RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 DOCK4Q8N1I0 1966 aa16.92■□□□□ 0.3
VARS-216ENST00000428445 RAD51BO15315 384 aa16.92■□□□□ 0.3
VARS-216ENST00000428445 SRGAP2O75044 1071 aa16.92■□□□□ 0.3
VARS-216ENST00000428445 ZNF821O75541 412 aaPredicted RBP16.92■□□□□ 0.3
VARS-216ENST00000428445 LEFTY1O75610 366 aa16.92■□□□□ 0.3
VARS-216ENST00000428445 PIAS2O75928 621 aa16.92■□□□□ 0.3
VARS-216ENST00000428445 MPOP05164 745 aa16.92■□□□□ 0.3
VARS-216ENST00000428445 NUDT1P36639 197 aa16.92■□□□□ 0.3
VARS-216ENST00000428445 CXCR3P49682 368 aa16.92■□□□□ 0.3
VARS-216ENST00000428445 PTK2Q05397 1052 aa16.92■□□□□ 0.3
VARS-216ENST00000428445 MAPK8IP2Q13387 824 aaPredicted RBP16.92■□□□□ 0.3
VARS-216ENST00000428445 RAB6CQ53S08 254 aa16.92■□□□□ 0.3
VARS-216ENST00000428445 TRNP1Q6NT89 227 aa16.92■□□□□ 0.3
VARS-216ENST00000428445 Q6ZSR6 202 aa16.92■□□□□ 0.3
VARS-216ENST00000428445 ERN2Q76MJ5 926 aaKnown RBP16.92■□□□□ 0.3
VARS-216ENST00000428445 ERICH1Q86X53 443 aa16.92■□□□□ 0.3
VARS-216ENST00000428445 SPACA3Q8IXA5 215 aa16.92■□□□□ 0.3
VARS-216ENST00000428445 TMIEQ8NEW7 156 aa16.92■□□□□ 0.3
VARS-216ENST00000428445 OR4C6Q8NH72 309 aa16.92■□□□□ 0.3
VARS-216ENST00000428445 SNIP1Q8TAD8 396 aaKnown RBP16.92■□□□□ 0.3
VARS-216ENST00000428445 RAB6CQ9H0N0 254 aa16.92■□□□□ 0.3
VARS-216ENST00000428445 IL36AQ9UHA7 158 aa16.92■□□□□ 0.3
VARS-216ENST00000428445 FARP1Q9Y4F1 1045 aaPredicted RBP16.92■□□□□ 0.3
VARS-216ENST00000428445 KALRNO60229 2985 aa16.91■□□□□ 0.3
VARS-216ENST00000428445 LY6G6EA0A0G2JKS1 128 aa16.91■□□□□ 0.3
VARS-216ENST00000428445 POM121BA6NF01 834 aa16.91■□□□□ 0.3
VARS-216ENST00000428445 DRGXA6NNA5 263 aa16.91■□□□□ 0.3
VARS-216ENST00000428445 CASC3O15234 703 aaKnown RBP16.91■□□□□ 0.3
VARS-216ENST00000428445 ATXN7O15265 892 aaPredicted RBP16.91■□□□□ 0.3
VARS-216ENST00000428445 PAK4O96013 591 aaPredicted RBP16.91■□□□□ 0.3
VARS-216ENST00000428445 PRKCSHP14314 528 aaPredicted RBP16.91■□□□□ 0.3
VARS-216ENST00000428445 HNRNPA2B1P22626 353 aaKnown RBP16.91■□□□□ 0.3
VARS-216ENST00000428445 AKT2P31751 481 aa16.91■□□□□ 0.3
VARS-216ENST00000428445 GKP32189 559 aa16.91■□□□□ 0.3
VARS-216ENST00000428445 DNA2P51530 1060 aa16.91■□□□□ 0.3
VARS-216ENST00000428445 CXADRP78310 365 aa16.91■□□□□ 0.3
VARS-216ENST00000428445 E2F1Q01094 437 aa16.91■□□□□ 0.3
VARS-216ENST00000428445 TLE3Q04726 772 aa16.91■□□□□ 0.3
VARS-216ENST00000428445 DEUP1Q05D60 604 aa16.91■□□□□ 0.3
VARS-216ENST00000428445 C19orf57Q0VDD7 668 aa16.91■□□□□ 0.3
VARS-216ENST00000428445 TBC1D25Q3MII6 688 aa16.91■□□□□ 0.3
VARS-216ENST00000428445 C22orf39Q6P5X5 142 aa16.91■□□□□ 0.3
VARS-216ENST00000428445 PCSK4Q6UW60 755 aa16.91■□□□□ 0.3
VARS-216ENST00000428445 ZNF397Q8NF99 534 aaPredicted RBP16.91■□□□□ 0.3
VARS-216ENST00000428445 BAP1Q92560 729 aa16.91■□□□□ 0.3
VARS-216ENST00000428445 APOLD1Q96LR9 279 aa16.91■□□□□ 0.3
VARS-216ENST00000428445 C2orf49Q9BVC5 232 aaPredicted RBP16.91■□□□□ 0.3
VARS-216ENST00000428445 DYRK4Q9NR20 520 aa16.91■□□□□ 0.3
VARS-216ENST00000428445 TMEM51Q9NW97 253 aa16.91■□□□□ 0.3
VARS-216ENST00000428445 DNAJC28Q9NX36 388 aa16.91■□□□□ 0.3
VARS-216ENST00000428445 RWDD2AQ9UIY3 292 aa16.91■□□□□ 0.3
VARS-216ENST00000428445 WASF2Q9Y6W5 498 aa16.91■□□□□ 0.3
VARS-216ENST00000428445 U3KQA8 63 aa16.91■□□□□ 0.3
VARS-216ENST00000428445 OPA1O60313 960 aa16.9■□□□□ 0.3
VARS-216ENST00000428445 OR1E1P30953 314 aa16.9■□□□□ 0.3
VARS-216ENST00000428445 ACTN2P35609 894 aa16.9■□□□□ 0.3
VARS-216ENST00000428445 MTIF2P46199 727 aaKnown RBP16.9■□□□□ 0.3
VARS-216ENST00000428445 SNX16P57768 344 aa16.9■□□□□ 0.3
VARS-216ENST00000428445 HSP90AA4PQ58FG1 418 aa16.9■□□□□ 0.3
VARS-216ENST00000428445 TPRG1LQ5T0D9 272 aa16.9■□□□□ 0.3
VARS-216ENST00000428445 TAF3Q5VWG9 929 aa16.9■□□□□ 0.3
VARS-216ENST00000428445 CDCP2Q5VXM1 449 aa16.9■□□□□ 0.3
VARS-216ENST00000428445 DPY19L2P1Q6NXN4 242 aa16.9■□□□□ 0.3
VARS-216ENST00000428445 NEK5Q6P3R8 708 aa16.9■□□□□ 0.3
VARS-216ENST00000428445 PTAR1Q7Z6K3 402 aaPredicted RBP16.9■□□□□ 0.3
VARS-216ENST00000428445 MAGEB5Q9BZ81 275 aa16.9■□□□□ 0.3
VARS-216ENST00000428445 KLF15Q9UIH9 416 aa16.9■□□□□ 0.3
VARS-216ENST00000428445 FCF1Q9Y324 198 aaKnown RBP16.9■□□□□ 0.3
VARS-216ENST00000428445 GOLGA8SH3BPF8 625 aa16.89■□□□□ 0.29
VARS-216ENST00000428445 K7ESM1 405 aa16.89■□□□□ 0.29
VARS-216ENST00000428445 USP12O75317 370 aa16.89■□□□□ 0.29
VARS-216ENST00000428445 ZMPSTE24O75844 475 aa16.89■□□□□ 0.29
VARS-216ENST00000428445 PRNPP04156 253 aa16.89■□□□□ 0.29
VARS-216ENST00000428445 CKMT1AP12532 417 aa16.89■□□□□ 0.29
VARS-216ENST00000428445 FLT3P36888 993 aa16.89■□□□□ 0.29
VARS-216ENST00000428445 FZD2Q14332 565 aa16.89■□□□□ 0.29
VARS-216ENST00000428445 TMEM259Q4ZIN3 620 aa16.89■□□□□ 0.29
VARS-216ENST00000428445 HS1BP3Q53T59 392 aa16.89■□□□□ 0.29
VARS-216ENST00000428445 BRMS1LQ5PSV4 323 aa16.89■□□□□ 0.29
VARS-216ENST00000428445 LEKR1Q6ZMV7 388 aa16.89■□□□□ 0.29
VARS-216ENST00000428445 GPR155Q7Z3F1 870 aa16.89■□□□□ 0.29
VARS-216ENST00000428445 ABI3BPQ7Z7G0 1075 aa16.89■□□□□ 0.29
VARS-216ENST00000428445 PHLDB2Q86SQ0 1253 aa16.89■□□□□ 0.29
VARS-216ENST00000428445 SETD3Q86TU7 594 aaPredicted RBP16.89■□□□□ 0.29
VARS-216ENST00000428445 CACTIN-AS1Q8N1I8 211 aa16.89■□□□□ 0.29
VARS-216ENST00000428445 DCAF4L2Q8NA75 395 aa16.89■□□□□ 0.29
VARS-216ENST00000428445 OR6K2Q8NGY2 324 aa16.89■□□□□ 0.29
VARS-216ENST00000428445 NT5C3BQ969T7 300 aa16.89■□□□□ 0.29
VARS-216ENST00000428445 HDAC8Q9BY41 377 aa16.89■□□□□ 0.29
VARS-216ENST00000428445 SLC17A9Q9BYT1 436 aa16.89■□□□□ 0.29
VARS-216ENST00000428445 CPNE5Q9HCH3 593 aa16.89■□□□□ 0.29
VARS-216ENST00000428445 ZNF212Q9UDV6 495 aa16.89■□□□□ 0.29
VARS-216ENST00000428445 GGT7Q9UJ14 662 aa16.89■□□□□ 0.29
VARS-216ENST00000428445 ATMQ13315 3056 aa16.89■□□□□ 0.29
VARS-216ENST00000428445 KIF26BQ2KJY2 2108 aa16.88■□□□□ 0.29
VARS-216ENST00000428445 GTPBP10A4D1E9 387 aaKnown RBP16.88■□□□□ 0.29
VARS-216ENST00000428445 CSO75390 466 aaKnown RBP16.88■□□□□ 0.29
VARS-216ENST00000428445 CD160O95971 181 aa16.88■□□□□ 0.29
VARS-216ENST00000428445 ACVRL1P37023 503 aa16.88■□□□□ 0.29
VARS-216ENST00000428445 GABREP78334 506 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms