RNA–Protein interactions for RNA: ENST00000427563.1

COL9A2-204, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-204ENST00000427563 LEKR1Q6ZMV7 388 aa19.56■□□□□ 0.72
COL9A2-204ENST00000427563 RTL3Q8N8U3 475 aaKnown RBP19.56■□□□□ 0.72
COL9A2-204ENST00000427563 CPLX3Q8WVH0 158 aa19.56■□□□□ 0.72
COL9A2-204ENST00000427563 RETREG1Q9H6L5 497 aa19.56■□□□□ 0.72
COL9A2-204ENST00000427563 GAREM1Q9H706 876 aa19.56■□□□□ 0.72
COL9A2-204ENST00000427563 CNOT8Q9UFF9 292 aaKnown RBP19.56■□□□□ 0.72
COL9A2-204ENST00000427563 CAPN11Q9UMQ6 739 aa19.56■□□□□ 0.72
COL9A2-204ENST00000427563 WASF3Q9UPY6 502 aa19.56■□□□□ 0.72
COL9A2-204ENST00000427563 A0A1W2PR77 199 aa19.55■□□□□ 0.72
COL9A2-204ENST00000427563 LRRC72A6NJI9 287 aa19.55■□□□□ 0.72
COL9A2-204ENST00000427563 WASH4PA8MWX3 477 aa19.55■□□□□ 0.72
COL9A2-204ENST00000427563 C1QTNF3-AMACRE9PGA6 284 aa19.55■□□□□ 0.72
COL9A2-204ENST00000427563 GOLGA6L19H0YKK7 550 aa19.55■□□□□ 0.72
COL9A2-204ENST00000427563 KCNK3O14649 394 aa19.55■□□□□ 0.72
COL9A2-204ENST00000427563 PSMA2P25787 234 aa19.55■□□□□ 0.72
COL9A2-204ENST00000427563 EPHB2P29323 1055 aa19.55■□□□□ 0.72
COL9A2-204ENST00000427563 GRIA4P48058 902 aa19.55■□□□□ 0.72
COL9A2-204ENST00000427563 SFSWAPQ12872 951 aaKnown RBP19.55■□□□□ 0.72
COL9A2-204ENST00000427563 HLA-BQ31612 363 aa19.55■□□□□ 0.72
COL9A2-204ENST00000427563 ARSIQ5FYB1 569 aa19.55■□□□□ 0.72
COL9A2-204ENST00000427563 EFHC2Q5JST6 749 aa19.55■□□□□ 0.72
COL9A2-204ENST00000427563 FAM46CQ5VWP2 391 aa19.55■□□□□ 0.72
COL9A2-204ENST00000427563 RETSATQ6NUM9 610 aa19.55■□□□□ 0.72
COL9A2-204ENST00000427563 PPP1R2P3Q6NXS1 205 aa19.55■□□□□ 0.72
COL9A2-204ENST00000427563 DSG4Q86SJ6 1040 aa19.55■□□□□ 0.72
COL9A2-204ENST00000427563 TMIEQ8NEW7 156 aa19.55■□□□□ 0.72
COL9A2-204ENST00000427563 SYN2Q92777 582 aaPredicted RBP19.55■□□□□ 0.72
COL9A2-204ENST00000427563 ZNF653Q96CK0 615 aa19.55■□□□□ 0.72
COL9A2-204ENST00000427563 XPO4Q9C0E2 1151 aaKnown RBP19.55■□□□□ 0.72
COL9A2-204ENST00000427563 CEP44Q9C0F1 390 aa19.55■□□□□ 0.72
COL9A2-204ENST00000427563 MAGEH1Q9H213 219 aa19.55■□□□□ 0.72
COL9A2-204ENST00000427563 ANKRD6Q9Y2G4 727 aa19.55■□□□□ 0.72
COL9A2-204ENST00000427563 SPAARA0A1B0GVQ0 90 aa19.54■□□□□ 0.72
COL9A2-204ENST00000427563 ANKRD62A6NC57 917 aa19.54■□□□□ 0.72
COL9A2-204ENST00000427563 SLC7A4O43246 635 aa19.54■□□□□ 0.72
COL9A2-204ENST00000427563 CREB3O43889 395 aa19.54■□□□□ 0.72
COL9A2-204ENST00000427563 SH3BP5O60239 455 aa19.54■□□□□ 0.72
COL9A2-204ENST00000427563 TOP3BO95985 862 aaKnown RBP19.54■□□□□ 0.72
COL9A2-204ENST00000427563 CTSKP43235 329 aa19.54■□□□□ 0.72
COL9A2-204ENST00000427563 ZBED6P86452 979 aa19.54■□□□□ 0.72
COL9A2-204ENST00000427563 PCDH20Q8N6Y1 951 aaKnown RBP19.54■□□□□ 0.72
COL9A2-204ENST00000427563 NETO2Q8NC67 525 aa19.54■□□□□ 0.72
COL9A2-204ENST00000427563 GRIN3AQ8TCU5 1115 aa19.54■□□□□ 0.72
COL9A2-204ENST00000427563 SNRNP25Q9BV90 132 aaKnown RBP19.54■□□□□ 0.72
COL9A2-204ENST00000427563 MYO1AQ9UBC5 1043 aa19.54■□□□□ 0.72
COL9A2-204ENST00000427563 IL36AQ9UHA7 158 aa19.54■□□□□ 0.72
COL9A2-204ENST00000427563 NENFQ9UMX5 172 aa19.54■□□□□ 0.72
COL9A2-204ENST00000427563 TBC1D3DA0A087WVF3 549 aa19.53■□□□□ 0.72
COL9A2-204ENST00000427563 TBC1D3IA0A087WXS9 549 aa19.53■□□□□ 0.72
COL9A2-204ENST00000427563 TBC1D3EA0A087X179 549 aa19.53■□□□□ 0.72
COL9A2-204ENST00000427563 TBC1D3KA0A087X1G2 549 aa19.53■□□□□ 0.72
COL9A2-204ENST00000427563 TBC1D3FA6NER0 549 aaPredicted RBP19.53■□□□□ 0.72
COL9A2-204ENST00000427563 TBC1D3LB9A6J9 549 aa19.53■□□□□ 0.72
COL9A2-204ENST00000427563 RAMP2O60895 175 aa19.53■□□□□ 0.72
COL9A2-204ENST00000427563 LRCH4O75427 683 aa19.53■□□□□ 0.72
COL9A2-204ENST00000427563 LEFTY1O75610 366 aa19.53■□□□□ 0.72
COL9A2-204ENST00000427563 TBC1D3HP0C7X1 549 aa19.53■□□□□ 0.72
COL9A2-204ENST00000427563 TCF4P15884 667 aa19.53■□□□□ 0.72
COL9A2-204ENST00000427563 GKP32189 559 aa19.53■□□□□ 0.72
COL9A2-204ENST00000427563 CCNHP51946 323 aaPredicted RBP19.53■□□□□ 0.72
COL9A2-204ENST00000427563 AIF1P55008 147 aa19.53■□□□□ 0.72
COL9A2-204ENST00000427563 RACK1P63244 317 aaKnown RBP19.53■□□□□ 0.72
COL9A2-204ENST00000427563 SLC20A2Q08357 652 aa19.53■□□□□ 0.72
COL9A2-204ENST00000427563 SLC14A1Q13336 389 aa19.53■□□□□ 0.72
COL9A2-204ENST00000427563 POLD3Q15054 466 aaPredicted RBP19.53■□□□□ 0.72
COL9A2-204ENST00000427563 TDRD12Q587J7 1177 aaKnown RBP19.53■□□□□ 0.72
COL9A2-204ENST00000427563 TBC1D3GQ6DHY5 549 aa19.53■□□□□ 0.72
COL9A2-204ENST00000427563 TBC1D3CQ6IPX1 549 aa19.53■□□□□ 0.72
COL9A2-204ENST00000427563 TBC1D3Q8IZP1 549 aaPredicted RBP19.53■□□□□ 0.72
COL9A2-204ENST00000427563 FNIP1Q8TF40 1166 aa19.53■□□□□ 0.72
COL9A2-204ENST00000427563 HMCESQ96FZ2 354 aa19.53■□□□□ 0.72
COL9A2-204ENST00000427563 KCTD15Q96SI1 283 aaPredicted RBP19.53■□□□□ 0.72
COL9A2-204ENST00000427563 TM6SF2Q9BZW4 377 aa19.53■□□□□ 0.72
COL9A2-204ENST00000427563 KDM4CQ9H3R0 1056 aa19.53■□□□□ 0.72
COL9A2-204ENST00000427563 PCSK1NQ9UHG2 260 aa19.53■□□□□ 0.72
COL9A2-204ENST00000427563 AP4E1Q9UPM8 1137 aa19.53■□□□□ 0.72
COL9A2-204ENST00000427563 A0A087X0T9 212 aa19.52■□□□□ 0.72
COL9A2-204ENST00000427563 CXorf51AA0A1B0GTR3 108 aa19.52■□□□□ 0.72
COL9A2-204ENST00000427563 H0Y8X5 98 aa19.52■□□□□ 0.72
COL9A2-204ENST00000427563 KPNA3O00505 521 aaPredicted RBP19.52■□□□□ 0.72
COL9A2-204ENST00000427563 VILLO15195 856 aa19.52■□□□□ 0.72
COL9A2-204ENST00000427563 KDELR3O43731 214 aa19.52■□□□□ 0.72
COL9A2-204ENST00000427563 CBFA2T3O75081 653 aa19.52■□□□□ 0.72
COL9A2-204ENST00000427563 SERPING1P05155 500 aa19.52■□□□□ 0.72
COL9A2-204ENST00000427563 FAM228BP0C875 321 aa19.52■□□□□ 0.72
COL9A2-204ENST00000427563 MIPP30301 263 aa19.52■□□□□ 0.72
COL9A2-204ENST00000427563 MAT2AP31153 395 aaKnown RBP19.52■□□□□ 0.72
COL9A2-204ENST00000427563 ZNF423Q2M1K9 1284 aa19.52■□□□□ 0.72
COL9A2-204ENST00000427563 CARD16Q5EG05 197 aa19.52■□□□□ 0.72
COL9A2-204ENST00000427563 DBX2Q6ZNG2 339 aa19.52■□□□□ 0.72
COL9A2-204ENST00000427563 TRIM69Q86WT6 500 aa19.52■□□□□ 0.72
COL9A2-204ENST00000427563 OR6K2Q8NGY2 324 aa19.52■□□□□ 0.72
COL9A2-204ENST00000427563 EPAS1Q99814 870 aa19.52■□□□□ 0.72
COL9A2-204ENST00000427563 THAP2Q9H0W7 228 aa19.52■□□□□ 0.72
COL9A2-204ENST00000427563 TSPY26PQ9H489 355 aa19.52■□□□□ 0.72
COL9A2-204ENST00000427563 LRRC19Q9H756 370 aa19.52■□□□□ 0.72
COL9A2-204ENST00000427563 TM7SF3Q9NS93 570 aa19.52■□□□□ 0.72
COL9A2-204ENST00000427563 RASA4BC9J798 803 aa19.51■□□□□ 0.71
COL9A2-204ENST00000427563 RASA4O43374 803 aa19.51■□□□□ 0.71
COL9A2-204ENST00000427563 CER1O95813 267 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms