RNA–Protein interactions for RNA: ENST00000428017.5

VARS2-203, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 1,103 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-203ENST00000428017 MCF2LO15068 1137 aa15.42■□□□□ 0.06
VARS2-203ENST00000428017 SMAD6O43541 496 aaKnown RBP15.42■□□□□ 0.06
VARS2-203ENST00000428017 MAFKO60675 156 aa15.42■□□□□ 0.06
VARS2-203ENST00000428017 RNASEH1O60930 286 aaKnown RBP15.42■□□□□ 0.06
VARS2-203ENST00000428017 CHRM1P11229 460 aaPredicted RBP15.42■□□□□ 0.06
VARS2-203ENST00000428017 PECAM1P16284 738 aaPredicted RBP15.42■□□□□ 0.06
VARS2-203ENST00000428017 TCP1P17987 556 aaKnown RBP15.42■□□□□ 0.06
VARS2-203ENST00000428017 ATP5OP48047 213 aa15.42■□□□□ 0.06
VARS2-203ENST00000428017 RENBPP51606 427 aa15.42■□□□□ 0.06
VARS2-203ENST00000428017 SNRPD1P62314 119 aaKnown RBP15.42■□□□□ 0.06
VARS2-203ENST00000428017 ETF1P62495 437 aaKnown RBP15.42■□□□□ 0.06
VARS2-203ENST00000428017 SATB1Q01826 763 aa15.42■□□□□ 0.06
VARS2-203ENST00000428017 ZNF33AQ06730 810 aa15.42■□□□□ 0.06
VARS2-203ENST00000428017 LBRQ14739 615 aaKnown RBP15.42■□□□□ 0.06
VARS2-203ENST00000428017 LONRF2Q1L5Z9 754 aa15.42■□□□□ 0.06
VARS2-203ENST00000428017 MARC1Q5VT66 337 aa15.42■□□□□ 0.06
VARS2-203ENST00000428017 Q6ZVU0 165 aa15.42■□□□□ 0.06
VARS2-203ENST00000428017 DSG4Q86SJ6 1040 aa15.42■□□□□ 0.06
VARS2-203ENST00000428017 SLC13A5Q86YT5 568 aaPredicted RBP15.42■□□□□ 0.06
VARS2-203ENST00000428017 C1orf210Q8IVY1 113 aa15.42■□□□□ 0.06
VARS2-203ENST00000428017 PGBD3Q8N328 593 aa15.42■□□□□ 0.06
VARS2-203ENST00000428017 ACTL9Q8TC94 416 aa15.42■□□□□ 0.06
VARS2-203ENST00000428017 OR8D1Q8WZ84 308 aa15.42■□□□□ 0.06
VARS2-203ENST00000428017 ISG20Q96AZ6 181 aaKnown RBP15.42■□□□□ 0.06
VARS2-203ENST00000428017 ERLEC1Q96DZ1 483 aa15.42■□□□□ 0.06
VARS2-203ENST00000428017 OLFM3Q96PB7 478 aa15.42■□□□□ 0.06
VARS2-203ENST00000428017 WDR24Q96S15 920 aa15.42■□□□□ 0.06
VARS2-203ENST00000428017 NAP1L3Q99457 506 aaPredicted RBP15.42■□□□□ 0.06
VARS2-203ENST00000428017 LGMNQ99538 433 aa15.42■□□□□ 0.06
VARS2-203ENST00000428017 TNKS2Q9H2K2 1166 aa15.42■□□□□ 0.06
VARS2-203ENST00000428017 MTG2Q9H4K7 406 aa15.42■□□□□ 0.06
VARS2-203ENST00000428017 FBRSQ9HAH7 460 aa15.42■□□□□ 0.06
VARS2-203ENST00000428017 PDFQ9HBH1 243 aa15.42■□□□□ 0.06
VARS2-203ENST00000428017 SNX12Q9UMY4 172 aa15.42■□□□□ 0.06
VARS2-203ENST00000428017 HACD1B0YJ81 288 aa15.41■□□□□ 0.06
VARS2-203ENST00000428017 MATN3O15232 486 aa15.41■□□□□ 0.06
VARS2-203ENST00000428017 SIN3BO75182 1162 aa15.41■□□□□ 0.06
VARS2-203ENST00000428017 ZNF189O75820 626 aaPredicted RBP15.41■□□□□ 0.06
VARS2-203ENST00000428017 APBB3O95704 486 aa15.41■□□□□ 0.06
VARS2-203ENST00000428017 FGGP02679 453 aa15.41■□□□□ 0.06
VARS2-203ENST00000428017 CASQ1P31415 396 aa15.41■□□□□ 0.06
VARS2-203ENST00000428017 EIF3EP60228 445 aaKnown RBP15.41■□□□□ 0.06
VARS2-203ENST00000428017 OTUD4Q01804 1114 aaKnown RBP15.41■□□□□ 0.06
VARS2-203ENST00000428017 PPIDQ08752 370 aaKnown RBP15.41■□□□□ 0.06
VARS2-203ENST00000428017 XRCC4Q13426 336 aa15.41■□□□□ 0.06
VARS2-203ENST00000428017 CAMK2GQ13555 558 aaPredicted RBP15.41■□□□□ 0.06
VARS2-203ENST00000428017 HNRNPDQ14103 355 aaKnown RBP15.41■□□□□ 0.06
VARS2-203ENST00000428017 NOMO1Q15155 1222 aa15.41■□□□□ 0.06
VARS2-203ENST00000428017 KIAA1211LQ6NV74 962 aa15.41■□□□□ 0.06
VARS2-203ENST00000428017 TMEM92Q6UXU6 159 aa15.41■□□□□ 0.06
VARS2-203ENST00000428017 ZC3H18Q86VM9 953 aaKnown RBP15.41■□□□□ 0.06
VARS2-203ENST00000428017 CDKL3Q8IVW4 592 aaPredicted RBP15.41■□□□□ 0.06
VARS2-203ENST00000428017 CAMKK1Q8N5S9 505 aa15.41■□□□□ 0.06
VARS2-203ENST00000428017 FRS2Q8WU20 508 aa15.41■□□□□ 0.06
VARS2-203ENST00000428017 GDAP1L1Q96MZ0 367 aa15.41■□□□□ 0.06
VARS2-203ENST00000428017 HHIPQ96QV1 700 aa15.41■□□□□ 0.06
VARS2-203ENST00000428017 OSBPL9Q96SU4 736 aa15.41■□□□□ 0.06
VARS2-203ENST00000428017 HERPUD2Q9BSE4 406 aa15.41■□□□□ 0.06
VARS2-203ENST00000428017 TM6SF2Q9BZW4 377 aa15.41■□□□□ 0.06
VARS2-203ENST00000428017 PRSS16Q9NQE7 514 aa15.41■□□□□ 0.06
VARS2-203ENST00000428017 POLR3BQ9NW08 1133 aaPredicted RBP15.41■□□□□ 0.06
VARS2-203ENST00000428017 SEPT10Q9P0V9 454 aa15.41■□□□□ 0.06
VARS2-203ENST00000428017 ACTL7AQ9Y615 435 aa15.41■□□□□ 0.06
VARS2-203ENST00000428017 A0A1W2PQF6 199 aa15.4■□□□□ 0.06
VARS2-203ENST00000428017 MTSS1O43312 755 aa15.4■□□□□ 0.06
VARS2-203ENST00000428017 CD160O95971 181 aa15.4■□□□□ 0.06
VARS2-203ENST00000428017 IGSF6O95976 241 aa15.4■□□□□ 0.06
VARS2-203ENST00000428017 GSRP00390 522 aa15.4■□□□□ 0.06
VARS2-203ENST00000428017 CCNB1P14635 433 aa15.4■□□□□ 0.06
VARS2-203ENST00000428017 VAV1P15498 845 aa15.4■□□□□ 0.06
VARS2-203ENST00000428017 COL9A1P20849 921 aa15.4■□□□□ 0.06
VARS2-203ENST00000428017 HSPA9P38646 679 aaKnown RBP15.4■□□□□ 0.06
VARS2-203ENST00000428017 MMP13P45452 471 aa15.4■□□□□ 0.06
VARS2-203ENST00000428017 NUBP1P53384 320 aa15.4■□□□□ 0.06
VARS2-203ENST00000428017 RAD51Q06609 339 aa15.4■□□□□ 0.06
VARS2-203ENST00000428017 ITKQ08881 620 aa15.4■□□□□ 0.06
VARS2-203ENST00000428017 SLC10A7Q0GE19 358 aa15.4■□□□□ 0.06
VARS2-203ENST00000428017 ELAVL3Q14576 367 aaKnown RBP15.4■□□□□ 0.06
VARS2-203ENST00000428017 CYTH1Q15438 398 aa15.4■□□□□ 0.06
VARS2-203ENST00000428017 CARD16Q5EG05 197 aa15.4■□□□□ 0.06
VARS2-203ENST00000428017 C9orf64Q5T6V5 341 aa15.4■□□□□ 0.06
VARS2-203ENST00000428017 ANO7Q6IWH7 933 aa15.4■□□□□ 0.06
VARS2-203ENST00000428017 DARS2Q6PI48 645 aaKnown RBP15.4■□□□□ 0.06
VARS2-203ENST00000428017 ADAT2Q7Z6V5 191 aaKnown RBP15.4■□□□□ 0.06
VARS2-203ENST00000428017 STK40Q8N2I9 435 aa15.4■□□□□ 0.06
VARS2-203ENST00000428017 OR2AP1Q8NGE2 309 aa15.4■□□□□ 0.06
VARS2-203ENST00000428017 OR2T3Q8NH03 318 aa15.4■□□□□ 0.06
VARS2-203ENST00000428017 HMGB4Q8WW32 186 aa15.4■□□□□ 0.06
VARS2-203ENST00000428017 PTPRN2Q92932 1015 aa15.4■□□□□ 0.06
VARS2-203ENST00000428017 FATE1Q969F0 183 aa15.4■□□□□ 0.06
VARS2-203ENST00000428017 C16orf45Q96MC5 204 aaPredicted RBP15.4■□□□□ 0.06
VARS2-203ENST00000428017 LRFN3Q9BTN0 628 aa15.4■□□□□ 0.06
VARS2-203ENST00000428017 FRMD8P1Q9BZ68 369 aaPredicted RBP15.4■□□□□ 0.06
VARS2-203ENST00000428017 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.4■□□□□ 0.06
VARS2-203ENST00000428017 HECAQ9UBI9 543 aaPredicted RBP15.4■□□□□ 0.06
VARS2-203ENST00000428017 SAR1BQ9Y6B6 198 aa15.4■□□□□ 0.06
VARS2-203ENST00000428017 MIA3Q5JRA6 1907 aa15.39■□□□□ 0.05
VARS2-203ENST00000428017 DOCK4Q8N1I0 1966 aa15.39■□□□□ 0.05
VARS2-203ENST00000428017 KCNK1O00180 336 aa15.39■□□□□ 0.05
VARS2-203ENST00000428017 CES2O00748 559 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms