RNA–Protein interactions for RNA: ENST00000423945.5

SBDSP1-202, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 3 BASIC

Gene SBDSP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-202ENST00000423945 A0A1W2PPC4 97 aa18.2■□□□□ 0.5
SBDSP1-202ENST00000423945 LRRC72A6NJI9 287 aa18.2■□□□□ 0.5
SBDSP1-202ENST00000423945 UPK3BL1B0FP48 263 aa18.2■□□□□ 0.5
SBDSP1-202ENST00000423945 UPK3BL2E5RIL1 263 aa18.2■□□□□ 0.5
SBDSP1-202ENST00000423945 WNT9AO14904 365 aa18.2■□□□□ 0.5
SBDSP1-202ENST00000423945 PLRG1O43660 514 aaKnown RBP18.2■□□□□ 0.5
SBDSP1-202ENST00000423945 CREB3O43889 395 aa18.2■□□□□ 0.5
SBDSP1-202ENST00000423945 OPHN1O60890 802 aa18.2■□□□□ 0.5
SBDSP1-202ENST00000423945 SERPING1P05155 500 aa18.2■□□□□ 0.5
SBDSP1-202ENST00000423945 FAM228BP0C875 321 aa18.2■□□□□ 0.5
SBDSP1-202ENST00000423945 EPHB2P29323 1055 aa18.2■□□□□ 0.5
SBDSP1-202ENST00000423945 NOVA1P51513 510 aaKnown RBP18.2■□□□□ 0.5
SBDSP1-202ENST00000423945 CCR5P51681 352 aa18.2■□□□□ 0.5
SBDSP1-202ENST00000423945 SLC20A2Q08357 652 aa18.2■□□□□ 0.5
SBDSP1-202ENST00000423945 PIP5KL1Q5T9C9 394 aa18.2■□□□□ 0.5
SBDSP1-202ENST00000423945 FAM46CQ5VWP2 391 aa18.2■□□□□ 0.5
SBDSP1-202ENST00000423945 DPY19L3Q6ZPD9 716 aa18.2■□□□□ 0.5
SBDSP1-202ENST00000423945 DEFB124Q8NES8 71 aa18.2■□□□□ 0.5
SBDSP1-202ENST00000423945 TMIEQ8NEW7 156 aa18.2■□□□□ 0.5
SBDSP1-202ENST00000423945 SNRNP25Q9BV90 132 aaKnown RBP18.2■□□□□ 0.5
SBDSP1-202ENST00000423945 CEP44Q9C0F1 390 aa18.2■□□□□ 0.5
SBDSP1-202ENST00000423945 TSPY26PQ9H489 355 aa18.2■□□□□ 0.5
SBDSP1-202ENST00000423945 LUC7L2Q9Y383 392 aaKnown RBP18.2■□□□□ 0.5
SBDSP1-202ENST00000423945 BZW2Q9Y6E2 419 aaKnown RBP18.2■□□□□ 0.5
SBDSP1-202ENST00000423945 CXorf51AA0A1B0GTR3 108 aa18.19■□□□□ 0.5
SBDSP1-202ENST00000423945 C1QTNF3-AMACRE9PGA6 284 aa18.19■□□□□ 0.5
SBDSP1-202ENST00000423945 LATO43561 262 aa18.19■□□□□ 0.5
SBDSP1-202ENST00000423945 RAMP2O60895 175 aa18.19■□□□□ 0.5
SBDSP1-202ENST00000423945 LRCH4O75427 683 aa18.19■□□□□ 0.5
SBDSP1-202ENST00000423945 WNT1P04628 370 aa18.19■□□□□ 0.5
SBDSP1-202ENST00000423945 AFF3P51826 1226 aaKnown RBP18.19■□□□□ 0.5
SBDSP1-202ENST00000423945 KIF19Q2TAC6 998 aa18.19■□□□□ 0.5
SBDSP1-202ENST00000423945 ARSIQ5FYB1 569 aa18.19■□□□□ 0.5
SBDSP1-202ENST00000423945 LEKR1Q6ZMV7 388 aa18.19■□□□□ 0.5
SBDSP1-202ENST00000423945 PCDH20Q8N6Y1 951 aaKnown RBP18.19■□□□□ 0.5
SBDSP1-202ENST00000423945 IQCDQ96DY2 449 aa18.19■□□□□ 0.5
SBDSP1-202ENST00000423945 SLC6A18Q96N87 628 aa18.19■□□□□ 0.5
SBDSP1-202ENST00000423945 KCTD15Q96SI1 283 aaPredicted RBP18.19■□□□□ 0.5
SBDSP1-202ENST00000423945 EPAS1Q99814 870 aa18.19■□□□□ 0.5
SBDSP1-202ENST00000423945 ZDHHC5Q9C0B5 715 aa18.19■□□□□ 0.5
SBDSP1-202ENST00000423945 THAP2Q9H0W7 228 aa18.19■□□□□ 0.5
SBDSP1-202ENST00000423945 PCSK1NQ9UHG2 260 aa18.19■□□□□ 0.5
SBDSP1-202ENST00000423945 AP4E1Q9UPM8 1137 aa18.19■□□□□ 0.5
SBDSP1-202ENST00000423945 SNX11Q9Y5W9 270 aa18.19■□□□□ 0.5
SBDSP1-202ENST00000423945 SCINQ9Y6U3 715 aa18.19■□□□□ 0.5
SBDSP1-202ENST00000423945 CABIN1Q9Y6J0 2220 aa18.19■□□□□ 0.5
SBDSP1-202ENST00000423945 SLC7A4O43246 635 aa18.18■□□□□ 0.5
SBDSP1-202ENST00000423945 KDELR3O43731 214 aa18.18■□□□□ 0.5
SBDSP1-202ENST00000423945 MYBL1P10243 752 aa18.18■□□□□ 0.5
SBDSP1-202ENST00000423945 TCF4P15884 667 aa18.18■□□□□ 0.5
SBDSP1-202ENST00000423945 MIPP30301 263 aa18.18■□□□□ 0.5
SBDSP1-202ENST00000423945 HNRNPH3P31942 346 aaKnown RBP18.18■□□□□ 0.5
SBDSP1-202ENST00000423945 ETFBP38117 255 aa18.18■□□□□ 0.5
SBDSP1-202ENST00000423945 GRIA4P48058 902 aa18.18■□□□□ 0.5
SBDSP1-202ENST00000423945 POLD3Q15054 466 aaPredicted RBP18.18■□□□□ 0.5
SBDSP1-202ENST00000423945 NFKBIBQ15653 356 aa18.18■□□□□ 0.5
SBDSP1-202ENST00000423945 CARD16Q5EG05 197 aa18.18■□□□□ 0.5
SBDSP1-202ENST00000423945 GRIN3AQ8TCU5 1115 aa18.18■□□□□ 0.5
SBDSP1-202ENST00000423945 TRIM11Q96F44 468 aa18.18■□□□□ 0.5
SBDSP1-202ENST00000423945 HMCESQ96FZ2 354 aa18.18■□□□□ 0.5
SBDSP1-202ENST00000423945 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.18■□□□□ 0.5
SBDSP1-202ENST00000423945 IL36AQ9UHA7 158 aa18.18■□□□□ 0.5
SBDSP1-202ENST00000423945 FNDC3AQ9Y2H6 1198 aaKnown RBP18.18■□□□□ 0.5
SBDSP1-202ENST00000423945 TBC1D3DA0A087WVF3 549 aa18.17■□□□□ 0.5
SBDSP1-202ENST00000423945 TBC1D3IA0A087WXS9 549 aa18.17■□□□□ 0.5
SBDSP1-202ENST00000423945 TBC1D3EA0A087X179 549 aa18.17■□□□□ 0.5
SBDSP1-202ENST00000423945 TBC1D3KA0A087X1G2 549 aa18.17■□□□□ 0.5
SBDSP1-202ENST00000423945 A0A1W2PR77 199 aa18.17■□□□□ 0.5
SBDSP1-202ENST00000423945 TBC1D3FA6NER0 549 aaPredicted RBP18.17■□□□□ 0.5
SBDSP1-202ENST00000423945 TBC1D3LB9A6J9 549 aa18.17■□□□□ 0.5
SBDSP1-202ENST00000423945 KPNA3O00505 521 aaPredicted RBP18.17■□□□□ 0.5
SBDSP1-202ENST00000423945 LEFTY1O75610 366 aa18.17■□□□□ 0.5
SBDSP1-202ENST00000423945 PRNPP04156 253 aa18.17■□□□□ 0.5
SBDSP1-202ENST00000423945 TBC1D3HP0C7X1 549 aa18.17■□□□□ 0.5
SBDSP1-202ENST00000423945 CEACAM1P13688 526 aa18.17■□□□□ 0.5
SBDSP1-202ENST00000423945 IL1R2P27930 398 aa18.17■□□□□ 0.5
SBDSP1-202ENST00000423945 CCNHP51946 323 aaPredicted RBP18.17■□□□□ 0.5
SBDSP1-202ENST00000423945 FAM193AP78312 1265 aa18.17■□□□□ 0.5
SBDSP1-202ENST00000423945 HLA-BQ31612 363 aa18.17■□□□□ 0.5
SBDSP1-202ENST00000423945 ERMARDQ5T6L9 678 aa18.17■□□□□ 0.5
SBDSP1-202ENST00000423945 TBC1D3GQ6DHY5 549 aa18.17■□□□□ 0.5
SBDSP1-202ENST00000423945 TBC1D3CQ6IPX1 549 aa18.17■□□□□ 0.5
SBDSP1-202ENST00000423945 TBC1D3Q8IZP1 549 aaPredicted RBP18.17■□□□□ 0.5
SBDSP1-202ENST00000423945 UMODL1-AS1Q8N2C9 162 aa18.17■□□□□ 0.5
SBDSP1-202ENST00000423945 RNF214Q8ND24 703 aa18.17■□□□□ 0.5
SBDSP1-202ENST00000423945 ISG20Q96AZ6 181 aaKnown RBP18.17■□□□□ 0.5
SBDSP1-202ENST00000423945 ARHGEF26Q96DR7 871 aa18.17■□□□□ 0.5
SBDSP1-202ENST00000423945 CCDC114Q96M63 670 aa18.17■□□□□ 0.5
SBDSP1-202ENST00000423945 TM6SF2Q9BZW4 377 aa18.17■□□□□ 0.5
SBDSP1-202ENST00000423945 KDM4CQ9H3R0 1056 aa18.17■□□□□ 0.5
SBDSP1-202ENST00000423945 DHX35Q9H5Z1 703 aaKnown RBP18.17■□□□□ 0.5
SBDSP1-202ENST00000423945 GAREM1Q9H706 876 aa18.17■□□□□ 0.5
SBDSP1-202ENST00000423945 LRRC19Q9H756 370 aa18.17■□□□□ 0.5
SBDSP1-202ENST00000423945 ANKRD6Q9Y2G4 727 aa18.17■□□□□ 0.5
SBDSP1-202ENST00000423945 FARP1Q9Y4F1 1045 aaPredicted RBP18.17■□□□□ 0.5
SBDSP1-202ENST00000423945 RASA4BC9J798 803 aa18.16■□□□□ 0.5
SBDSP1-202ENST00000423945 KCNK3O14649 394 aa18.16■□□□□ 0.5
SBDSP1-202ENST00000423945 RASA4O43374 803 aa18.16■□□□□ 0.5
SBDSP1-202ENST00000423945 PMLP29590 882 aa18.16■□□□□ 0.5
SBDSP1-202ENST00000423945 GKP32189 559 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms