RNA–Protein interactions for RNA: ENST00000425695.5

HTATSF1-202, Transcript of HIV-1 Tat specific factor 1, humanhuman

TSL 3

Gene HTATSF1, Length 885 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-202ENST00000425695 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP25.51■■□□□ 1.67
HTATSF1-202ENST00000425695 RFX8Q6ZV50 586 aa25.51■■□□□ 1.67
HTATSF1-202ENST00000425695 CPNE8Q86YQ8 564 aa25.51■■□□□ 1.67
HTATSF1-202ENST00000425695 PSTKQ8IV42 348 aaKnown RBP25.51■■□□□ 1.67
HTATSF1-202ENST00000425695 NIPA2Q8N8Q9 360 aa25.51■■□□□ 1.67
HTATSF1-202ENST00000425695 NETO2Q8NC67 525 aa25.51■■□□□ 1.67
HTATSF1-202ENST00000425695 CELF6Q96J87 481 aaKnown RBP25.51■■□□□ 1.67
HTATSF1-202ENST00000425695 EIF3CQ99613 913 aaKnown RBP25.51■■□□□ 1.67
HTATSF1-202ENST00000425695 FSCN3Q9NQT6 498 aa25.51■■□□□ 1.67
HTATSF1-202ENST00000425695 CWC15Q9P013 229 aaKnown RBP25.51■■□□□ 1.67
HTATSF1-202ENST00000425695 UVRAGQ9P2Y5 699 aa25.51■■□□□ 1.67
HTATSF1-202ENST00000425695 ALOX15BO15296 676 aa25.5■■□□□ 1.67
HTATSF1-202ENST00000425695 FSBPO95073 299 aa25.5■■□□□ 1.67
HTATSF1-202ENST00000425695 CTSLP07711 333 aa25.5■■□□□ 1.67
HTATSF1-202ENST00000425695 TMEM253P0C7T8 217 aa25.5■■□□□ 1.67
HTATSF1-202ENST00000425695 ERCC2P18074 760 aa25.5■■□□□ 1.67
HTATSF1-202ENST00000425695 DPP6P42658 865 aa25.5■■□□□ 1.67
HTATSF1-202ENST00000425695 YBEYP58557 167 aaPredicted RBP25.5■■□□□ 1.67
HTATSF1-202ENST00000425695 DUOXA1Q1HG43 343 aa25.5■■□□□ 1.67
HTATSF1-202ENST00000425695 FAM46CQ5VWP2 391 aa25.5■■□□□ 1.67
HTATSF1-202ENST00000425695 DPY19L3Q6ZPD9 716 aa25.5■■□□□ 1.67
HTATSF1-202ENST00000425695 UMODL1-AS1Q8N2C9 162 aa25.5■■□□□ 1.67
HTATSF1-202ENST00000425695 STAU2Q9NUL3 570 aaKnown RBP eCLIP25.5■■□□□ 1.67
HTATSF1-202ENST00000425695 EIF2B4Q9UI10 523 aaKnown RBP25.5■■□□□ 1.67
HTATSF1-202ENST00000425695 CDV3Q9UKY7 258 aaKnown RBP25.5■■□□□ 1.67
HTATSF1-202ENST00000425695 TMEM110-MUSTN1A8MSY1 372 aa25.49■■□□□ 1.67
HTATSF1-202ENST00000425695 C1QTNF3-AMACRE9PGA6 284 aa25.49■■□□□ 1.67
HTATSF1-202ENST00000425695 ARSIQ5FYB1 569 aa25.49■■□□□ 1.67
HTATSF1-202ENST00000425695 OR14C36Q8NHC7 312 aa25.49■■□□□ 1.67
HTATSF1-202ENST00000425695 GRIN3AQ8TCU5 1115 aa25.49■■□□□ 1.67
HTATSF1-202ENST00000425695 NUSAP1Q9BXS6 441 aaKnown RBP25.49■■□□□ 1.67
HTATSF1-202ENST00000425695 TM6SF2Q9BZW4 377 aa25.49■■□□□ 1.67
HTATSF1-202ENST00000425695 CEP44Q9C0F1 390 aa25.49■■□□□ 1.67
HTATSF1-202ENST00000425695 OSGEPQ9NPF4 335 aa25.49■■□□□ 1.67
HTATSF1-202ENST00000425695 LAMA1P25391 3075 aa25.48■■□□□ 1.67
HTATSF1-202ENST00000425695 LNP1A1A4G5 178 aa25.48■■□□□ 1.67
HTATSF1-202ENST00000425695 H3BRJ5 948 aa25.48■■□□□ 1.67
HTATSF1-202ENST00000425695 RNF103O00237 685 aa25.48■■□□□ 1.67
HTATSF1-202ENST00000425695 KPNA3O00505 521 aaPredicted RBP25.48■■□□□ 1.67
HTATSF1-202ENST00000425695 DRD3P35462 400 aa25.48■■□□□ 1.67
HTATSF1-202ENST00000425695 GJC1P36383 396 aa25.48■■□□□ 1.67
HTATSF1-202ENST00000425695 GEMIN4P57678 1058 aaKnown RBP25.48■■□□□ 1.67
HTATSF1-202ENST00000425695 SLC25A11Q02978 314 aaKnown RBP25.48■■□□□ 1.67
HTATSF1-202ENST00000425695 CNTN1Q12860 1018 aa25.48■■□□□ 1.67
HTATSF1-202ENST00000425695 SERINC3Q13530 473 aa25.48■■□□□ 1.67
HTATSF1-202ENST00000425695 PARP15Q460N3 678 aa25.48■■□□□ 1.67
HTATSF1-202ENST00000425695 CARD16Q5EG05 197 aa25.48■■□□□ 1.67
HTATSF1-202ENST00000425695 PEAR1Q5VY43 1037 aaPredicted RBP25.48■■□□□ 1.67
HTATSF1-202ENST00000425695 NCEH1Q6PIU2 408 aa25.48■■□□□ 1.67
HTATSF1-202ENST00000425695 RYBPQ8N488 228 aaPredicted RBP25.48■■□□□ 1.67
HTATSF1-202ENST00000425695 ZCCHC9Q8N567 271 aaKnown RBP25.48■■□□□ 1.67
HTATSF1-202ENST00000425695 PCDH20Q8N6Y1 951 aaKnown RBP25.48■■□□□ 1.67
HTATSF1-202ENST00000425695 CEP76Q8TAP6 659 aa25.48■■□□□ 1.67
HTATSF1-202ENST00000425695 SLC35G2Q8TBE7 412 aa25.48■■□□□ 1.67
HTATSF1-202ENST00000425695 NETO1Q8TDF5 533 aa25.48■■□□□ 1.67
HTATSF1-202ENST00000425695 DNASE2BQ8WZ79 361 aa25.48■■□□□ 1.67
HTATSF1-202ENST00000425695 EDEM2Q9BV94 578 aa25.48■■□□□ 1.67
HTATSF1-202ENST00000425695 SLC39A8Q9C0K1 460 aa25.48■■□□□ 1.67
HTATSF1-202ENST00000425695 DONSONQ9NYP3 566 aa25.48■■□□□ 1.67
HTATSF1-202ENST00000425695 EVLQ9UI08 416 aaPredicted RBP25.48■■□□□ 1.67
HTATSF1-202ENST00000425695 FZD4Q9ULV1 537 aa25.48■■□□□ 1.67
HTATSF1-202ENST00000425695 SLC6A14Q9UN76 642 aa25.48■■□□□ 1.67
HTATSF1-202ENST00000425695 ADAMTS9Q9P2N4 1935 aa25.47■■□□□ 1.67
HTATSF1-202ENST00000425695 PROSCO94903 275 aa25.47■■□□□ 1.67
HTATSF1-202ENST00000425695 GNSP15586 552 aa25.47■■□□□ 1.67
HTATSF1-202ENST00000425695 AMPD1P23109 780 aa25.47■■□□□ 1.67
HTATSF1-202ENST00000425695 HOXD12P35452 270 aa25.47■■□□□ 1.67
HTATSF1-202ENST00000425695 ARL4AP40617 200 aa25.47■■□□□ 1.67
HTATSF1-202ENST00000425695 HCAR3P49019 387 aa25.47■■□□□ 1.67
HTATSF1-202ENST00000425695 NDST2P52849 883 aa25.47■■□□□ 1.67
HTATSF1-202ENST00000425695 DPYSL2Q16555 572 aa25.47■■□□□ 1.67
HTATSF1-202ENST00000425695 SLC23A3Q6PIS1 610 aa25.47■■□□□ 1.67
HTATSF1-202ENST00000425695 TEKT4Q8WW24 435 aa25.47■■□□□ 1.67
HTATSF1-202ENST00000425695 BIRC7Q96CA5 298 aa25.47■■□□□ 1.67
HTATSF1-202ENST00000425695 PCED1AQ9H1Q7 454 aa25.47■■□□□ 1.67
HTATSF1-202ENST00000425695 LRRC19Q9H756 370 aa25.47■■□□□ 1.67
HTATSF1-202ENST00000425695 HECAQ9UBI9 543 aaPredicted RBP25.47■■□□□ 1.67
HTATSF1-202ENST00000425695 IL36AQ9UHA7 158 aa25.47■■□□□ 1.67
HTATSF1-202ENST00000425695 ZBTB32Q9Y2Y4 487 aaPredicted RBP25.47■■□□□ 1.67
HTATSF1-202ENST00000425695 ZSCAN5CA6NGD5 496 aaPredicted RBP25.46■■□□□ 1.67
HTATSF1-202ENST00000425695 LRRC72A6NJI9 287 aa25.46■■□□□ 1.67
HTATSF1-202ENST00000425695 PRNPP04156 253 aa25.46■■□□□ 1.67
HTATSF1-202ENST00000425695 PAPOLAP51003 745 aaKnown RBP25.46■■□□□ 1.67
HTATSF1-202ENST00000425695 CCNHP51946 323 aaPredicted RBP25.46■■□□□ 1.67
HTATSF1-202ENST00000425695 DPYSQ14117 519 aa25.46■■□□□ 1.67
HTATSF1-202ENST00000425695 KRT81Q14533 505 aa25.46■■□□□ 1.67
HTATSF1-202ENST00000425695 MESDQ14696 234 aa25.46■■□□□ 1.67
HTATSF1-202ENST00000425695 HADHQ16836 314 aaKnown RBP25.46■■□□□ 1.67
HTATSF1-202ENST00000425695 ATP13A4Q4VNC1 1196 aa25.46■■□□□ 1.67
HTATSF1-202ENST00000425695 STPG1Q5TH74 334 aa25.46■■□□□ 1.67
HTATSF1-202ENST00000425695 KIAA0895LQ68EN5 471 aa25.46■■□□□ 1.67
HTATSF1-202ENST00000425695 POLNQ7Z5Q5 900 aa25.46■■□□□ 1.67
HTATSF1-202ENST00000425695 TMIEQ8NEW7 156 aa25.46■■□□□ 1.67
HTATSF1-202ENST00000425695 OR6K2Q8NGY2 324 aa25.46■■□□□ 1.67
HTATSF1-202ENST00000425695 HEPHQ9BQS7 1158 aa25.46■■□□□ 1.67
HTATSF1-202ENST00000425695 PCDH18Q9HCL0 1135 aa25.46■■□□□ 1.67
HTATSF1-202ENST00000425695 MFHAS1Q9Y4C4 1052 aa25.46■■□□□ 1.67
HTATSF1-202ENST00000425695 TBC1D3DA0A087WVF3 549 aa25.45■■□□□ 1.66
HTATSF1-202ENST00000425695 TBC1D3IA0A087WXS9 549 aa25.45■■□□□ 1.66
HTATSF1-202ENST00000425695 TBC1D3EA0A087X179 549 aa25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms