RNA–Protein interactions for RNA: ENST00000431127.1

CTDSP1-203, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-203ENST00000431127 ARHGAP42A6NI28 874 aa17.72■□□□□ 0.43
CTDSP1-203ENST00000431127 BUB1O43683 1085 aa17.72■□□□□ 0.43
CTDSP1-203ENST00000431127 RNASEH2AO75792 299 aaKnown RBP17.72■□□□□ 0.43
CTDSP1-203ENST00000431127 KRT7P08729 469 aa17.72■□□□□ 0.43
CTDSP1-203ENST00000431127 LMNB2Q03252 620 aa17.72■□□□□ 0.43
CTDSP1-203ENST00000431127 KRT81Q14533 505 aa17.72■□□□□ 0.43
CTDSP1-203ENST00000431127 MESDQ14696 234 aa17.72■□□□□ 0.43
CTDSP1-203ENST00000431127 WDR45BQ5MNZ6 344 aa17.72■□□□□ 0.43
CTDSP1-203ENST00000431127 ARMCX6Q7L4S7 300 aa17.72■□□□□ 0.43
CTDSP1-203ENST00000431127 RABEPKQ7Z6M1 372 aa17.72■□□□□ 0.43
CTDSP1-203ENST00000431127 DEFB119Q8N690 84 aa17.72■□□□□ 0.43
CTDSP1-203ENST00000431127 TMIEQ8NEW7 156 aa17.72■□□□□ 0.43
CTDSP1-203ENST00000431127 PIGKQ92643 395 aa17.72■□□□□ 0.43
CTDSP1-203ENST00000431127 HSPA12BQ96MM6 686 aa17.72■□□□□ 0.43
CTDSP1-203ENST00000431127 LRRC19Q9H756 370 aa17.72■□□□□ 0.43
CTDSP1-203ENST00000431127 A0A1W2PP55 124 aa17.71■□□□□ 0.43
CTDSP1-203ENST00000431127 METTL12A8MUP2 240 aa17.71■□□□□ 0.43
CTDSP1-203ENST00000431127 SEMA4FO95754 770 aa17.71■□□□□ 0.43
CTDSP1-203ENST00000431127 CD160O95971 181 aa17.71■□□□□ 0.43
CTDSP1-203ENST00000431127 PRNPP04156 253 aa17.71■□□□□ 0.43
CTDSP1-203ENST00000431127 SDHBP21912 280 aa17.71■□□□□ 0.43
CTDSP1-203ENST00000431127 ITPKAP23677 461 aa17.71■□□□□ 0.43
CTDSP1-203ENST00000431127 CHRNA3P32297 505 aa17.71■□□□□ 0.43
CTDSP1-203ENST00000431127 ACSL1P33121 698 aa17.71■□□□□ 0.43
CTDSP1-203ENST00000431127 DNA2P51530 1060 aa17.71■□□□□ 0.43
CTDSP1-203ENST00000431127 CDH6P55285 790 aa17.71■□□□□ 0.43
CTDSP1-203ENST00000431127 CCDC15Q0P6D6 951 aa17.71■□□□□ 0.43
CTDSP1-203ENST00000431127 INO80DQ53TQ3 878 aaPredicted RBP17.71■□□□□ 0.43
CTDSP1-203ENST00000431127 CARD16Q5EG05 197 aa17.71■□□□□ 0.43
CTDSP1-203ENST00000431127 TXNRD3NBQ6F5E7 133 aa17.71■□□□□ 0.43
CTDSP1-203ENST00000431127 PRR23CQ6ZRP0 262 aa17.71■□□□□ 0.43
CTDSP1-203ENST00000431127 SLC41A1Q8IVJ1 513 aa17.71■□□□□ 0.43
CTDSP1-203ENST00000431127 MAP7D3Q8IWC1 876 aa17.71■□□□□ 0.43
CTDSP1-203ENST00000431127 HDDC3Q8N4P3 179 aa17.71■□□□□ 0.43
CTDSP1-203ENST00000431127 C12orf50Q8NA57 414 aaPredicted RBP17.71■□□□□ 0.43
CTDSP1-203ENST00000431127 CEP76Q8TAP6 659 aa17.71■□□□□ 0.43
CTDSP1-203ENST00000431127 PIP4K2CQ8TBX8 421 aa17.71■□□□□ 0.43
CTDSP1-203ENST00000431127 CSPG4P5Q96PW8 444 aa17.71■□□□□ 0.43
CTDSP1-203ENST00000431127 NEUROG2Q9H2A3 272 aa17.71■□□□□ 0.43
CTDSP1-203ENST00000431127 TNKS2Q9H2K2 1166 aa17.71■□□□□ 0.43
CTDSP1-203ENST00000431127 PCDH18Q9HCL0 1135 aa17.71■□□□□ 0.43
CTDSP1-203ENST00000431127 PILRBQ9UKJ0 227 aa17.71■□□□□ 0.43
CTDSP1-203ENST00000431127 FCF1Q9Y324 198 aaKnown RBP17.71■□□□□ 0.43
CTDSP1-203ENST00000431127 PCDHA13Q9Y5I0 950 aa17.71■□□□□ 0.43
CTDSP1-203ENST00000431127 EPN1Q9Y6I3 576 aaPredicted RBP17.71■□□□□ 0.43
CTDSP1-203ENST00000431127 CACNA1AO00555 2505 aa17.71■□□□□ 0.43
CTDSP1-203ENST00000431127 CEP250Q9BV73 2442 aa17.71■□□□□ 0.43
CTDSP1-203ENST00000431127 TMEM110-MUSTN1A8MSY1 372 aa17.7■□□□□ 0.42
CTDSP1-203ENST00000431127 MEI4A8MW99 385 aa17.7■□□□□ 0.42
CTDSP1-203ENST00000431127 PRR5-ARHGAP8B1AHC4 643 aa17.7■□□□□ 0.42
CTDSP1-203ENST00000431127 SLC7A4O43246 635 aa17.7■□□□□ 0.42
CTDSP1-203ENST00000431127 ZNF821O75541 412 aaPredicted RBP17.7■□□□□ 0.42
CTDSP1-203ENST00000431127 NDUFA10O95299 355 aa17.7■□□□□ 0.42
CTDSP1-203ENST00000431127 SLC1A1P43005 524 aa17.7■□□□□ 0.42
CTDSP1-203ENST00000431127 ARHGAP8P85298 464 aa17.7■□□□□ 0.42
CTDSP1-203ENST00000431127 PDK2Q15119 407 aa17.7■□□□□ 0.42
CTDSP1-203ENST00000431127 PEAR1Q5VY43 1037 aaPredicted RBP17.7■□□□□ 0.42
CTDSP1-203ENST00000431127 AFMIDQ63HM1 303 aa17.7■□□□□ 0.42
CTDSP1-203ENST00000431127 TMCO3Q6UWJ1 677 aa17.7■□□□□ 0.42
CTDSP1-203ENST00000431127 DPY19L3Q6ZPD9 716 aa17.7■□□□□ 0.42
CTDSP1-203ENST00000431127 AADATQ8N5Z0 425 aa17.7■□□□□ 0.42
CTDSP1-203ENST00000431127 KCTD6Q8NC69 237 aa17.7■□□□□ 0.42
CTDSP1-203ENST00000431127 FAM71BQ8TC56 605 aa17.7■□□□□ 0.42
CTDSP1-203ENST00000431127 CELF6Q96J87 481 aaKnown RBP17.7■□□□□ 0.42
CTDSP1-203ENST00000431127 BAG1Q99933 345 aaPredicted RBP17.7■□□□□ 0.42
CTDSP1-203ENST00000431127 SLC39A8Q9C0K1 460 aa17.7■□□□□ 0.42
CTDSP1-203ENST00000431127 KLC2Q9H0B6 622 aa17.7■□□□□ 0.42
CTDSP1-203ENST00000431127 SUSD2Q9UGT4 822 aa17.7■□□□□ 0.42
CTDSP1-203ENST00000431127 IL36AQ9UHA7 158 aa17.7■□□□□ 0.42
CTDSP1-203ENST00000431127 CHD5Q8TDI0 1954 aa17.7■□□□□ 0.42
CTDSP1-203ENST00000431127 MED19A0JLT2 244 aaPredicted RBP17.69■□□□□ 0.42
CTDSP1-203ENST00000431127 SOWAHDA6NJG2 315 aa17.69■□□□□ 0.42
CTDSP1-203ENST00000431127 LRRC72A6NJI9 287 aa17.69■□□□□ 0.42
CTDSP1-203ENST00000431127 KHNYNO15037 678 aaKnown RBP17.69■□□□□ 0.42
CTDSP1-203ENST00000431127 GSRP00390 522 aa17.69■□□□□ 0.42
CTDSP1-203ENST00000431127 GNSP15586 552 aa17.69■□□□□ 0.42
CTDSP1-203ENST00000431127 AMPD1P23109 780 aa17.69■□□□□ 0.42
CTDSP1-203ENST00000431127 SERPINB6P35237 376 aa17.69■□□□□ 0.42
CTDSP1-203ENST00000431127 PAPOLAP51003 745 aaKnown RBP17.69■□□□□ 0.42
CTDSP1-203ENST00000431127 HADHBP55084 474 aaKnown RBP17.69■□□□□ 0.42
CTDSP1-203ENST00000431127 SNRPD1P62314 119 aaKnown RBP17.69■□□□□ 0.42
CTDSP1-203ENST00000431127 CCDC6Q16204 474 aa17.69■□□□□ 0.42
CTDSP1-203ENST00000431127 RGL4Q8IZJ4 473 aa17.69■□□□□ 0.42
CTDSP1-203ENST00000431127 SPC24Q8NBT2 197 aa17.69■□□□□ 0.42
CTDSP1-203ENST00000431127 OR2AP1Q8NGE2 309 aa17.69■□□□□ 0.42
CTDSP1-203ENST00000431127 DNASE2BQ8WZ79 361 aa17.69■□□□□ 0.42
CTDSP1-203ENST00000431127 TSC1Q92574 1164 aa17.69■□□□□ 0.42
CTDSP1-203ENST00000431127 PPP1R16AQ96I34 528 aa17.69■□□□□ 0.42
CTDSP1-203ENST00000431127 LRIG1Q96JA1 1093 aa17.69■□□□□ 0.42
CTDSP1-203ENST00000431127 HEPHQ9BQS7 1158 aa17.69■□□□□ 0.42
CTDSP1-203ENST00000431127 KDM4CQ9H3R0 1056 aa17.69■□□□□ 0.42
CTDSP1-203ENST00000431127 DYRK4Q9NR20 520 aa17.69■□□□□ 0.42
CTDSP1-203ENST00000431127 UBA2Q9UBT2 640 aaPredicted RBP17.69■□□□□ 0.42
CTDSP1-203ENST00000431127 SERGEFQ9UGK8 458 aa17.69■□□□□ 0.42
CTDSP1-203ENST00000431127 EVLQ9UI08 416 aaPredicted RBP17.69■□□□□ 0.42
CTDSP1-203ENST00000431127 SARDHQ9UL12 918 aa17.69■□□□□ 0.42
CTDSP1-203ENST00000431127 TPX2Q9ULW0 747 aaKnown RBP17.69■□□□□ 0.42
CTDSP1-203ENST00000431127 ACTL7AQ9Y615 435 aa17.69■□□□□ 0.42
CTDSP1-203ENST00000431127 A0A0A6YYK5 440 aaPredicted RBP17.68■□□□□ 0.42
CTDSP1-203ENST00000431127 DFFAO00273 331 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms