RNA–Protein interactions for RNA: ENST00000429427.1

SSR4P1-202, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

TSL 5 BASIC

Gene SSR4P1, Length 967 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-202ENST00000429427 SNRNP25Q9BV90 132 aaKnown RBP18.47■□□□□ 0.55
SSR4P1-202ENST00000429427 THAP2Q9H0W7 228 aa18.47■□□□□ 0.55
SSR4P1-202ENST00000429427 OSGEPQ9NPF4 335 aa18.47■□□□□ 0.55
SSR4P1-202ENST00000429427 DNAAF2Q9NVR5 837 aaKnown RBP18.47■□□□□ 0.55
SSR4P1-202ENST00000429427 PCSK1NQ9UHG2 260 aa18.47■□□□□ 0.55
SSR4P1-202ENST00000429427 AP4E1Q9UPM8 1137 aa18.47■□□□□ 0.55
SSR4P1-202ENST00000429427 PLXNA2O75051 1894 aa18.47■□□□□ 0.55
SSR4P1-202ENST00000429427 WASH4PA8MWX3 477 aa18.46■□□□□ 0.55
SSR4P1-202ENST00000429427 PLRG1O43660 514 aaKnown RBP18.46■□□□□ 0.55
SSR4P1-202ENST00000429427 RAMP2O60895 175 aa18.46■□□□□ 0.55
SSR4P1-202ENST00000429427 ADRB1P08588 477 aa18.46■□□□□ 0.55
SSR4P1-202ENST00000429427 MYBL1P10243 752 aa18.46■□□□□ 0.55
SSR4P1-202ENST00000429427 CD59P13987 128 aa18.46■□□□□ 0.55
SSR4P1-202ENST00000429427 IL1R2P27930 398 aa18.46■□□□□ 0.55
SSR4P1-202ENST00000429427 PSAPL1Q6NUJ1 521 aa18.46■□□□□ 0.55
SSR4P1-202ENST00000429427 RETSATQ6NUM9 610 aa18.46■□□□□ 0.55
SSR4P1-202ENST00000429427 DSG4Q86SJ6 1040 aa18.46■□□□□ 0.55
SSR4P1-202ENST00000429427 NETO2Q8NC67 525 aa18.46■□□□□ 0.55
SSR4P1-202ENST00000429427 GRIN3AQ8TCU5 1115 aa18.46■□□□□ 0.55
SSR4P1-202ENST00000429427 IQCDQ96DY2 449 aa18.46■□□□□ 0.55
SSR4P1-202ENST00000429427 HMCESQ96FZ2 354 aa18.46■□□□□ 0.55
SSR4P1-202ENST00000429427 SLC6A18Q96N87 628 aa18.46■□□□□ 0.55
SSR4P1-202ENST00000429427 KCTD15Q96SI1 283 aaPredicted RBP18.46■□□□□ 0.55
SSR4P1-202ENST00000429427 EPAS1Q99814 870 aa18.46■□□□□ 0.55
SSR4P1-202ENST00000429427 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.46■□□□□ 0.55
SSR4P1-202ENST00000429427 CEP44Q9C0F1 390 aa18.46■□□□□ 0.55
SSR4P1-202ENST00000429427 MAGEH1Q9H213 219 aa18.46■□□□□ 0.55
SSR4P1-202ENST00000429427 BZW2Q9Y6E2 419 aaKnown RBP18.46■□□□□ 0.55
SSR4P1-202ENST00000429427 A0A1W2PPC4 97 aa18.45■□□□□ 0.54
SSR4P1-202ENST00000429427 LRRC72A6NJI9 287 aa18.45■□□□□ 0.54
SSR4P1-202ENST00000429427 LATO43561 262 aa18.45■□□□□ 0.54
SSR4P1-202ENST00000429427 WNT1P04628 370 aa18.45■□□□□ 0.54
SSR4P1-202ENST00000429427 SYPP08247 313 aa18.45■□□□□ 0.54
SSR4P1-202ENST00000429427 KCNA4P22459 653 aa18.45■□□□□ 0.54
SSR4P1-202ENST00000429427 AFF3P51826 1226 aaKnown RBP18.45■□□□□ 0.54
SSR4P1-202ENST00000429427 SLC20A2Q08357 652 aa18.45■□□□□ 0.54
SSR4P1-202ENST00000429427 POLD3Q15054 466 aaPredicted RBP18.45■□□□□ 0.54
SSR4P1-202ENST00000429427 KIF19Q2TAC6 998 aa18.45■□□□□ 0.54
SSR4P1-202ENST00000429427 N4BP2L1Q5TBK1 243 aaPredicted RBP18.45■□□□□ 0.54
SSR4P1-202ENST00000429427 FAM46CQ5VWP2 391 aa18.45■□□□□ 0.54
SSR4P1-202ENST00000429427 UMODL1-AS1Q8N2C9 162 aa18.45■□□□□ 0.54
SSR4P1-202ENST00000429427 DEFB124Q8NES8 71 aa18.45■□□□□ 0.54
SSR4P1-202ENST00000429427 TMIEQ8NEW7 156 aa18.45■□□□□ 0.54
SSR4P1-202ENST00000429427 TRIM11Q96F44 468 aa18.45■□□□□ 0.54
SSR4P1-202ENST00000429427 BTBD6Q96KE9 485 aa18.45■□□□□ 0.54
SSR4P1-202ENST00000429427 DNAJC7Q99615 494 aa18.45■□□□□ 0.54
SSR4P1-202ENST00000429427 FNDC3AQ9Y2H6 1198 aaKnown RBP18.45■□□□□ 0.54
SSR4P1-202ENST00000429427 SCINQ9Y6U3 715 aa18.45■□□□□ 0.54
SSR4P1-202ENST00000429427 CXorf51AA0A1B0GTR3 108 aa18.44■□□□□ 0.54
SSR4P1-202ENST00000429427 C1QTNF3-AMACRE9PGA6 284 aa18.44■□□□□ 0.54
SSR4P1-202ENST00000429427 SLC7A4O43246 635 aa18.44■□□□□ 0.54
SSR4P1-202ENST00000429427 KDELR3O43731 214 aa18.44■□□□□ 0.54
SSR4P1-202ENST00000429427 LEFTY1O75610 366 aa18.44■□□□□ 0.54
SSR4P1-202ENST00000429427 CYP1A2P05177 515 aa18.44■□□□□ 0.54
SSR4P1-202ENST00000429427 CSRP1P21291 193 aaKnown RBP18.44■□□□□ 0.54
SSR4P1-202ENST00000429427 GKP32189 559 aa18.44■□□□□ 0.54
SSR4P1-202ENST00000429427 ETFBP38117 255 aa18.44■□□□□ 0.54
SSR4P1-202ENST00000429427 NOVA1P51513 510 aaKnown RBP18.44■□□□□ 0.54
SSR4P1-202ENST00000429427 CCR5P51681 352 aa18.44■□□□□ 0.54
SSR4P1-202ENST00000429427 CCNHP51946 323 aaPredicted RBP18.44■□□□□ 0.54
SSR4P1-202ENST00000429427 ATXN3P54252 364 aaPredicted RBP18.44■□□□□ 0.54
SSR4P1-202ENST00000429427 SFSWAPQ12872 951 aaKnown RBP18.44■□□□□ 0.54
SSR4P1-202ENST00000429427 ASTE1Q2TB18 679 aaPredicted RBP18.44■□□□□ 0.54
SSR4P1-202ENST00000429427 ARSIQ5FYB1 569 aa18.44■□□□□ 0.54
SSR4P1-202ENST00000429427 ERMARDQ5T6L9 678 aa18.44■□□□□ 0.54
SSR4P1-202ENST00000429427 SPECC1LQ69YQ0 1117 aa18.44■□□□□ 0.54
SSR4P1-202ENST00000429427 TXNRD3NBQ6F5E7 133 aa18.44■□□□□ 0.54
SSR4P1-202ENST00000429427 VSTM4Q8IW00 320 aa18.44■□□□□ 0.54
SSR4P1-202ENST00000429427 PCDH20Q8N6Y1 951 aaKnown RBP18.44■□□□□ 0.54
SSR4P1-202ENST00000429427 OR6K2Q8NGY2 324 aa18.44■□□□□ 0.54
SSR4P1-202ENST00000429427 TM6SF2Q9BZW4 377 aa18.44■□□□□ 0.54
SSR4P1-202ENST00000429427 DHX35Q9H5Z1 703 aaKnown RBP18.44■□□□□ 0.54
SSR4P1-202ENST00000429427 LRRC19Q9H756 370 aa18.44■□□□□ 0.54
SSR4P1-202ENST00000429427 IL36AQ9UHA7 158 aa18.44■□□□□ 0.54
SSR4P1-202ENST00000429427 SNX11Q9Y5W9 270 aa18.44■□□□□ 0.54
SSR4P1-202ENST00000429427 UPK3BL1B0FP48 263 aa18.43■□□□□ 0.54
SSR4P1-202ENST00000429427 RASA4BC9J798 803 aa18.43■□□□□ 0.54
SSR4P1-202ENST00000429427 UPK3BL2E5RIL1 263 aa18.43■□□□□ 0.54
SSR4P1-202ENST00000429427 KPNA3O00505 521 aaPredicted RBP18.43■□□□□ 0.54
SSR4P1-202ENST00000429427 RASA4O43374 803 aa18.43■□□□□ 0.54
SSR4P1-202ENST00000429427 OPHN1O60890 802 aa18.43■□□□□ 0.54
SSR4P1-202ENST00000429427 EIF4A3P38919 411 aaKnown RBP18.43■□□□□ 0.54
SSR4P1-202ENST00000429427 GRIA4P48058 902 aa18.43■□□□□ 0.54
SSR4P1-202ENST00000429427 TPI1P60174 286 aa18.43■□□□□ 0.54
SSR4P1-202ENST00000429427 FAM193AP78312 1265 aa18.43■□□□□ 0.54
SSR4P1-202ENST00000429427 SERINC3Q13530 473 aa18.43■□□□□ 0.54
SSR4P1-202ENST00000429427 HLA-BQ31612 363 aa18.43■□□□□ 0.54
SSR4P1-202ENST00000429427 CARD16Q5EG05 197 aa18.43■□□□□ 0.54
SSR4P1-202ENST00000429427 ALKBH5Q6P6C2 394 aaKnown RBP18.43■□□□□ 0.54
SSR4P1-202ENST00000429427 CPNE8Q86YQ8 564 aa18.43■□□□□ 0.54
SSR4P1-202ENST00000429427 NPWQ8N729 165 aa18.43■□□□□ 0.54
SSR4P1-202ENST00000429427 ISG20Q96AZ6 181 aaKnown RBP18.43■□□□□ 0.54
SSR4P1-202ENST00000429427 ZDHHC5Q9C0B5 715 aa18.43■□□□□ 0.54
SSR4P1-202ENST00000429427 ANKRD6Q9Y2G4 727 aa18.43■□□□□ 0.54
SSR4P1-202ENST00000429427 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.43■□□□□ 0.54
SSR4P1-202ENST00000429427 ACACBO00763 2458 aa18.43■□□□□ 0.54
SSR4P1-202ENST00000429427 TBC1D3DA0A087WVF3 549 aa18.42■□□□□ 0.54
SSR4P1-202ENST00000429427 TBC1D3IA0A087WXS9 549 aa18.42■□□□□ 0.54
SSR4P1-202ENST00000429427 TBC1D3EA0A087X179 549 aa18.42■□□□□ 0.54
SSR4P1-202ENST00000429427 TBC1D3KA0A087X1G2 549 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms