RNA–Protein interactions for RNA: ENST00000422622.3

SSPN-202, Transcript of sarcospan, humanhuman

TSL 2 BASIC

Gene SSPN, Length 4,348 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-202ENST00000422622 NCLNQ969V3 563 aa10.21□□□□□ -0.78
SSPN-202ENST00000422622 CORO1BQ9BR76 489 aa10.21□□□□□ -0.78
SSPN-202ENST00000422622 STX18Q9P2W9 335 aaKnown RBP10.21□□□□□ -0.78
SSPN-202ENST00000422622 WDR90Q96KV7 1748 aa10.21□□□□□ -0.78
SSPN-202ENST00000422622 E9PAM4 449 aa10.21□□□□□ -0.78
SSPN-202ENST00000422622 VAPBO95292 243 aa10.21□□□□□ -0.78
SSPN-202ENST00000422622 TOP3BO95985 862 aaKnown RBP10.21□□□□□ -0.78
SSPN-202ENST00000422622 ATP5C1P36542 298 aaKnown RBP10.21□□□□□ -0.78
SSPN-202ENST00000422622 INPP1P49441 399 aa10.21□□□□□ -0.78
SSPN-202ENST00000422622 RPS24P62847 133 aaKnown RBP10.21□□□□□ -0.78
SSPN-202ENST00000422622 PDCD2Q16342 344 aaPredicted RBP10.21□□□□□ -0.78
SSPN-202ENST00000422622 PTAR1Q7Z6K3 402 aaPredicted RBP10.21□□□□□ -0.78
SSPN-202ENST00000422622 RAB44Q7Z6P3 723 aaPredicted RBP10.21□□□□□ -0.78
SSPN-202ENST00000422622 MRPL10Q7Z7H8 261 aaKnown RBP10.21□□□□□ -0.78
SSPN-202ENST00000422622 SUGP1Q8IWZ8 645 aaKnown RBP10.21□□□□□ -0.78
SSPN-202ENST00000422622 REM2Q8IYK8 340 aaPredicted RBP10.21□□□□□ -0.78
SSPN-202ENST00000422622 MFSD3Q96ES6 412 aa10.21□□□□□ -0.78
SSPN-202ENST00000422622 CNBD2Q96M20 576 aa10.21□□□□□ -0.78
SSPN-202ENST00000422622 IL1RL2Q9HB29 575 aa10.21□□□□□ -0.78
SSPN-202ENST00000422622 ARMCX1Q9P291 453 aa10.21□□□□□ -0.78
SSPN-202ENST00000422622 C15orf41Q9Y2V0 281 aa10.21□□□□□ -0.78
SSPN-202ENST00000422622 CD86P42081 329 aa10.2□□□□□ -0.78
SSPN-202ENST00000422622 LAMB3Q13751 1172 aa10.2□□□□□ -0.78
SSPN-202ENST00000422622 THEMIS2Q5TEJ8 643 aa10.2□□□□□ -0.78
SSPN-202ENST00000422622 MARC1Q5VT66 337 aa10.2□□□□□ -0.78
SSPN-202ENST00000422622 FAM126BQ8IXS8 530 aa10.2□□□□□ -0.78
SSPN-202ENST00000422622 BBS5Q8N3I7 341 aa10.2□□□□□ -0.78
SSPN-202ENST00000422622 EIF1ADQ8N9N8 165 aaKnown RBP10.2□□□□□ -0.78
SSPN-202ENST00000422622 PGM2Q96G03 612 aa10.2□□□□□ -0.78
SSPN-202ENST00000422622 GCNAQ96QF7 691 aa10.2□□□□□ -0.78
SSPN-202ENST00000422622 TM6SF2Q9BZW4 377 aa10.2□□□□□ -0.78
SSPN-202ENST00000422622 ADNPQ9H2P0 1102 aa10.2□□□□□ -0.78
SSPN-202ENST00000422622 CHRAC1Q9NRG0 131 aa10.2□□□□□ -0.78
SSPN-202ENST00000422622 NDFIP2Q9NV92 336 aa10.2□□□□□ -0.78
SSPN-202ENST00000422622 ORC6Q9Y5N6 252 aa10.2□□□□□ -0.78
SSPN-202ENST00000422622 LCTP09848 1927 aa10.2□□□□□ -0.78
SSPN-202ENST00000422622 MTMR11A4FU01 709 aa10.2□□□□□ -0.78
SSPN-202ENST00000422622 IRAK2O43187 625 aa10.2□□□□□ -0.78
SSPN-202ENST00000422622 AKAP10O43572 662 aa10.2□□□□□ -0.78
SSPN-202ENST00000422622 CDH18Q13634 790 aa10.2□□□□□ -0.78
SSPN-202ENST00000422622 ANGPTL8Q6UXH0 198 aa10.2□□□□□ -0.78
SSPN-202ENST00000422622 SLC39A5Q6ZMH5 540 aa10.2□□□□□ -0.78
SSPN-202ENST00000422622 UNC5AQ6ZN44 842 aa10.2□□□□□ -0.78
SSPN-202ENST00000422622 STRA8Q7Z7C7 330 aa10.2□□□□□ -0.78
SSPN-202ENST00000422622 NAT8LQ8N9F0 302 aa10.2□□□□□ -0.78
SSPN-202ENST00000422622 PTPRN2Q92932 1015 aa10.2□□□□□ -0.78
SSPN-202ENST00000422622 VPS39Q96JC1 886 aa10.2□□□□□ -0.78
SSPN-202ENST00000422622 MECRQ9BV79 373 aa10.2□□□□□ -0.78
SSPN-202ENST00000422622 PCDHB12Q9Y5F1 795 aa10.2□□□□□ -0.78
SSPN-202ENST00000422622 EME2A4GXA9 379 aaPredicted RBP10.2□□□□□ -0.78
SSPN-202ENST00000422622 CXorf49A8MYA2 514 aaPredicted RBP10.2□□□□□ -0.78
SSPN-202ENST00000422622 DPYSL4O14531 572 aa10.2□□□□□ -0.78
SSPN-202ENST00000422622 FYNP06241 537 aa10.2□□□□□ -0.78
SSPN-202ENST00000422622 SNRPAP09012 282 aaKnown RBP10.2□□□□□ -0.78
SSPN-202ENST00000422622 MYL2P10916 166 aa10.2□□□□□ -0.78
SSPN-202ENST00000422622 FDFT1P37268 417 aa10.2□□□□□ -0.78
SSPN-202ENST00000422622 SLC11A2P49281 568 aa10.2□□□□□ -0.78
SSPN-202ENST00000422622 GPX6P59796 221 aa10.2□□□□□ -0.78
SSPN-202ENST00000422622 SMAD3P84022 425 aaKnown RBP10.2□□□□□ -0.78
SSPN-202ENST00000422622 OR7D4Q8NG98 312 aa10.2□□□□□ -0.78
SSPN-202ENST00000422622 ALKBH8Q96BT7 664 aaKnown RBP10.2□□□□□ -0.78
SSPN-202ENST00000422622 MIEF2Q96C03 454 aa10.2□□□□□ -0.78
SSPN-202ENST00000422622 TSEN34Q9BSV6 310 aaKnown RBP10.2□□□□□ -0.78
SSPN-202ENST00000422622 FRMD8P1Q9BZ68 369 aaPredicted RBP10.2□□□□□ -0.78
SSPN-202ENST00000422622 SLC39A8Q9C0K1 460 aa10.2□□□□□ -0.78
SSPN-202ENST00000422622 USP29Q9HBJ7 922 aa10.2□□□□□ -0.78
SSPN-202ENST00000422622 MRPL17Q9NRX2 175 aaKnown RBP10.2□□□□□ -0.78
SSPN-202ENST00000422622 DDX18Q9NVP1 670 aaKnown RBP10.2□□□□□ -0.78
SSPN-202ENST00000422622 TRIM33Q9UPN9 1127 aa10.2□□□□□ -0.78
SSPN-202ENST00000422622 EFR3BQ9Y2G0 817 aa10.2□□□□□ -0.78
SSPN-202ENST00000422622 CLTBP09497 229 aa10.19□□□□□ -0.78
SSPN-202ENST00000422622 HDCP19113 662 aa10.19□□□□□ -0.78
SSPN-202ENST00000422622 NSUN2Q08J23 767 aaKnown RBP eCLIP10.19□□□□□ -0.78
SSPN-202ENST00000422622 DSC3Q14574 896 aa10.19□□□□□ -0.78
SSPN-202ENST00000422622 SNX30Q5VWJ9 437 aa10.19□□□□□ -0.78
SSPN-202ENST00000422622 IZUMO2Q6UXV1 221 aa10.19□□□□□ -0.78
SSPN-202ENST00000422622 CMC1Q7Z7K0 106 aa10.19□□□□□ -0.78
SSPN-202ENST00000422622 RNF148Q8N7C7 305 aa10.19□□□□□ -0.78
SSPN-202ENST00000422622 KCTD13Q8WZ19 329 aa10.19□□□□□ -0.78
SSPN-202ENST00000422622 HHIPL1Q96JK4 782 aa10.19□□□□□ -0.78
SSPN-202ENST00000422622 FOXP3Q9BZS1 431 aa10.19□□□□□ -0.78
SSPN-202ENST00000422622 SMG9Q9H0W8 520 aaKnown RBP10.19□□□□□ -0.78
SSPN-202ENST00000422622 EPB41L4BQ9H329 900 aa10.19□□□□□ -0.78
SSPN-202ENST00000422622 CAB39LQ9H9S4 337 aa10.19□□□□□ -0.78
SSPN-202ENST00000422622 MTMR10Q9NXD2 777 aa10.19□□□□□ -0.78
SSPN-202ENST00000422622 SLC17A7Q9P2U7 560 aa10.19□□□□□ -0.78
SSPN-202ENST00000422622 SUN2Q9UH99 717 aa10.19□□□□□ -0.78
SSPN-202ENST00000422622 ZNF229Q9UJW7 825 aa10.19□□□□□ -0.78
SSPN-202ENST00000422622 VPS28Q9UK41 221 aa10.19□□□□□ -0.78
SSPN-202ENST00000422622 PAIP2BQ9ULR5 123 aaKnown RBP10.19□□□□□ -0.78
SSPN-202ENST00000422622 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.19□□□□□ -0.78
SSPN-202ENST00000422622 GJB5O95377 273 aa10.19□□□□□ -0.78
SSPN-202ENST00000422622 TYMPP19971 482 aa10.19□□□□□ -0.78
SSPN-202ENST00000422622 BGNP21810 368 aa10.19□□□□□ -0.78
SSPN-202ENST00000422622 PTPN3P26045 913 aa10.19□□□□□ -0.78
SSPN-202ENST00000422622 CST5P28325 142 aaPredicted RBP10.19□□□□□ -0.78
SSPN-202ENST00000422622 CYP4F8P98187 520 aa10.19□□□□□ -0.78
SSPN-202ENST00000422622 ZNF177Q13360 481 aaPredicted RBP10.19□□□□□ -0.78
SSPN-202ENST00000422622 USP10Q14694 798 aaKnown RBP10.19□□□□□ -0.78
SSPN-202ENST00000422622 LDB1Q86U70 411 aaPredicted RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms