RNA–Protein interactions for RNA: ENST00000421124.6

DDR1-233, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-233ENST00000421124 TTC31Q49AM3 519 aaPredicted RBP18.94■□□□□ 0.62
DDR1-233ENST00000421124 INO80DQ53TQ3 878 aaPredicted RBP18.94■□□□□ 0.62
DDR1-233ENST00000421124 NCBP2-AS2Q69YL0 99 aa18.94■□□□□ 0.62
DDR1-233ENST00000421124 FAM160A2Q8N612 972 aaPredicted RBP18.94■□□□□ 0.62
DDR1-233ENST00000421124 LRRC57Q8N9N7 239 aa18.94■□□□□ 0.62
DDR1-233ENST00000421124 OR2A12Q8NGT7 310 aa18.94■□□□□ 0.62
DDR1-233ENST00000421124 RNF157Q96PX1 679 aa18.94■□□□□ 0.62
DDR1-233ENST00000421124 PDFQ9HBH1 243 aa18.94■□□□□ 0.62
DDR1-233ENST00000421124 CD93Q9NPY3 652 aa18.94■□□□□ 0.62
DDR1-233ENST00000421124 UBA2Q9UBT2 640 aaPredicted RBP18.94■□□□□ 0.62
DDR1-233ENST00000421124 SCML1Q9UN30 329 aa18.94■□□□□ 0.62
DDR1-233ENST00000421124 SMG5Q9UPR3 1016 aaKnown RBP18.94■□□□□ 0.62
DDR1-233ENST00000421124 VPS13AQ96RL7 3174 aa18.93■□□□□ 0.62
DDR1-233ENST00000421124 J3KR12 359 aa18.93■□□□□ 0.62
DDR1-233ENST00000421124 KRT86O43790 486 aa18.93■□□□□ 0.62
DDR1-233ENST00000421124 ZNF821O75541 412 aaPredicted RBP18.93■□□□□ 0.62
DDR1-233ENST00000421124 TMCC1O94876 653 aa18.93■□□□□ 0.62
DDR1-233ENST00000421124 ADH1BP00325 375 aa18.93■□□□□ 0.62
DDR1-233ENST00000421124 LMNAP02545 664 aaKnown RBP18.93■□□□□ 0.62
DDR1-233ENST00000421124 PTMAP06454 111 aaKnown RBP18.93■□□□□ 0.62
DDR1-233ENST00000421124 CCDC175P0C221 793 aa18.93■□□□□ 0.62
DDR1-233ENST00000421124 BCKDHBP21953 392 aa18.93■□□□□ 0.62
DDR1-233ENST00000421124 PSMD8P48556 350 aa18.93■□□□□ 0.62
DDR1-233ENST00000421124 TPMTP51580 245 aa18.93■□□□□ 0.62
DDR1-233ENST00000421124 IL10RBQ08334 325 aa18.93■□□□□ 0.62
DDR1-233ENST00000421124 SLC36A4Q6YBV0 504 aa18.93■□□□□ 0.62
DDR1-233ENST00000421124 KBTBD6Q86V97 674 aa18.93■□□□□ 0.62
DDR1-233ENST00000421124 TP53INP2Q8IXH6 220 aa18.93■□□□□ 0.62
DDR1-233ENST00000421124 PQLC3Q8N755 202 aa18.93■□□□□ 0.62
DDR1-233ENST00000421124 FRMD1Q8N878 549 aa18.93■□□□□ 0.62
DDR1-233ENST00000421124 SUMF1Q8NBK3 374 aa18.93■□□□□ 0.62
DDR1-233ENST00000421124 RNF25Q96BH1 459 aaPredicted RBP18.93■□□□□ 0.62
DDR1-233ENST00000421124 PDLIM2Q96JY6 352 aa18.93■□□□□ 0.62
DDR1-233ENST00000421124 PABPC3Q9H361 631 aaKnown RBP18.93■□□□□ 0.62
DDR1-233ENST00000421124 SP110Q9HB58 689 aa18.93■□□□□ 0.62
DDR1-233ENST00000421124 IPO11Q9UI26 975 aaKnown RBP18.93■□□□□ 0.62
DDR1-233ENST00000421124 MBD1Q9UIS9 605 aaPredicted RBP18.93■□□□□ 0.62
DDR1-233ENST00000421124 MID1O15344 667 aa18.92■□□□□ 0.62
DDR1-233ENST00000421124 MAP3K13O43283 966 aa18.92■□□□□ 0.62
DDR1-233ENST00000421124 MFSD11O43934 449 aa18.92■□□□□ 0.62
DDR1-233ENST00000421124 PALMO75781 387 aa18.92■□□□□ 0.62
DDR1-233ENST00000421124 IL1BP01584 269 aa18.92■□□□□ 0.62
DDR1-233ENST00000421124 IGLV3-19P01714 112 aa18.92■□□□□ 0.62
DDR1-233ENST00000421124 OXTRP30559 389 aa18.92■□□□□ 0.62
DDR1-233ENST00000421124 SLC8A1P32418 973 aa18.92■□□□□ 0.62
DDR1-233ENST00000421124 CTNNA1P35221 906 aaKnown RBP18.92■□□□□ 0.62
DDR1-233ENST00000421124 DNA2P51530 1060 aa18.92■□□□□ 0.62
DDR1-233ENST00000421124 SFSWAPQ12872 951 aaKnown RBP18.92■□□□□ 0.62
DDR1-233ENST00000421124 ELF2Q15723 593 aa18.92■□□□□ 0.62
DDR1-233ENST00000421124 PLK5Q496M5 336 aa18.92■□□□□ 0.62
DDR1-233ENST00000421124 CARD16Q5EG05 197 aa18.92■□□□□ 0.62
DDR1-233ENST00000421124 MFSD7Q6UXD7 560 aa18.92■□□□□ 0.62
DDR1-233ENST00000421124 DPY19L3Q6ZPD9 716 aa18.92■□□□□ 0.62
DDR1-233ENST00000421124 ARHGAP36Q6ZRI8 547 aa18.92■□□□□ 0.62
DDR1-233ENST00000421124 PLPP6Q8IY26 295 aa18.92■□□□□ 0.62
DDR1-233ENST00000421124 KATNAL2Q8IYT4 538 aa18.92■□□□□ 0.62
DDR1-233ENST00000421124 SYCE1Q8N0S2 351 aa18.92■□□□□ 0.62
DDR1-233ENST00000421124 RNF10Q8N5U6 811 aaKnown RBP18.92■□□□□ 0.62
DDR1-233ENST00000421124 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.92■□□□□ 0.62
DDR1-233ENST00000421124 ZC3H10Q96K80 434 aaKnown RBP18.92■□□□□ 0.62
DDR1-233ENST00000421124 MAK16Q9BXY0 300 aaKnown RBP18.92■□□□□ 0.62
DDR1-233ENST00000421124 TM6SF2Q9BZW4 377 aa18.92■□□□□ 0.62
DDR1-233ENST00000421124 DUSP15Q9H1R2 295 aaPredicted RBP18.92■□□□□ 0.62
DDR1-233ENST00000421124 TNRC6BQ9UPQ9 1833 aaKnown RBP18.92■□□□□ 0.62
DDR1-233ENST00000421124 RALGAPA1Q6GYQ0 2036 aa18.91■□□□□ 0.62
DDR1-233ENST00000421124 NUMA1Q14980 2115 aa18.91■□□□□ 0.62
DDR1-233ENST00000421124 C1QTNF3-AMACRE9PGA6 284 aa18.91■□□□□ 0.62
DDR1-233ENST00000421124 RHOBTB1O94844 696 aa18.91■□□□□ 0.62
DDR1-233ENST00000421124 GSRP00390 522 aa18.91■□□□□ 0.62
DDR1-233ENST00000421124 C5AR1P21730 350 aa18.91■□□□□ 0.62
DDR1-233ENST00000421124 CTNNA2P26232 953 aa18.91■□□□□ 0.62
DDR1-233ENST00000421124 CD6P30203 668 aa18.91■□□□□ 0.62
DDR1-233ENST00000421124 CHRNA3P32297 505 aa18.91■□□□□ 0.62
DDR1-233ENST00000421124 MARCKSL1P49006 195 aa18.91■□□□□ 0.62
DDR1-233ENST00000421124 RHOAP61586 193 aa18.91■□□□□ 0.62
DDR1-233ENST00000421124 SNRPD1P62314 119 aaKnown RBP18.91■□□□□ 0.62
DDR1-233ENST00000421124 LPAL2Q16609 132 aa18.91■□□□□ 0.62
DDR1-233ENST00000421124 FAM46CQ5VWP2 391 aa18.91■□□□□ 0.62
DDR1-233ENST00000421124 LAIR1Q6GTX8 287 aa18.91■□□□□ 0.62
DDR1-233ENST00000421124 USP30Q70CQ3 517 aa18.91■□□□□ 0.62
DDR1-233ENST00000421124 LRRC49Q8IUZ0 686 aa18.91■□□□□ 0.62
DDR1-233ENST00000421124 ATPAF2Q8N5M1 289 aa18.91■□□□□ 0.62
DDR1-233ENST00000421124 CHST14Q8NCH0 376 aa18.91■□□□□ 0.62
DDR1-233ENST00000421124 OR2AP1Q8NGE2 309 aa18.91■□□□□ 0.62
DDR1-233ENST00000421124 PIP4K2CQ8TBX8 421 aa18.91■□□□□ 0.62
DDR1-233ENST00000421124 KRT35Q92764 455 aa18.91■□□□□ 0.62
DDR1-233ENST00000421124 RBM41Q96IZ5 413 aaKnown RBP18.91■□□□□ 0.62
DDR1-233ENST00000421124 IL36AQ9UHA7 158 aa18.91■□□□□ 0.62
DDR1-233ENST00000421124 AMFRQ9UKV5 643 aa18.91■□□□□ 0.62
DDR1-233ENST00000421124 PPM1HQ9ULR3 514 aa18.91■□□□□ 0.62
DDR1-233ENST00000421124 GUCA1BQ9UMX6 200 aa18.91■□□□□ 0.62
DDR1-233ENST00000421124 NCKAP1Q9Y2A7 1128 aa18.91■□□□□ 0.62
DDR1-233ENST00000421124 PCDHA3Q9Y5H8 950 aa18.91■□□□□ 0.62
DDR1-233ENST00000421124 ANKRD36A6QL64 1941 aa18.9■□□□□ 0.62
DDR1-233ENST00000421124 CCDC66A2RUB6 948 aa18.9■□□□□ 0.62
DDR1-233ENST00000421124 PRR23AA6NEV1 266 aa18.9■□□□□ 0.62
DDR1-233ENST00000421124 APOL1O14791 398 aa18.9■□□□□ 0.62
DDR1-233ENST00000421124 NDUFS2O75306 463 aa18.9■□□□□ 0.62
DDR1-233ENST00000421124 ZRANB2O95218 330 aaKnown RBP eCLIP18.9■□□□□ 0.62
DDR1-233ENST00000421124 PRNPP04156 253 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms