□□□ -1.83
CLK1-204ENST00000432425 THOC5Q13769 683 aaKnown RBP3.62□□□□□ -1.83
CLK1-204ENST00000432425 SYTL3Q4VX76 610 aa3.62□□□□□ -1.83
CLK1-204ENST00000432425 NADSYN1Q6IA69 706 aa3.62□□□□□ -1.83
CLK1-204ENST00000432425 CCDC174Q6PII3 467 aa3.62□□□□□ -1.83
CLK1-204ENST00000432425 RASGRP2Q7LDG7 609 aa3.62□□□□□ -1.83
CLK1-204ENST00000432425 ZDHHC23Q8IYP9 409 aa3.62□□□□□ -1.83
CLK1-204ENST00000432425 SCAIQ8N9R8 606 aa3.62□□□□□ -1.83
CLK1-204ENST00000432425 GFM1Q96RP9 751 aaKnown RBP3.62□□□□□ -1.83
CLK1-204ENST00000432425 TM6SF1Q9BZW5 370 aa3.62□□□□□ -1.83
CLK1-204ENST00000432425 G6PC2Q9NQR9 355 aa3.62□□□□□ -1.83
CLK1-204ENST00000432425 SEL1LQ9UBV2 794 aa3.62□□□□□ -1.83
CLK1-204ENST00000432425 SRP68Q9UHB9 627 aaKnown RBP3.62□□□□□ -1.83
CLK1-204ENST00000432425 ICKQ9UPZ9 632 aa3.62□□□□□ -1.83
CLK1-204ENST00000432425 OSGIN2Q9Y236 505 aa3.62□□□□□ -1.83
CLK1-204ENST00000432425 HSPB6O14558 160 aa3.61□□□□□ -1.83
CLK1-204ENST00000432425 ASAP2O43150 1006 aa3.61□□□□□ -1.83
CLK1-204ENST00000432425 GLUD1P00367 558 aa3.61□□□□□ -1.83
CLK1-204ENST00000432425 CSF1P09603 554 aa3.61□□□□□ -1.83
CLK1-204ENST00000432425 ENO3P13929 434 aaPredicted RBP3.61□□□□□ -1.83
CLK1-204ENST00000432425 GLUD2P49448 558 aa3.61□□□□□ -1.83
CLK1-204ENST00000432425 AARSP49588 968 aaKnown RBP eCLIP3.61□□□□□ -1.83
CLK1-204ENST00000432425 DSCR9P59020 149 aa3.61□□□□□ -1.83
CLK1-204ENST00000432425 ABATP80404 500 aa3.61□□□□□ -1.83
CLK1-204ENST00000432425 GOLGA8FQ08AF8 430 aa3.61□□□□□ -1.83
CLK1-204ENST00000432425 PKP1Q13835 747 aa3.61□□□□□ -1.83
CLK1-204ENST00000432425 NFATC4Q14934 902 aa3.61□□□□□ -1.83
CLK1-204ENST00000432425 PDCD2Q16342 344 aaPredicted RBP3.61□□□□□ -1.83
CLK1-204ENST00000432425 PRAMEF19Q5SWL8 479 aa3.61□□□□□ -1.83
CLK1-204ENST00000432425 C18orf65Q6ZTR6 163 aa3.61□□□□□ -1.83
CLK1-204ENST00000432425 SERPINA11Q86U17 422 aa3.61□□□□□ -1.83
CLK1-204ENST00000432425 DCP1BQ8IZD4 617 aaKnown RBP3.61□□□□□ -1.83
CLK1-204ENST00000432425 OR14A16Q8NHC5 309 aa3.61□□□□□ -1.83
CLK1-204ENST00000432425 CSGALNACT1Q8TDX6 532 aa3.61□□□□□ -1.83
CLK1-204ENST00000432425 KTI12Q96EK9 354 aaPredicted RBP3.61□□□□□ -1.83
CLK1-204ENST00000432425 IL36RNQ9UBH0 155 aa3.61□□□□□ -1.83
CLK1-204ENST00000432425 TCF20Q9UGU0 1960 aaKnown RBP3.6□□□□□ -1.83
CLK1-204ENST00000432425 DDTLA6NHG4 134 aaPredicted RBP3.6□□□□□ -1.83
CLK1-204ENST00000432425 EYA2O00167 538 aa3.6□□□□□ -1.83
CLK1-204ENST00000432425 IPO5O00410 1097 aaKnown RBP3.6□□□□□ -1.83
CLK1-204ENST00000432425 CBX6O95503 412 aa3.6□□□□□ -1.83
CLK1-204ENST00000432425 METTL18O95568 372 aa3.6□□□□□ -1.83
CLK1-204ENST00000432425 TNNT1P13805 278 aa3.6□□□□□ -1.83
CLK1-204ENST00000432425 ARSAP15289 507 aa3.6□□□□□ -1.83
CLK1-204ENST00000432425 YWHAQP27348 245 aa3.6□□□□□ -1.83
CLK1-204ENST00000432425 CHKAP35790 457 aa3.6□□□□□ -1.83
CLK1-204ENST00000432425 TRAF2Q12933 501 aa3.6□□□□□ -1.83
CLK1-204ENST00000432425 OS9Q13438 667 aaPredicted RBP3.6□□□□□ -1.83
CLK1-204ENST00000432425 BYSLQ13895 437 aaKnown RBP3.6□□□□□ -1.83
CLK1-204ENST00000432425 KEAP1Q14145 624 aa3.6□□□□□ -1.83
CLK1-204ENST00000432425 SHBQ15464 509 aa3.6□□□□□ -1.83
CLK1-204ENST00000432425 FAM83HQ6ZRV2 1179 aaPredicted RBP3.6□□□□□ -1.83
CLK1-204ENST00000432425 GALNT15Q8N3T1 639 aa3.6□□□□□ -1.83
CLK1-204ENST00000432425 ENAHQ8N8S7 591 aaPredicted RBP3.6□□□□□ -1.83
CLK1-204ENST00000432425 ADAMTS14Q8WXS8 1223 aa3.6□□□□□ -1.83
CLK1-204ENST00000432425 NCSTNQ92542 709 aa3.6□□□□□ -1.83
CLK1-204ENST00000432425 SLC39A13Q96H72 371 aa3.6□□□□□ -1.83
CLK1-204ENST00000432425 FAM84BQ96KN1 310 aaPredicted RBP3.6□□□□□ -1.83
CLK1-204ENST00000432425 CDT1Q9H211 546 aa3.6□□□□□ -1.83
CLK1-204ENST00000432425 hCG_1642624A0A1W2PR95 340 aa3.59□□□□□ -1.83
CLK1-204ENST00000432425 OR6C68A6NDL8 312 aa3.59□□□□□ -1.83
CLK1-204ENST00000432425 CLDN7O95471 211 aa3.59□□□□□ -1.83
CLK1-204ENST00000432425 NAGAP17050 411 aa3.59□□□□□ -1.83
CLK1-204ENST00000432425 GNLYP22749 145 aa3.59□□□□□ -1.83
CLK1-204ENST00000432425 DPP6P42658 865 aa3.59□□□□□ -1.83
CLK1-204ENST00000432425 NUDT6P53370 316 aa3.59□□□□□ -1.83
CLK1-204ENST00000432425 MVDP53602 400 aa3.59□□□□□ -1.83
CLK1-204ENST00000432425 ARHGAP8P85298 464 aa3.59□□□□□ -1.83
CLK1-204ENST00000432425 PRKG1Q13976 671 aa3.59□□□□□ -1.83
CLK1-204ENST00000432425 HNF4GQ14541 408 aa3.59□□□□□ -1.83
CLK1-204ENST00000432425 ZNF284Q2VY69 593 aa3.59□□□□□ -1.83
CLK1-204ENST00000432425 TDRD12Q587J7 1177 aaKnown RBP3.59□□□□□ -1.83
CLK1-204ENST00000432425 ATG9BQ674R7 924 aa3.59□□□□□ -1.83
CLK1-204ENST00000432425 NCAPH2Q6IBW4 605 aa3.59□□□□□ -1.83
CLK1-204ENST00000432425 JMJD6Q6NYC1 403 aaPredicted RBP3.59□□□□□ -1.83
CLK1-204ENST00000432425 MON1BQ7L1V2 547 aa3.59□□□□□ -1.83
CLK1-204ENST00000432425 TMC8Q8IU68 726 aa3.59□□□□□ -1.83
CLK1-204ENST00000432425 RBMXL3Q8N7X1 1067 aaKnown RBP3.59□□□□□ -1.83
CLK1-204ENST00000432425 MIGA1Q8NAN2 632 aa3.59□□□□□ -1.83
CLK1-204ENST00000432425 TMEM163Q8TC26 289 aa3.59□□□□□ -1.83
CLK1-204ENST00000432425 TRAPPC12Q8WVT3 735 aa3.59□□□□□ -1.83
CLK1-204ENST00000432425 THAP4Q8WY91 577 aa3.59□□□□□ -1.83
CLK1-204ENST00000432425 C6orf106Q9H6K1 298 aaPredicted RBP3.59□□□□□ -1.83
CLK1-204ENST00000432425 RMI1Q9H9A7 625 aa3.59□□□□□ -1.83
CLK1-204ENST00000432425 CHODLQ9H9P2 273 aa3.59□□□□□ -1.83
CLK1-204ENST00000432425 FBXO40Q9UH90 709 aa3.59□□□□□ -1.83
CLK1-204ENST00000432425 ZNF112Q9UJU3 913 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms