RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 TBX20Q9UMR3 447 aa16.33■□□□□ 0.2
C9orf3-206ENST00000428313 CDYLQ9Y232 598 aa16.33■□□□□ 0.2
C9orf3-206ENST00000428313 VWA5AO00534 786 aa16.32■□□□□ 0.2
C9orf3-206ENST00000428313 NEMP1O14524 444 aa16.32■□□□□ 0.2
C9orf3-206ENST00000428313 HLA-DRAP01903 254 aa16.32■□□□□ 0.2
C9orf3-206ENST00000428313 POLR2IP36954 125 aaKnown RBP16.32■□□□□ 0.2
C9orf3-206ENST00000428313 RPL14P50914 215 aaKnown RBP16.32■□□□□ 0.2
C9orf3-206ENST00000428313 AASDHQ4L235 1098 aaPredicted RBP16.32■□□□□ 0.2
C9orf3-206ENST00000428313 CCDC58Q4VC31 144 aa16.32■□□□□ 0.2
C9orf3-206ENST00000428313 C6orf10Q5SRN2 563 aa16.32■□□□□ 0.2
C9orf3-206ENST00000428313 KCNT2Q6UVM3 1135 aa16.32■□□□□ 0.2
C9orf3-206ENST00000428313 SLC22A16Q86VW1 577 aa16.32■□□□□ 0.2
C9orf3-206ENST00000428313 SIX5Q8N196 739 aa16.32■□□□□ 0.2
C9orf3-206ENST00000428313 CLIP4Q8N3C7 705 aa16.32■□□□□ 0.2
C9orf3-206ENST00000428313 DHRSXQ8N5I4 330 aa16.32■□□□□ 0.2
C9orf3-206ENST00000428313 KCTD6Q8NC69 237 aa16.32■□□□□ 0.2
C9orf3-206ENST00000428313 OR2T34Q8NGX1 318 aa16.32■□□□□ 0.2
C9orf3-206ENST00000428313 OR2T3Q8NH03 318 aa16.32■□□□□ 0.2
C9orf3-206ENST00000428313 CDKL2Q92772 493 aa16.32■□□□□ 0.2
C9orf3-206ENST00000428313 FBXL20Q96IG2 436 aa16.32■□□□□ 0.2
C9orf3-206ENST00000428313 ZNF518BQ9C0D4 1074 aa16.32■□□□□ 0.2
C9orf3-206ENST00000428313 VPS33BQ9H267 617 aa16.32■□□□□ 0.2
C9orf3-206ENST00000428313 CCM2LQ9NUG4 571 aaPredicted RBP16.32■□□□□ 0.2
C9orf3-206ENST00000428313 MRGBPQ9NV56 204 aa16.32■□□□□ 0.2
C9orf3-206ENST00000428313 MTRRQ9UBK8 725 aa16.32■□□□□ 0.2
C9orf3-206ENST00000428313 TRIM13O60858 407 aa16.31■□□□□ 0.2
C9orf3-206ENST00000428313 STAM2O75886 525 aa16.31■□□□□ 0.2
C9orf3-206ENST00000428313 PRKCAP17252 672 aa16.31■□□□□ 0.2
C9orf3-206ENST00000428313 AP3M2P53677 418 aa16.31■□□□□ 0.2
C9orf3-206ENST00000428313 PHC1P78364 1004 aa16.31■□□□□ 0.2
C9orf3-206ENST00000428313 PDK2Q15119 407 aa16.31■□□□□ 0.2
C9orf3-206ENST00000428313 RNF19BQ6ZMZ0 732 aa16.31■□□□□ 0.2
C9orf3-206ENST00000428313 RAVER1Q8IY67 606 aaKnown RBP16.31■□□□□ 0.2
C9orf3-206ENST00000428313 LSMEM2Q8N112 164 aa16.31■□□□□ 0.2
C9orf3-206ENST00000428313 GOLM1Q8NBJ4 401 aa16.31■□□□□ 0.2
C9orf3-206ENST00000428313 ZNF280CQ8ND82 737 aa16.31■□□□□ 0.2
C9orf3-206ENST00000428313 BPIFB6Q8NFQ5 453 aa16.31■□□□□ 0.2
C9orf3-206ENST00000428313 TEKT3Q9BXF9 490 aa16.31■□□□□ 0.2
C9orf3-206ENST00000428313 AGPAT4Q9NRZ5 378 aa16.31■□□□□ 0.2
C9orf3-206ENST00000428313 TRPC5Q9UL62 973 aaPredicted RBP16.31■□□□□ 0.2
C9orf3-206ENST00000428313 RABL2BQ9UNT1 228 aa16.31■□□□□ 0.2
C9orf3-206ENST00000428313 AURKAO14965 403 aa16.31■□□□□ 0.2
C9orf3-206ENST00000428313 TEX28O15482 410 aa16.31■□□□□ 0.2
C9orf3-206ENST00000428313 ABCB7O75027 752 aa16.31■□□□□ 0.2
C9orf3-206ENST00000428313 BCAS1O75363 584 aaPredicted RBP16.31■□□□□ 0.2
C9orf3-206ENST00000428313 TPSB2P20231 275 aa16.31■□□□□ 0.2
C9orf3-206ENST00000428313 TBXAS1P24557 533 aaPredicted RBP16.31■□□□□ 0.2
C9orf3-206ENST00000428313 GNG2P59768 71 aa16.31■□□□□ 0.2
C9orf3-206ENST00000428313 CLDN10P78369 228 aa16.31■□□□□ 0.2
C9orf3-206ENST00000428313 STX5Q13190 355 aa16.31■□□□□ 0.2
C9orf3-206ENST00000428313 SELPLGQ14242 412 aa16.31■□□□□ 0.2
C9orf3-206ENST00000428313 SNX17Q15036 470 aa16.31■□□□□ 0.2
C9orf3-206ENST00000428313 TPSAB1Q15661 275 aa16.31■□□□□ 0.2
C9orf3-206ENST00000428313 KCNT1Q5JUK3 1230 aa16.31■□□□□ 0.2
C9orf3-206ENST00000428313 SAMD4BQ5PRF9 694 aaKnown RBP16.31■□□□□ 0.2
C9orf3-206ENST00000428313 XAF1Q6GPH4 301 aa16.31■□□□□ 0.2
C9orf3-206ENST00000428313 ZNF534Q76KX8 674 aa16.31■□□□□ 0.2
C9orf3-206ENST00000428313 DHFR2Q86XF0 187 aa16.31■□□□□ 0.2
C9orf3-206ENST00000428313 GPD1LQ8N335 351 aa16.31■□□□□ 0.2
C9orf3-206ENST00000428313 ZCCHC7Q8N3Z6 543 aaKnown RBP16.31■□□□□ 0.2
C9orf3-206ENST00000428313 ARFGAP1Q8N6T3 406 aa16.31■□□□□ 0.2
C9orf3-206ENST00000428313 PIK3C3Q8NEB9 887 aa16.31■□□□□ 0.2
C9orf3-206ENST00000428313 ZNF606Q8WXB4 792 aa16.31■□□□□ 0.2
C9orf3-206ENST00000428313 PGBD4Q96DM1 585 aa16.31■□□□□ 0.2
C9orf3-206ENST00000428313 SLC45A3Q96JT2 553 aa16.31■□□□□ 0.2
C9orf3-206ENST00000428313 LHPPQ9H008 270 aa16.31■□□□□ 0.2
C9orf3-206ENST00000428313 SPAG4Q9NPE6 437 aa16.31■□□□□ 0.2
C9orf3-206ENST00000428313 PKD2L1Q9P0L9 805 aa16.31■□□□□ 0.2
C9orf3-206ENST00000428313 AGO2Q9UKV8 859 aaKnown RBP16.31■□□□□ 0.2
C9orf3-206ENST00000428313 COPG1Q9Y678 874 aaKnown RBP16.31■□□□□ 0.2
C9orf3-206ENST00000428313 GAKO14976 1311 aa16.31■□□□□ 0.2
C9orf3-206ENST00000428313 ISPDA4D126 451 aa16.3■□□□□ 0.2
C9orf3-206ENST00000428313 G3V2L1 256 aa16.3■□□□□ 0.2
C9orf3-206ENST00000428313 H7C0C1 242 aa16.3■□□□□ 0.2
C9orf3-206ENST00000428313 APRTP07741 180 aa16.3■□□□□ 0.2
C9orf3-206ENST00000428313 GSTM2P28161 218 aa16.3■□□□□ 0.2
C9orf3-206ENST00000428313 HOXA13P31271 388 aaPredicted RBP16.3■□□□□ 0.2
C9orf3-206ENST00000428313 PTPN9P43378 593 aa16.3■□□□□ 0.2
C9orf3-206ENST00000428313 ATP5OP48047 213 aa16.3■□□□□ 0.2
C9orf3-206ENST00000428313 AQP6Q13520 282 aa16.3■□□□□ 0.2
C9orf3-206ENST00000428313 CBX2Q14781 532 aaPredicted RBP16.3■□□□□ 0.2
C9orf3-206ENST00000428313 ARHGEF6Q15052 776 aa16.3■□□□□ 0.2
C9orf3-206ENST00000428313 MAPRE2Q15555 327 aa16.3■□□□□ 0.2
C9orf3-206ENST00000428313 ZACNQ401N2 412 aa16.3■□□□□ 0.2
C9orf3-206ENST00000428313 TMTC4Q5T4D3 741 aa16.3■□□□□ 0.2
C9orf3-206ENST00000428313 LMBRD2Q68DH5 695 aaPredicted RBP16.3■□□□□ 0.2
C9orf3-206ENST00000428313 TMEM35BQ8NCS4 154 aa16.3■□□□□ 0.2
C9orf3-206ENST00000428313 ZNF516Q92618 1163 aa16.3■□□□□ 0.2
C9orf3-206ENST00000428313 ISL2Q96A47 359 aa16.3■□□□□ 0.2
C9orf3-206ENST00000428313 FKBP10Q96AY3 582 aa16.3■□□□□ 0.2
C9orf3-206ENST00000428313 BCL7BQ9BQE9 202 aa16.3■□□□□ 0.2
C9orf3-206ENST00000428313 SLC38A10Q9HBR0 1119 aa16.3■□□□□ 0.2
C9orf3-206ENST00000428313 ARHGAP28Q9P2N2 729 aa16.3■□□□□ 0.2
C9orf3-206ENST00000428313 ZNF229Q9UJW7 825 aa16.3■□□□□ 0.2
C9orf3-206ENST00000428313 PTPRFP10586 1907 aa16.3■□□□□ 0.2
C9orf3-206ENST00000428313 RNF103-CHMP3A0A140T963 221 aa16.3■□□□□ 0.2
C9orf3-206ENST00000428313 PRORSD1PA6NEY8 169 aa16.3■□□□□ 0.2
C9orf3-206ENST00000428313 GRID2O43424 1007 aa16.3■□□□□ 0.2
C9orf3-206ENST00000428313 MPSTP25325 297 aa16.3■□□□□ 0.2
C9orf3-206ENST00000428313 TYK2P29597 1187 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms