RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 BCKDHBP21953 392 aa16.05■□□□□ 0.16
BRAT1-202ENST00000421712 OXTRP30559 389 aa16.05■□□□□ 0.16
BRAT1-202ENST00000421712 SLC8A1P32418 973 aa16.05■□□□□ 0.16
BRAT1-202ENST00000421712 TPMTP51580 245 aa16.05■□□□□ 0.16
BRAT1-202ENST00000421712 CCZ1BP86790 482 aa16.05■□□□□ 0.16
BRAT1-202ENST00000421712 CCZ1P86791 482 aaPredicted RBP16.05■□□□□ 0.16
BRAT1-202ENST00000421712 ZBTB16Q05516 673 aa16.05■□□□□ 0.16
BRAT1-202ENST00000421712 SFSWAPQ12872 951 aaKnown RBP16.05■□□□□ 0.16
BRAT1-202ENST00000421712 CST6Q15828 149 aa16.05■□□□□ 0.16
BRAT1-202ENST00000421712 POM121L1PQ3SYA9 428 aa16.05■□□□□ 0.16
BRAT1-202ENST00000421712 CARD16Q5EG05 197 aa16.05■□□□□ 0.16
BRAT1-202ENST00000421712 FAM46CQ5VWP2 391 aa16.05■□□□□ 0.16
BRAT1-202ENST00000421712 AFMIDQ63HM1 303 aa16.05■□□□□ 0.16
BRAT1-202ENST00000421712 LPCAT2Q7L5N7 544 aa16.05■□□□□ 0.16
BRAT1-202ENST00000421712 METTL3Q86U44 580 aaKnown RBP16.05■□□□□ 0.16
BRAT1-202ENST00000421712 RFX6Q8HWS3 928 aa16.05■□□□□ 0.16
BRAT1-202ENST00000421712 CCDC50Q8IVM0 306 aa16.05■□□□□ 0.16
BRAT1-202ENST00000421712 TP53INP2Q8IXH6 220 aa16.05■□□□□ 0.16
BRAT1-202ENST00000421712 SYCE1Q8N0S2 351 aa16.05■□□□□ 0.16
BRAT1-202ENST00000421712 DEFB119Q8N690 84 aa16.05■□□□□ 0.16
BRAT1-202ENST00000421712 PCDH19Q8TAB3 1148 aa16.05■□□□□ 0.16
BRAT1-202ENST00000421712 FBXL12Q9NXK8 326 aa16.05■□□□□ 0.16
BRAT1-202ENST00000421712 IPO11Q9UI26 975 aaKnown RBP16.05■□□□□ 0.16
BRAT1-202ENST00000421712 GUCA1BQ9UMX6 200 aa16.05■□□□□ 0.16
BRAT1-202ENST00000421712 SCML1Q9UN30 329 aa16.05■□□□□ 0.16
BRAT1-202ENST00000421712 SDK1Q7Z5N4 2213 aa16.04■□□□□ 0.16
BRAT1-202ENST00000421712 EML5Q05BV3 1969 aa16.04■□□□□ 0.16
BRAT1-202ENST00000421712 CHD5Q8TDI0 1954 aa16.04■□□□□ 0.16
BRAT1-202ENST00000421712 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.04■□□□□ 0.16
BRAT1-202ENST00000421712 IGHV1OR15-9A0A0B4J2B8 117 aa16.04■□□□□ 0.16
BRAT1-202ENST00000421712 CXorf51AA0A1B0GTR3 108 aa16.04■□□□□ 0.16
BRAT1-202ENST00000421712 A0A1W2PP55 124 aa16.04■□□□□ 0.16
BRAT1-202ENST00000421712 GRID2IPA4D2P6 1211 aa16.04■□□□□ 0.16
BRAT1-202ENST00000421712 PROB1E7EW31 1015 aa16.04■□□□□ 0.16
BRAT1-202ENST00000421712 MCF2LO15068 1137 aa16.04■□□□□ 0.16
BRAT1-202ENST00000421712 PRAMEF11O60813 436 aa16.04■□□□□ 0.16
BRAT1-202ENST00000421712 PALMO75781 387 aa16.04■□□□□ 0.16
BRAT1-202ENST00000421712 ZRANB2O95218 330 aaKnown RBP eCLIP16.04■□□□□ 0.161e-5■■■■□ 25.7
BRAT1-202ENST00000421712 CD160O95971 181 aa16.04■□□□□ 0.16
BRAT1-202ENST00000421712 ADH1BP00325 375 aa16.04■□□□□ 0.16
BRAT1-202ENST00000421712 CD6P30203 668 aa16.04■□□□□ 0.16
BRAT1-202ENST00000421712 CHRNA3P32297 505 aa16.04■□□□□ 0.16
BRAT1-202ENST00000421712 RHOAP61586 193 aa16.04■□□□□ 0.16
BRAT1-202ENST00000421712 SNRPD1P62314 119 aaKnown RBP16.04■□□□□ 0.16
BRAT1-202ENST00000421712 RPL6Q02878 288 aaKnown RBP16.04■□□□□ 0.16
BRAT1-202ENST00000421712 INO80DQ53TQ3 878 aaPredicted RBP16.04■□□□□ 0.16
BRAT1-202ENST00000421712 NCBP2-AS2Q69YL0 99 aa16.04■□□□□ 0.16
BRAT1-202ENST00000421712 DPY19L3Q6ZPD9 716 aa16.04■□□□□ 0.16
BRAT1-202ENST00000421712 ARHGAP36Q6ZRI8 547 aa16.04■□□□□ 0.16
BRAT1-202ENST00000421712 PEX26Q7Z412 305 aa16.04■□□□□ 0.16
BRAT1-202ENST00000421712 TMEFF1Q8IYR6 380 aa16.04■□□□□ 0.16
BRAT1-202ENST00000421712 HDDC3Q8N4P3 179 aa16.04■□□□□ 0.16
BRAT1-202ENST00000421712 ATPAF2Q8N5M1 289 aa16.04■□□□□ 0.16
BRAT1-202ENST00000421712 OR2A12Q8NGT7 310 aa16.04■□□□□ 0.16
BRAT1-202ENST00000421712 PIP4K2CQ8TBX8 421 aa16.04■□□□□ 0.16
BRAT1-202ENST00000421712 GRIN3AQ8TCU5 1115 aa16.04■□□□□ 0.16
BRAT1-202ENST00000421712 NSMCE1Q8WV22 266 aa16.04■□□□□ 0.16
BRAT1-202ENST00000421712 CASKIN2Q8WXE0 1202 aa16.04■□□□□ 0.16
BRAT1-202ENST00000421712 ISG20Q96AZ6 181 aaKnown RBP16.04■□□□□ 0.16
BRAT1-202ENST00000421712 TOE1Q96GM8 510 aaKnown RBP16.04■□□□□ 0.16
BRAT1-202ENST00000421712 RNF157Q96PX1 679 aa16.04■□□□□ 0.16
BRAT1-202ENST00000421712 PABPC3Q9H361 631 aaKnown RBP16.04■□□□□ 0.16
BRAT1-202ENST00000421712 USP36Q9P275 1121 aaKnown RBP16.04■□□□□ 0.16
BRAT1-202ENST00000421712 NCDNQ9UBB6 729 aa16.04■□□□□ 0.16
BRAT1-202ENST00000421712 HECAQ9UBI9 543 aaPredicted RBP16.04■□□□□ 0.16
BRAT1-202ENST00000421712 IL36AQ9UHA7 158 aa16.04■□□□□ 0.16
BRAT1-202ENST00000421712 MBD1Q9UIS9 605 aaPredicted RBP16.04■□□□□ 0.16
BRAT1-202ENST00000421712 GMEB2Q9UKD1 530 aa16.04■□□□□ 0.16
BRAT1-202ENST00000421712 AMFRQ9UKV5 643 aa16.04■□□□□ 0.16
BRAT1-202ENST00000421712 ABCA7Q8IZY2 2146 aa16.04■□□□□ 0.16
BRAT1-202ENST00000421712 KPNA3O00505 521 aaPredicted RBP16.03■□□□□ 0.16
BRAT1-202ENST00000421712 APOL1O14791 398 aa16.03■□□□□ 0.16
BRAT1-202ENST00000421712 ALOX15BO15296 676 aa16.03■□□□□ 0.16
BRAT1-202ENST00000421712 RNASEH2AO75792 299 aaKnown RBP16.03■□□□□ 0.16
BRAT1-202ENST00000421712 PRNPP04156 253 aa16.03■□□□□ 0.16
BRAT1-202ENST00000421712 C5AR1P21730 350 aa16.03■□□□□ 0.16
BRAT1-202ENST00000421712 DHPSP49366 369 aaPredicted RBP16.03■□□□□ 0.16
BRAT1-202ENST00000421712 IL10RBQ08334 325 aa16.03■□□□□ 0.16
BRAT1-202ENST00000421712 LLGL1Q15334 1064 aa16.03■□□□□ 0.16
BRAT1-202ENST00000421712 PLK5Q496M5 336 aa16.03■□□□□ 0.16
BRAT1-202ENST00000421712 ARSIQ5FYB1 569 aa16.03■□□□□ 0.16
BRAT1-202ENST00000421712 ATXN7L2Q5T6C5 722 aaPredicted RBP16.03■□□□□ 0.16
BRAT1-202ENST00000421712 KAZNQ674X7 775 aa16.03■□□□□ 0.16
BRAT1-202ENST00000421712 RCOR2Q8IZ40 523 aa16.03■□□□□ 0.16
BRAT1-202ENST00000421712 RNF10Q8N5U6 811 aaKnown RBP16.03■□□□□ 0.16
BRAT1-202ENST00000421712 SUMF1Q8NBK3 374 aa16.03■□□□□ 0.16
BRAT1-202ENST00000421712 CHST14Q8NCH0 376 aa16.03■□□□□ 0.16
BRAT1-202ENST00000421712 KRT35Q92764 455 aa16.03■□□□□ 0.16
BRAT1-202ENST00000421712 FAF2Q96CS3 445 aa16.03■□□□□ 0.16
BRAT1-202ENST00000421712 ZNF830Q96NB3 372 aaPredicted RBP16.03■□□□□ 0.16
BRAT1-202ENST00000421712 HEPHQ9BQS7 1158 aa16.03■□□□□ 0.16
BRAT1-202ENST00000421712 CINPQ9BW66 212 aaPredicted RBP16.03■□□□□ 0.16
BRAT1-202ENST00000421712 DUSP15Q9H1R2 295 aaPredicted RBP16.03■□□□□ 0.16
BRAT1-202ENST00000421712 ZDHHC6Q9H6R6 413 aa16.03■□□□□ 0.16
BRAT1-202ENST00000421712 LZTFL1Q9NQ48 299 aa16.03■□□□□ 0.16
BRAT1-202ENST00000421712 DYRK4Q9NR20 520 aa16.03■□□□□ 0.16
BRAT1-202ENST00000421712 THADAQ6YHU6 1953 aa16.02■□□□□ 0.16
BRAT1-202ENST00000421712 FAM47DPA6NHR8 397 aa16.02■□□□□ 0.16
BRAT1-202ENST00000421712 C3orf70A6NLC5 250 aaPredicted RBP16.02■□□□□ 0.16
BRAT1-202ENST00000421712 KRIT1O00522 736 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms