RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 MAFKO60675 156 aa24.93■■□□□ 1.58
VEGFA-209ENST00000425836 TMCC1O94876 653 aa24.93■■□□□ 1.58
VEGFA-209ENST00000425836 PTPN7P35236 360 aa24.93■■□□□ 1.58
VEGFA-209ENST00000425836 NRLP54845 237 aa24.93■■□□□ 1.58
VEGFA-209ENST00000425836 ZNF211Q13398 564 aaPredicted RBP24.93■■□□□ 1.58
VEGFA-209ENST00000425836 DCAF12L1Q5VU92 463 aa24.93■■□□□ 1.58
VEGFA-209ENST00000425836 NPNTQ6UXI9 565 aa24.93■■□□□ 1.58
VEGFA-209ENST00000425836 STK40Q8N2I9 435 aa24.93■■□□□ 1.58
VEGFA-209ENST00000425836 ATPAF2Q8N5M1 289 aa24.93■■□□□ 1.58
VEGFA-209ENST00000425836 ISG20Q96AZ6 181 aaKnown RBP24.93■■□□□ 1.58
VEGFA-209ENST00000425836 FAM129BQ96TA1 746 aa24.93■■□□□ 1.58
VEGFA-209ENST00000425836 HERPUD2Q9BSE4 406 aa24.93■■□□□ 1.58
VEGFA-209ENST00000425836 KCNH6Q9H252 994 aa24.93■■□□□ 1.58
VEGFA-209ENST00000425836 FBRSQ9HAH7 460 aa24.93■■□□□ 1.58
VEGFA-209ENST00000425836 BCCIPQ9P287 314 aaKnown RBP eCLIP24.93■■□□□ 1.58
VEGFA-209ENST00000425836 HEY1Q9Y5J3 304 aa24.93■■□□□ 1.58
VEGFA-209ENST00000425836 GARSP41250 739 aaKnown RBP24.93■■□□□ 1.58
VEGFA-209ENST00000425836 RPS6KA1Q15418 735 aa24.93■■□□□ 1.58
VEGFA-209ENST00000425836 CYTH1Q15438 398 aa24.93■■□□□ 1.58
VEGFA-209ENST00000425836 METTL3Q86U44 580 aaKnown RBP24.93■■□□□ 1.58
VEGFA-209ENST00000425836 PGBD3Q8N328 593 aa24.93■■□□□ 1.58
VEGFA-209ENST00000425836 PCDH20Q8N6Y1 951 aaKnown RBP24.93■■□□□ 1.58
VEGFA-209ENST00000425836 OR2A12Q8NGT7 310 aa24.93■■□□□ 1.58
VEGFA-209ENST00000425836 OSBPL8Q9BZF1 889 aa24.93■■□□□ 1.58
VEGFA-209ENST00000425836 RSPH9Q9H1X1 276 aaPredicted RBP24.93■■□□□ 1.58
VEGFA-209ENST00000425836 EFR3BQ9Y2G0 817 aa24.93■■□□□ 1.58
VEGFA-209ENST00000425836 CHD5Q8TDI0 1954 aa24.92■■□□□ 1.58
VEGFA-209ENST00000425836 AXIN1O15169 862 aa24.92■■□□□ 1.58
VEGFA-209ENST00000425836 BNIP3LO60238 219 aa24.92■■□□□ 1.58
VEGFA-209ENST00000425836 PEX11BO96011 259 aa24.92■■□□□ 1.58
VEGFA-209ENST00000425836 C7P10643 843 aa24.92■■□□□ 1.58
VEGFA-209ENST00000425836 MX2P20592 715 aa24.92■■□□□ 1.58
VEGFA-209ENST00000425836 ELAVL3Q14576 367 aaKnown RBP24.92■■□□□ 1.58
VEGFA-209ENST00000425836 BBS12Q6ZW61 710 aa24.92■■□□□ 1.58
VEGFA-209ENST00000425836 WDR5BQ86VZ2 330 aa24.92■■□□□ 1.58
VEGFA-209ENST00000425836 LONP2Q86WA8 852 aa24.92■■□□□ 1.58
VEGFA-209ENST00000425836 TPSD1Q9BZJ3 242 aa24.92■■□□□ 1.58
VEGFA-209ENST00000425836 ZSCAN32Q9NX65 697 aa24.92■■□□□ 1.58
VEGFA-209ENST00000425836 SAE1Q9UBE0 346 aaPredicted RBP24.92■■□□□ 1.58
VEGFA-209ENST00000425836 CETN2P41208 172 aa24.91■■□□□ 1.58
VEGFA-209ENST00000425836 RPS14P62263 151 aaKnown RBP24.91■■□□□ 1.58
VEGFA-209ENST00000425836 LRRN4Q8WUT4 740 aa24.91■■□□□ 1.58
VEGFA-209ENST00000425836 SIPA1Q96FS4 1042 aa24.91■■□□□ 1.58
VEGFA-209ENST00000425836 ZNF599Q96NL3 588 aa24.91■■□□□ 1.58
VEGFA-209ENST00000425836 TLR10Q9BXR5 811 aa24.91■■□□□ 1.58
VEGFA-209ENST00000425836 TM6SF2Q9BZW4 377 aa24.91■■□□□ 1.58
VEGFA-209ENST00000425836 MCF2LO15068 1137 aa24.9■■□□□ 1.58
VEGFA-209ENST00000425836 TGM2P21980 687 aa24.9■■□□□ 1.58
VEGFA-209ENST00000425836 NR2C2P49116 596 aa24.9■■□□□ 1.58
VEGFA-209ENST00000425836 RFTN1Q14699 578 aaPredicted RBP24.9■■□□□ 1.58
VEGFA-209ENST00000425836 CARD16Q5EG05 197 aa24.9■■□□□ 1.58
VEGFA-209ENST00000425836 KIAA1324Q6UXG2 1013 aaKnown RBP24.9■■□□□ 1.58
VEGFA-209ENST00000425836 DPY19L3Q6ZPD9 716 aa24.9■■□□□ 1.58
VEGFA-209ENST00000425836 PLPP6Q8IY26 295 aa24.9■■□□□ 1.58
VEGFA-209ENST00000425836 ZBTB44Q8NCP5 570 aa24.9■■□□□ 1.58
VEGFA-209ENST00000425836 OR8D1Q8WZ84 308 aa24.9■■□□□ 1.58
VEGFA-209ENST00000425836 PRCCQ92733 491 aaPredicted RBP24.9■■□□□ 1.58
VEGFA-209ENST00000425836 OLFM3Q96PB7 478 aa24.9■■□□□ 1.58
VEGFA-209ENST00000425836 TSGA13Q96PP4 275 aa24.9■■□□□ 1.58
VEGFA-209ENST00000425836 GOLGA6L9A6NEM1 432 aa24.89■■□□□ 1.58
VEGFA-209ENST00000425836 PECAM1P16284 738 aaPredicted RBP24.89■■□□□ 1.58
VEGFA-209ENST00000425836 ZNF569Q5MCW4 686 aa24.89■■□□□ 1.58
VEGFA-209ENST00000425836 TMCO4Q5TGY1 634 aa24.89■■□□□ 1.58
VEGFA-209ENST00000425836 ZNF776Q68DI1 518 aaPredicted RBP24.89■■□□□ 1.58
VEGFA-209ENST00000425836 CACUL1Q86Y37 369 aa24.89■■□□□ 1.58
VEGFA-209ENST00000425836 MMAAQ8IVH4 418 aaKnown RBP24.89■■□□□ 1.58
VEGFA-209ENST00000425836 CHST14Q8NCH0 376 aa24.89■■□□□ 1.58
VEGFA-209ENST00000425836 HDAC11Q96DB2 347 aa24.89■■□□□ 1.58
VEGFA-209ENST00000425836 CCDC114Q96M63 670 aa24.89■■□□□ 1.58
VEGFA-209ENST00000425836 LHX3Q9UBR4 397 aa24.89■■□□□ 1.58
VEGFA-209ENST00000425836 HCN4Q9Y3Q4 1203 aa24.89■■□□□ 1.58
VEGFA-209ENST00000425836 FARP1Q9Y4F1 1045 aaPredicted RBP24.89■■□□□ 1.58
VEGFA-209ENST00000425836 ALOX15BO15296 676 aa24.88■■□□□ 1.57
VEGFA-209ENST00000425836 KIF5CO60282 957 aa24.88■■□□□ 1.57
VEGFA-209ENST00000425836 RNASEH1O60930 286 aaKnown RBP24.88■■□□□ 1.57
VEGFA-209ENST00000425836 CCNCP24863 283 aa24.88■■□□□ 1.57
VEGFA-209ENST00000425836 RECQLP46063 649 aaPredicted RBP24.88■■□□□ 1.57
VEGFA-209ENST00000425836 PTPN5P54829 565 aa24.88■■□□□ 1.57
VEGFA-209ENST00000425836 RHOAP61586 193 aa24.88■■□□□ 1.57
VEGFA-209ENST00000425836 SLC10A7Q0GE19 358 aa24.88■■□□□ 1.57
VEGFA-209ENST00000425836 LBRQ14739 615 aaKnown RBP24.88■■□□□ 1.57
VEGFA-209ENST00000425836 PDK1Q15118 436 aa24.88■■□□□ 1.57
VEGFA-209ENST00000425836 CCNYQ8ND76 341 aa24.88■■□□□ 1.57
VEGFA-209ENST00000425836 LGMNQ99538 433 aa24.88■■□□□ 1.57
VEGFA-209ENST00000425836 PPM1HQ9ULR3 514 aa24.88■■□□□ 1.57
VEGFA-209ENST00000425836 PCDHGA2Q9Y5H1 932 aa24.88■■□□□ 1.57
VEGFA-209ENST00000425836 GSRP00390 522 aa24.88■■□□□ 1.57
VEGFA-209ENST00000425836 CHRNA3P32297 505 aa24.88■■□□□ 1.57
VEGFA-209ENST00000425836 SNRPD1P62314 119 aaKnown RBP24.88■■□□□ 1.57
VEGFA-209ENST00000425836 ATXN7L2Q5T6C5 722 aaPredicted RBP24.88■■□□□ 1.57
VEGFA-209ENST00000425836 SLC35F6Q8N357 371 aa24.88■■□□□ 1.57
VEGFA-209ENST00000425836 TSEN2Q8NCE0 465 aaKnown RBP24.88■■□□□ 1.57
VEGFA-209ENST00000425836 OR2AP1Q8NGE2 309 aa24.88■■□□□ 1.57
VEGFA-209ENST00000425836 P3H4Q92791 437 aa24.88■■□□□ 1.57
VEGFA-209ENST00000425836 HAUS1Q96CS2 278 aa24.88■■□□□ 1.57
VEGFA-209ENST00000425836 JRKLQ9Y4A0 524 aa24.88■■□□□ 1.57
VEGFA-209ENST00000425836 KCNK3O14649 394 aa24.87■■□□□ 1.57
VEGFA-209ENST00000425836 MATN3O15232 486 aa24.87■■□□□ 1.57
VEGFA-209ENST00000425836 TJP3O95049 919 aa24.87■■□□□ 1.57
VEGFA-209ENST00000425836 CTSLP07711 333 aa24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms