RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 PXNP49023 591 aaPredicted RBP9.46□□□□□ -0.9
PDGFC-202ENST00000422544 DGKEP52429 567 aa9.46□□□□□ -0.9
PDGFC-202ENST00000422544 SLC20A2Q08357 652 aa9.46□□□□□ -0.9
PDGFC-202ENST00000422544 ADCY2Q08462 1091 aa9.46□□□□□ -0.9
PDGFC-202ENST00000422544 DMWDQ09019 674 aa9.46□□□□□ -0.9
PDGFC-202ENST00000422544 STARD3Q14849 445 aa9.46□□□□□ -0.9
PDGFC-202ENST00000422544 RPS6KA1Q15418 735 aa9.46□□□□□ -0.9
PDGFC-202ENST00000422544 DLG2Q15700 870 aa9.46□□□□□ -0.9
PDGFC-202ENST00000422544 TFDP3Q5H9I0 405 aa9.46□□□□□ -0.9
PDGFC-202ENST00000422544 ZNF569Q5MCW4 686 aa9.46□□□□□ -0.9
PDGFC-202ENST00000422544 C9orf64Q5T6V5 341 aa9.46□□□□□ -0.9
PDGFC-202ENST00000422544 MEI1Q5TIA1 1274 aa9.46□□□□□ -0.9
PDGFC-202ENST00000422544 SLC9A4Q6AI14 798 aa9.46□□□□□ -0.9
PDGFC-202ENST00000422544 NPNTQ6UXI9 565 aa9.46□□□□□ -0.9
PDGFC-202ENST00000422544 ERMP1Q7Z2K6 904 aa9.46□□□□□ -0.9
PDGFC-202ENST00000422544 SH2D3CQ8N5H7 860 aa9.46□□□□□ -0.9
PDGFC-202ENST00000422544 TSTD1Q8NFU3 115 aa9.46□□□□□ -0.9
PDGFC-202ENST00000422544 TRIM58Q8NG06 486 aa9.46□□□□□ -0.9
PDGFC-202ENST00000422544 FRS2Q8WU20 508 aa9.46□□□□□ -0.9
PDGFC-202ENST00000422544 LRRN4Q8WUT4 740 aa9.46□□□□□ -0.9
PDGFC-202ENST00000422544 CD248Q9HCU0 757 aa9.46□□□□□ -0.9
PDGFC-202ENST00000422544 POLMQ9NP87 494 aaPredicted RBP9.46□□□□□ -0.9
PDGFC-202ENST00000422544 PRSS16Q9NQE7 514 aa9.46□□□□□ -0.9
PDGFC-202ENST00000422544 PRMT8Q9NR22 394 aaPredicted RBP9.46□□□□□ -0.9
PDGFC-202ENST00000422544 IPO11Q9UI26 975 aaKnown RBP9.46□□□□□ -0.9
PDGFC-202ENST00000422544 FCF1Q9Y324 198 aaKnown RBP9.46□□□□□ -0.9
PDGFC-202ENST00000422544 HEY1Q9Y5J3 304 aa9.46□□□□□ -0.9
PDGFC-202ENST00000422544 MYO18AQ92614 2054 aaKnown RBP9.46□□□□□ -0.9
PDGFC-202ENST00000422544 ATRXP46100 2492 aa9.45□□□□□ -0.9
PDGFC-202ENST00000422544 CEP295Q9C0D2 2601 aa9.45□□□□□ -0.9
PDGFC-202ENST00000422544 MIA3Q5JRA6 1907 aa9.45□□□□□ -0.9
PDGFC-202ENST00000422544 ZSCAN5CA6NGD5 496 aaPredicted RBP9.45□□□□□ -0.9
PDGFC-202ENST00000422544 BNIP3LO60238 219 aa9.45□□□□□ -0.9
PDGFC-202ENST00000422544 KIF5CO60282 957 aa9.45□□□□□ -0.9
PDGFC-202ENST00000422544 MAFKO60675 156 aa9.45□□□□□ -0.9
PDGFC-202ENST00000422544 PRAMEF11O60813 436 aa9.45□□□□□ -0.9
PDGFC-202ENST00000422544 SIN3BO75182 1162 aa9.45□□□□□ -0.9
PDGFC-202ENST00000422544 ZNF821O75541 412 aaPredicted RBP9.45□□□□□ -0.9
PDGFC-202ENST00000422544 PAPSS2O95340 614 aaPredicted RBP9.45□□□□□ -0.9
PDGFC-202ENST00000422544 APBB3O95704 486 aa9.45□□□□□ -0.9
PDGFC-202ENST00000422544 ZFXP17010 805 aaPredicted RBP9.45□□□□□ -0.9
PDGFC-202ENST00000422544 CETN2P41208 172 aa9.45□□□□□ -0.9
PDGFC-202ENST00000422544 SERPINH1P50454 418 aaKnown RBP9.45□□□□□ -0.9
PDGFC-202ENST00000422544 COPS2P61201 443 aa9.45□□□□□ -0.9
PDGFC-202ENST00000422544 GALNT2Q10471 571 aa9.45□□□□□ -0.9
PDGFC-202ENST00000422544 CAMK2GQ13555 558 aaPredicted RBP9.45□□□□□ -0.9
PDGFC-202ENST00000422544 TFDP2Q14188 446 aa9.45□□□□□ -0.9
PDGFC-202ENST00000422544 ANGPT1Q15389 498 aa9.45□□□□□ -0.9
PDGFC-202ENST00000422544 CYTH1Q15438 398 aa9.45□□□□□ -0.9
PDGFC-202ENST00000422544 PPP2R5EQ16537 467 aa9.45□□□□□ -0.9
PDGFC-202ENST00000422544 HNRNPA1L2Q32P51 320 aaKnown RBP9.45□□□□□ -0.9
PDGFC-202ENST00000422544 DCAF12L1Q5VU92 463 aa9.45□□□□□ -0.9
PDGFC-202ENST00000422544 HEATR6Q6AI08 1181 aaKnown RBP9.45□□□□□ -0.9
PDGFC-202ENST00000422544 ANO7Q6IWH7 933 aa9.45□□□□□ -0.9
PDGFC-202ENST00000422544 Q6ZVU0 165 aa9.45□□□□□ -0.9
PDGFC-202ENST00000422544 STK40Q8N2I9 435 aa9.45□□□□□ -0.9
PDGFC-202ENST00000422544 PGBD3Q8N328 593 aa9.45□□□□□ -0.9
PDGFC-202ENST00000422544 C17orf53Q8N3J3 647 aaPredicted RBP9.45□□□□□ -0.9
PDGFC-202ENST00000422544 CAMKK1Q8N5S9 505 aa9.45□□□□□ -0.9
PDGFC-202ENST00000422544 UBE2Q2Q8WVN8 375 aa9.45□□□□□ -0.9
PDGFC-202ENST00000422544 HMGB4Q8WW32 186 aa9.45□□□□□ -0.9
PDGFC-202ENST00000422544 PTPRN2Q92932 1015 aa9.45□□□□□ -0.9
PDGFC-202ENST00000422544 RMDN1Q96DB5 314 aa9.45□□□□□ -0.9
PDGFC-202ENST00000422544 DCBLD2Q96PD2 775 aa9.45□□□□□ -0.9
PDGFC-202ENST00000422544 HERPUD2Q9BSE4 406 aa9.45□□□□□ -0.9
PDGFC-202ENST00000422544 OSBPL8Q9BZF1 889 aa9.45□□□□□ -0.9
PDGFC-202ENST00000422544 SLC6A17Q9H1V8 727 aa9.45□□□□□ -0.9
PDGFC-202ENST00000422544 TNKS2Q9H2K2 1166 aa9.45□□□□□ -0.9
PDGFC-202ENST00000422544 PRDM16Q9HAZ2 1276 aa9.45□□□□□ -0.9
PDGFC-202ENST00000422544 SP110Q9HB58 689 aa9.45□□□□□ -0.9
PDGFC-202ENST00000422544 PDFQ9HBH1 243 aa9.45□□□□□ -0.9
PDGFC-202ENST00000422544 DTLQ9NZJ0 730 aa9.45□□□□□ -0.9
PDGFC-202ENST00000422544 SAE1Q9UBE0 346 aaPredicted RBP9.45□□□□□ -0.9
PDGFC-202ENST00000422544 UBA2Q9UBT2 640 aaPredicted RBP9.45□□□□□ -0.9
PDGFC-202ENST00000422544 FBXO4Q9UKT5 387 aa9.45□□□□□ -0.9
PDGFC-202ENST00000422544 KIAA1549LQ6ZVL6 1849 aa9.45□□□□□ -0.9
PDGFC-202ENST00000422544 EDDM13A0A1B0GTR0 161 aa9.44□□□□□ -0.9
PDGFC-202ENST00000422544 CXorf51AA0A1B0GTR3 108 aa9.44□□□□□ -0.9
PDGFC-202ENST00000422544 TARSL2A2RTX5 802 aaKnown RBP9.44□□□□□ -0.9
PDGFC-202ENST00000422544 GOLGA6L9A6NEM1 432 aa9.44□□□□□ -0.9
PDGFC-202ENST00000422544 KCNK3O14649 394 aa9.44□□□□□ -0.9
PDGFC-202ENST00000422544 ENC1O14682 589 aa9.44□□□□□ -0.9
PDGFC-202ENST00000422544 ZBTB24O43167 697 aaPredicted RBP9.44□□□□□ -0.9
PDGFC-202ENST00000422544 ALDH1A2O94788 518 aa9.44□□□□□ -0.9
PDGFC-202ENST00000422544 TMCC1O94876 653 aa9.44□□□□□ -0.9
PDGFC-202ENST00000422544 SP9P0CG40 484 aa9.44□□□□□ -0.9
PDGFC-202ENST00000422544 TDGF1P13385 188 aa9.44□□□□□ -0.9
PDGFC-202ENST00000422544 PECAM1P16284 738 aaPredicted RBP9.44□□□□□ -0.9
PDGFC-202ENST00000422544 GABRG2P18507 467 aa9.44□□□□□ -0.9
PDGFC-202ENST00000422544 MX2P20592 715 aa9.44□□□□□ -0.9
PDGFC-202ENST00000422544 GARSP41250 739 aaKnown RBP9.44□□□□□ -0.9
PDGFC-202ENST00000422544 FNTBP49356 437 aa9.44□□□□□ -0.9
PDGFC-202ENST00000422544 COPAP53621 1224 aa9.44□□□□□ -0.9
PDGFC-202ENST00000422544 GEMIN4P57678 1058 aaKnown RBP9.44□□□□□ -0.9
PDGFC-202ENST00000422544 IL10RBQ08334 325 aa9.44□□□□□ -0.9
PDGFC-202ENST00000422544 INO80DQ53TQ3 878 aaPredicted RBP9.44□□□□□ -0.9
PDGFC-202ENST00000422544 C22orf39Q6P5X5 142 aa9.44□□□□□ -0.9
PDGFC-202ENST00000422544 BBS12Q6ZW61 710 aa9.44□□□□□ -0.9
PDGFC-202ENST00000422544 B4GALNT4Q76KP1 1039 aa9.44□□□□□ -0.9
PDGFC-202ENST00000422544 CACUL1Q86Y37 369 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms