RNA–Protein interactions for RNA: ENST00000429246.5

ARPC1B-206, Transcript of actin related protein 2/3 complex subunit 1B, humanhuman

TSL 5

Gene ARPC1B, Length 348 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1B-206ENST00000429246 ZNF776Q68DI1 518 aaPredicted RBP20.47■□□□□ 0.87
ARPC1B-206ENST00000429246 ZNF354CQ86Y25 554 aa20.47■□□□□ 0.87
ARPC1B-206ENST00000429246 PLPP6Q8IY26 295 aa20.47■□□□□ 0.87
ARPC1B-206ENST00000429246 KATNAL2Q8IYT4 538 aa20.47■□□□□ 0.87
ARPC1B-206ENST00000429246 SYCE1Q8N0S2 351 aa20.47■□□□□ 0.87
ARPC1B-206ENST00000429246 PCDH20Q8N6Y1 951 aaKnown RBP20.47■□□□□ 0.87
ARPC1B-206ENST00000429246 SIPA1Q96FS4 1042 aa20.47■□□□□ 0.87
ARPC1B-206ENST00000429246 SPACA7Q96KW9 195 aa20.47■□□□□ 0.87
ARPC1B-206ENST00000429246 PDFQ9HBH1 243 aa20.47■□□□□ 0.87
ARPC1B-206ENST00000429246 USP36Q9P275 1121 aaKnown RBP20.47■□□□□ 0.87
ARPC1B-206ENST00000429246 TRIM10Q9UDY6 481 aa20.47■□□□□ 0.87
ARPC1B-206ENST00000429246 SCML1Q9UN30 329 aa20.47■□□□□ 0.87
ARPC1B-206ENST00000429246 ABCA7Q8IZY2 2146 aa20.47■□□□□ 0.87
ARPC1B-206ENST00000429246 MACROD2A1Z1Q3 448 aa20.46■□□□□ 0.87
ARPC1B-206ENST00000429246 K7ERQ8 282 aa20.46■□□□□ 0.87
ARPC1B-206ENST00000429246 SMAD6O43541 496 aaKnown RBP20.46■□□□□ 0.87
ARPC1B-206ENST00000429246 PRAMEF11O60813 436 aa20.46■□□□□ 0.87
ARPC1B-206ENST00000429246 RNASEH1O60930 286 aaKnown RBP20.46■□□□□ 0.87
ARPC1B-206ENST00000429246 VAV1P15498 845 aa20.46■□□□□ 0.87
ARPC1B-206ENST00000429246 CTNNA1P35221 906 aaKnown RBP20.46■□□□□ 0.87
ARPC1B-206ENST00000429246 PAPOLAP51003 745 aaKnown RBP20.46■□□□□ 0.87
ARPC1B-206ENST00000429246 RPS14P62263 151 aaKnown RBP20.46■□□□□ 0.87
ARPC1B-206ENST00000429246 ODF2Q5BJF6 829 aa20.46■□□□□ 0.87
ARPC1B-206ENST00000429246 NCBP2-AS2Q69YL0 99 aa20.46■□□□□ 0.87
ARPC1B-206ENST00000429246 KIAA1324Q6UXG2 1013 aaKnown RBP20.46■□□□□ 0.87
ARPC1B-206ENST00000429246 Q6ZVU0 165 aa20.46■□□□□ 0.87
ARPC1B-206ENST00000429246 DSG4Q86SJ6 1040 aa20.46■□□□□ 0.87
ARPC1B-206ENST00000429246 LRRC49Q8IUZ0 686 aa20.46■□□□□ 0.87
ARPC1B-206ENST00000429246 OR8D1Q8WZ84 308 aa20.46■□□□□ 0.87
ARPC1B-206ENST00000429246 ERLEC1Q96DZ1 483 aa20.46■□□□□ 0.87
ARPC1B-206ENST00000429246 RNF157Q96PX1 679 aa20.46■□□□□ 0.87
ARPC1B-206ENST00000429246 FAM129BQ96TA1 746 aa20.46■□□□□ 0.87
ARPC1B-206ENST00000429246 SLC6A17Q9H1V8 727 aa20.46■□□□□ 0.87
ARPC1B-206ENST00000429246 MFHAS1Q9Y4C4 1052 aa20.46■□□□□ 0.87
ARPC1B-206ENST00000429246 NCOR2Q9Y618 2525 aa20.46■□□□□ 0.87
ARPC1B-206ENST00000429246 GPR179Q6PRD1 2367 aa20.45■□□□□ 0.86
ARPC1B-206ENST00000429246 MCF2LO15068 1137 aa20.45■□□□□ 0.86
ARPC1B-206ENST00000429246 ZNF821O75541 412 aaPredicted RBP20.45■□□□□ 0.86
ARPC1B-206ENST00000429246 CTNNA2P26232 953 aa20.45■□□□□ 0.86
ARPC1B-206ENST00000429246 IL10RBQ08334 325 aa20.45■□□□□ 0.86
ARPC1B-206ENST00000429246 TAZQ16635 292 aa20.45■□□□□ 0.86
ARPC1B-206ENST00000429246 MAP7D1Q3KQU3 841 aa20.45■□□□□ 0.86
ARPC1B-206ENST00000429246 STK40Q8N2I9 435 aa20.45■□□□□ 0.86
ARPC1B-206ENST00000429246 PQLC3Q8N755 202 aa20.45■□□□□ 0.86
ARPC1B-206ENST00000429246 OR2A12Q8NGT7 310 aa20.45■□□□□ 0.86
ARPC1B-206ENST00000429246 UBE2Q2Q8WVN8 375 aa20.45■□□□□ 0.86
ARPC1B-206ENST00000429246 ITM2CQ9NQX7 267 aa20.45■□□□□ 0.86
ARPC1B-206ENST00000429246 FARP1Q9Y4F1 1045 aaPredicted RBP20.45■□□□□ 0.86
ARPC1B-206ENST00000429246 PCDHA3Q9Y5H8 950 aa20.45■□□□□ 0.86
ARPC1B-206ENST00000429246 CACNA1BQ00975 2339 aa20.45■□□□□ 0.86
ARPC1B-206ENST00000429246 CCDC66A2RUB6 948 aa20.44■□□□□ 0.86
ARPC1B-206ENST00000429246 DFFAO00273 331 aa20.44■□□□□ 0.86
ARPC1B-206ENST00000429246 MFSD11O43934 449 aa20.44■□□□□ 0.86
ARPC1B-206ENST00000429246 TMCC1O94876 653 aa20.44■□□□□ 0.86
ARPC1B-206ENST00000429246 ADH1BP00325 375 aa20.44■□□□□ 0.86
ARPC1B-206ENST00000429246 DNTTP04053 509 aa20.44■□□□□ 0.86
ARPC1B-206ENST00000429246 ACADMP11310 421 aa20.44■□□□□ 0.86
ARPC1B-206ENST00000429246 TNNT1P13805 278 aa20.44■□□□□ 0.86
ARPC1B-206ENST00000429246 SRSF5Q13243 272 aaKnown RBP20.44■□□□□ 0.86
ARPC1B-206ENST00000429246 RFTN1Q14699 578 aaPredicted RBP20.44■□□□□ 0.86
ARPC1B-206ENST00000429246 CST6Q15828 149 aa20.44■□□□□ 0.86
ARPC1B-206ENST00000429246 TTC31Q49AM3 519 aaPredicted RBP20.44■□□□□ 0.86
ARPC1B-206ENST00000429246 SLC9A4Q6AI14 798 aa20.44■□□□□ 0.86
ARPC1B-206ENST00000429246 NT5DC3Q86UY8 548 aa20.44■□□□□ 0.86
ARPC1B-206ENST00000429246 EXD1Q8NHP7 514 aa20.44■□□□□ 0.86
ARPC1B-206ENST00000429246 RBM41Q96IZ5 413 aaKnown RBP20.44■□□□□ 0.86
ARPC1B-206ENST00000429246 ZC3H10Q96K80 434 aaKnown RBP20.44■□□□□ 0.86
ARPC1B-206ENST00000429246 SP110Q9HB58 689 aa20.44■□□□□ 0.86
ARPC1B-206ENST00000429246 UBA2Q9UBT2 640 aaPredicted RBP20.44■□□□□ 0.86
ARPC1B-206ENST00000429246 FCF1Q9Y324 198 aaKnown RBP20.44■□□□□ 0.86
ARPC1B-206ENST00000429246 ACTL7AQ9Y615 435 aa20.44■□□□□ 0.86
ARPC1B-206ENST00000429246 CAPN6Q9Y6Q1 641 aa20.44■□□□□ 0.86
ARPC1B-206ENST00000429246 NUMA1Q14980 2115 aa20.44■□□□□ 0.86
ARPC1B-206ENST00000429246 IGHV1OR15-9A0A0B4J2B8 117 aa20.43■□□□□ 0.86
ARPC1B-206ENST00000429246 J3KR12 359 aa20.43■□□□□ 0.86
ARPC1B-206ENST00000429246 PALMO75781 387 aa20.43■□□□□ 0.86
ARPC1B-206ENST00000429246 GSRP00390 522 aa20.43■□□□□ 0.86
ARPC1B-206ENST00000429246 PTMAP06454 111 aaKnown RBP20.43■□□□□ 0.86
ARPC1B-206ENST00000429246 RECQLP46063 649 aaPredicted RBP20.43■□□□□ 0.86
ARPC1B-206ENST00000429246 TPMTP51580 245 aa20.43■□□□□ 0.86
ARPC1B-206ENST00000429246 GALNT2Q10471 571 aa20.43■□□□□ 0.86
ARPC1B-206ENST00000429246 SFSWAPQ12872 951 aaKnown RBP20.43■□□□□ 0.86
ARPC1B-206ENST00000429246 SIM2Q14190 667 aaPredicted RBP20.43■□□□□ 0.86
ARPC1B-206ENST00000429246 SLC36A4Q6YBV0 504 aa20.43■□□□□ 0.86
ARPC1B-206ENST00000429246 USP30Q70CQ3 517 aa20.43■□□□□ 0.86
ARPC1B-206ENST00000429246 TP53INP2Q8IXH6 220 aa20.43■□□□□ 0.86
ARPC1B-206ENST00000429246 RCOR2Q8IZ40 523 aa20.43■□□□□ 0.86
ARPC1B-206ENST00000429246 KRT35Q92764 455 aa20.43■□□□□ 0.86
ARPC1B-206ENST00000429246 ZNF599Q96NL3 588 aa20.43■□□□□ 0.86
ARPC1B-206ENST00000429246 PABPC3Q9H361 631 aaKnown RBP20.43■□□□□ 0.86
ARPC1B-206ENST00000429246 IPO11Q9UI26 975 aaKnown RBP20.43■□□□□ 0.86
ARPC1B-206ENST00000429246 SMG5Q9UPR3 1016 aaKnown RBP20.43■□□□□ 0.86
ARPC1B-206ENST00000429246 MIF4GDA9UHW6 222 aaKnown RBP20.42■□□□□ 0.86
ARPC1B-206ENST00000429246 C1QTNF3-AMACRE9PGA6 284 aa20.42■□□□□ 0.86
ARPC1B-206ENST00000429246 ZRANB2O95218 330 aaKnown RBP eCLIP20.42■□□□□ 0.86
ARPC1B-206ENST00000429246 ZFXP17010 805 aaPredicted RBP20.42■□□□□ 0.86
ARPC1B-206ENST00000429246 C5AR1P21730 350 aa20.42■□□□□ 0.86
ARPC1B-206ENST00000429246 OXTRP30559 389 aa20.42■□□□□ 0.86
ARPC1B-206ENST00000429246 CDKN2BP42772 138 aa20.42■□□□□ 0.86
ARPC1B-206ENST00000429246 MARCKSL1P49006 195 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms