RNA–Protein interactions for RNA: ENST00000428843.5

PTPN18-205, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-205ENST00000428843 TFDP2Q14188 446 aa22.74■■□□□ 1.23
PTPN18-205ENST00000428843 PPP2R5EQ16537 467 aa22.74■■□□□ 1.23
PTPN18-205ENST00000428843 LONP2Q86WA8 852 aa22.74■■□□□ 1.23
PTPN18-205ENST00000428843 TMPRSS6Q8IU80 811 aa22.74■■□□□ 1.23
PTPN18-205ENST00000428843 ATPAF2Q8N5M1 289 aa22.74■■□□□ 1.23
PTPN18-205ENST00000428843 PCDH20Q8N6Y1 951 aaKnown RBP22.74■■□□□ 1.23
PTPN18-205ENST00000428843 TRIM58Q8NG06 486 aa22.74■■□□□ 1.23
PTPN18-205ENST00000428843 CASKIN2Q8WXE0 1202 aa22.74■■□□□ 1.23
PTPN18-205ENST00000428843 FAM129BQ96TA1 746 aa22.74■■□□□ 1.23
PTPN18-205ENST00000428843 TNKS2Q9H2K2 1166 aa22.74■■□□□ 1.23
PTPN18-205ENST00000428843 ZSCAN32Q9NX65 697 aa22.74■■□□□ 1.23
PTPN18-205ENST00000428843 DTLQ9NZJ0 730 aa22.74■■□□□ 1.23
PTPN18-205ENST00000428843 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.74■■□□□ 1.23
PTPN18-205ENST00000428843 MAFKO60675 156 aa22.73■■□□□ 1.23
PTPN18-205ENST00000428843 CST8O60676 142 aa22.73■■□□□ 1.23
PTPN18-205ENST00000428843 PYGMP11217 842 aa22.73■■□□□ 1.23
PTPN18-205ENST00000428843 PTPN5P54829 565 aa22.73■■□□□ 1.23
PTPN18-205ENST00000428843 ADCY2Q08462 1091 aa22.73■■□□□ 1.23
PTPN18-205ENST00000428843 INO80DQ53TQ3 878 aaPredicted RBP22.73■■□□□ 1.23
PTPN18-205ENST00000428843 MEI1Q5TIA1 1274 aa22.73■■□□□ 1.23
PTPN18-205ENST00000428843 AADACL2Q6P093 401 aa22.73■■□□□ 1.23
PTPN18-205ENST00000428843 KIAA1324Q6UXG2 1013 aaKnown RBP22.73■■□□□ 1.23
PTPN18-205ENST00000428843 NPNTQ6UXI9 565 aa22.73■■□□□ 1.23
PTPN18-205ENST00000428843 METTL3Q86U44 580 aaKnown RBP22.73■■□□□ 1.23
PTPN18-205ENST00000428843 UBE2Q2Q8WVN8 375 aa22.73■■□□□ 1.23
PTPN18-205ENST00000428843 ISG20Q96AZ6 181 aaKnown RBP22.73■■□□□ 1.23
PTPN18-205ENST00000428843 RSPH9Q9H1X1 276 aaPredicted RBP22.73■■□□□ 1.23
PTPN18-205ENST00000428843 HEY1Q9Y5J3 304 aa22.73■■□□□ 1.23
PTPN18-205ENST00000428843 FANCMQ8IYD8 2048 aa22.72■■□□□ 1.23
PTPN18-205ENST00000428843 GARSP41250 739 aaKnown RBP22.72■■□□□ 1.23
PTPN18-205ENST00000428843 RPS14P62263 151 aaKnown RBP22.72■■□□□ 1.23
PTPN18-205ENST00000428843 ZNF211Q13398 564 aaPredicted RBP22.72■■□□□ 1.23
PTPN18-205ENST00000428843 ELAVL3Q14576 367 aaKnown RBP22.72■■□□□ 1.23
PTPN18-205ENST00000428843 CYTH1Q15438 398 aa22.72■■□□□ 1.23
PTPN18-205ENST00000428843 DCAF12L1Q5VU92 463 aa22.72■■□□□ 1.23
PTPN18-205ENST00000428843 CACUL1Q86Y37 369 aa22.72■■□□□ 1.23
PTPN18-205ENST00000428843 LRRC49Q8IUZ0 686 aa22.72■■□□□ 1.23
PTPN18-205ENST00000428843 ZBTB44Q8NCP5 570 aa22.72■■□□□ 1.23
PTPN18-205ENST00000428843 OR2A12Q8NGT7 310 aa22.72■■□□□ 1.23
PTPN18-205ENST00000428843 PRCCQ92733 491 aaPredicted RBP22.72■■□□□ 1.23
PTPN18-205ENST00000428843 SIPA1Q96FS4 1042 aa22.72■■□□□ 1.23
PTPN18-205ENST00000428843 HEMGNQ9BXL5 484 aa22.72■■□□□ 1.23
PTPN18-205ENST00000428843 TM6SF2Q9BZW4 377 aa22.72■■□□□ 1.23
PTPN18-205ENST00000428843 USP27XA6NNY8 438 aa22.71■■□□□ 1.23
PTPN18-205ENST00000428843 MX2P20592 715 aa22.71■■□□□ 1.23
PTPN18-205ENST00000428843 PTPN7P35236 360 aa22.71■■□□□ 1.23
PTPN18-205ENST00000428843 CARD16Q5EG05 197 aa22.71■■□□□ 1.23
PTPN18-205ENST00000428843 ZNF776Q68DI1 518 aaPredicted RBP22.71■■□□□ 1.23
PTPN18-205ENST00000428843 OR8D1Q8WZ84 308 aa22.71■■□□□ 1.23
PTPN18-205ENST00000428843 CCDC114Q96M63 670 aa22.71■■□□□ 1.23
PTPN18-205ENST00000428843 HERPUD2Q9BSE4 406 aa22.71■■□□□ 1.23
PTPN18-205ENST00000428843 OSBPL8Q9BZF1 889 aa22.71■■□□□ 1.23
PTPN18-205ENST00000428843 FARP1Q9Y4F1 1045 aaPredicted RBP22.71■■□□□ 1.23
PTPN18-205ENST00000428843 PCDHGA2Q9Y5H1 932 aa22.71■■□□□ 1.23
PTPN18-205ENST00000428843 MCF2LO15068 1137 aa22.7■■□□□ 1.22
PTPN18-205ENST00000428843 RNASEH1O60930 286 aaKnown RBP22.7■■□□□ 1.22
PTPN18-205ENST00000428843 PEX11BO96011 259 aa22.7■■□□□ 1.22
PTPN18-205ENST00000428843 C7P10643 843 aa22.7■■□□□ 1.22
PTPN18-205ENST00000428843 TGM2P21980 687 aa22.7■■□□□ 1.22
PTPN18-205ENST00000428843 CETN2P41208 172 aa22.7■■□□□ 1.22
PTPN18-205ENST00000428843 RECQLP46063 649 aaPredicted RBP22.7■■□□□ 1.22
PTPN18-205ENST00000428843 RHOAP61586 193 aa22.7■■□□□ 1.22
PTPN18-205ENST00000428843 RFTN1Q14699 578 aaPredicted RBP22.7■■□□□ 1.22
PTPN18-205ENST00000428843 RPS6KA1Q15418 735 aa22.7■■□□□ 1.22
PTPN18-205ENST00000428843 TMCO4Q5TGY1 634 aa22.7■■□□□ 1.22
PTPN18-205ENST00000428843 DPY19L3Q6ZPD9 716 aa22.7■■□□□ 1.22
PTPN18-205ENST00000428843 BBS12Q6ZW61 710 aa22.7■■□□□ 1.22
PTPN18-205ENST00000428843 MMAAQ8IVH4 418 aaKnown RBP22.7■■□□□ 1.22
PTPN18-205ENST00000428843 CHST14Q8NCH0 376 aa22.7■■□□□ 1.22
PTPN18-205ENST00000428843 LRRN4Q8WUT4 740 aa22.7■■□□□ 1.22
PTPN18-205ENST00000428843 ZNF599Q96NL3 588 aa22.7■■□□□ 1.22
PTPN18-205ENST00000428843 IRF2BPLQ9H1B7 796 aa22.7■■□□□ 1.22
PTPN18-205ENST00000428843 SAE1Q9UBE0 346 aaPredicted RBP22.7■■□□□ 1.22
PTPN18-205ENST00000428843 LHX3Q9UBR4 397 aa22.7■■□□□ 1.22
PTPN18-205ENST00000428843 RAPGEFL1Q9UHV5 662 aa22.7■■□□□ 1.22
PTPN18-205ENST00000428843 EFR3BQ9Y2G0 817 aa22.7■■□□□ 1.22
PTPN18-205ENST00000428843 ALOX15BO15296 676 aa22.69■■□□□ 1.22
PTPN18-205ENST00000428843 GSRP00390 522 aa22.69■■□□□ 1.22
PTPN18-205ENST00000428843 PECAM1P16284 738 aaPredicted RBP22.69■■□□□ 1.22
PTPN18-205ENST00000428843 SNRPD1P62314 119 aaKnown RBP22.69■■□□□ 1.22
PTPN18-205ENST00000428843 SRSF5Q13243 272 aaKnown RBP22.69■■□□□ 1.22
PTPN18-205ENST00000428843 LBRQ14739 615 aaKnown RBP22.69■■□□□ 1.22
PTPN18-205ENST00000428843 ATXN7L2Q5T6C5 722 aaPredicted RBP22.69■■□□□ 1.22
PTPN18-205ENST00000428843 PLPP6Q8IY26 295 aa22.69■■□□□ 1.22
PTPN18-205ENST00000428843 OR2AP1Q8NGE2 309 aa22.69■■□□□ 1.22
PTPN18-205ENST00000428843 RLN3Q8WXF3 142 aa22.69■■□□□ 1.22
PTPN18-205ENST00000428843 HDAC11Q96DB2 347 aa22.69■■□□□ 1.22
PTPN18-205ENST00000428843 TSGA13Q96PP4 275 aa22.69■■□□□ 1.22
PTPN18-205ENST00000428843 CD93Q9NPY3 652 aa22.69■■□□□ 1.22
PTPN18-205ENST00000428843 INVSQ9Y283 1065 aa22.69■■□□□ 1.22
PTPN18-205ENST00000428843 R4GN57 208 aa22.69■■□□□ 1.22
PTPN18-205ENST00000428843 PLXND1Q9Y4D7 1925 aa22.69■■□□□ 1.22
PTPN18-205ENST00000428843 LILRB5O75023 590 aa22.68■■□□□ 1.22
PTPN18-205ENST00000428843 IL1BP01584 269 aa22.68■■□□□ 1.22
PTPN18-205ENST00000428843 DNTTP04053 509 aa22.68■■□□□ 1.22
PTPN18-205ENST00000428843 CTSLP07711 333 aa22.68■■□□□ 1.22
PTPN18-205ENST00000428843 ACADMP11310 421 aa22.68■■□□□ 1.22
PTPN18-205ENST00000428843 CCNCP24863 283 aa22.68■■□□□ 1.22
PTPN18-205ENST00000428843 CHRNA3P32297 505 aa22.68■■□□□ 1.22
PTPN18-205ENST00000428843 PSMD8P48556 350 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms