RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 ACTL7BQ9Y614 415 aa21.33■■□□□ 1.01
GPC1-202ENST00000420138 GMNCA6NCL1 334 aa21.32■■□□□ 1
GPC1-202ENST00000420138 FAM159BA6NKW6 160 aa21.32■■□□□ 1
GPC1-202ENST00000420138 PSMD3O43242 534 aa21.32■■□□□ 1
GPC1-202ENST00000420138 CLASP2O75122 1294 aaKnown RBP21.32■■□□□ 1
GPC1-202ENST00000420138 MYL4P12829 197 aa21.32■■□□□ 1
GPC1-202ENST00000420138 PGAM1P18669 254 aa21.32■■□□□ 1
GPC1-202ENST00000420138 SEC24CP53992 1094 aa21.32■■□□□ 1
GPC1-202ENST00000420138 NIPAL4Q0D2K0 466 aa21.32■■□□□ 1
GPC1-202ENST00000420138 CERCAMQ5T4B2 595 aa21.32■■□□□ 1
GPC1-202ENST00000420138 PPP2R2DQ66LE6 453 aa21.32■■□□□ 1
GPC1-202ENST00000420138 CCNJLQ8IV13 435 aa21.32■■□□□ 1
GPC1-202ENST00000420138 ELMOD1Q8N336 334 aa21.32■■□□□ 1
GPC1-202ENST00000420138 CCT8L2Q96SF2 557 aa21.32■■□□□ 1
GPC1-202ENST00000420138 SELENOSQ9BQE4 189 aa21.32■■□□□ 1
GPC1-202ENST00000420138 SLC25A51Q9H1U9 297 aa21.32■■□□□ 1
GPC1-202ENST00000420138 NT5MQ9NPB1 228 aa21.32■■□□□ 1
GPC1-202ENST00000420138 ASAH2Q9NR71 780 aa21.32■■□□□ 1
GPC1-202ENST00000420138 DENND4CQ5VZ89 1909 aa21.32■■□□□ 1
GPC1-202ENST00000420138 A0A1B0GVM2 712 aa21.32■■□□□ 1
GPC1-202ENST00000420138 TCAF2A6NFQ2 919 aa21.32■■□□□ 1
GPC1-202ENST00000420138 MOSPD3O75425 235 aa21.32■■□□□ 1
GPC1-202ENST00000420138 ANXA9O76027 345 aa21.32■■□□□ 1
GPC1-202ENST00000420138 FAM107AO95990 144 aa21.32■■□□□ 1
GPC1-202ENST00000420138 C1RP00736 705 aa21.32■■□□□ 1
GPC1-202ENST00000420138 EPCAMP16422 314 aa21.32■■□□□ 1
GPC1-202ENST00000420138 MSH2P43246 934 aa21.32■■□□□ 1
GPC1-202ENST00000420138 NUMBP49757 651 aa21.32■■□□□ 1
GPC1-202ENST00000420138 MPP2Q14168 576 aa21.32■■□□□ 1
GPC1-202ENST00000420138 NAPEPLDQ6IQ20 393 aa21.32■■□□□ 1
GPC1-202ENST00000420138 CXorf57Q6NSI4 855 aaKnown RBP21.32■■□□□ 1
GPC1-202ENST00000420138 CASC4Q6P4E1 433 aa21.32■■□□□ 1
GPC1-202ENST00000420138 RTL10Q7L3V2 364 aa21.32■■□□□ 1
GPC1-202ENST00000420138 SRRM1Q8IYB3 904 aaKnown RBP21.32■■□□□ 1
GPC1-202ENST00000420138 UNC5BQ8IZJ1 945 aa21.32■■□□□ 1
GPC1-202ENST00000420138 IMP4Q96G21 291 aaKnown RBP21.32■■□□□ 1
GPC1-202ENST00000420138 DDX50Q9BQ39 737 aaKnown RBP21.32■■□□□ 1
GPC1-202ENST00000420138 NAT9Q9BTE0 207 aa21.32■■□□□ 1
GPC1-202ENST00000420138 LAMA3Q16787 3333 aa21.31■■□□□ 1
GPC1-202ENST00000420138 CKMP06732 381 aa21.31■■□□□ 1
GPC1-202ENST00000420138 MMP2P08253 660 aa21.31■■□□□ 1
GPC1-202ENST00000420138 MAXP61244 160 aa21.31■■□□□ 1
GPC1-202ENST00000420138 NR1H3Q13133 447 aa21.31■■□□□ 1
GPC1-202ENST00000420138 CRYMQ14894 314 aa21.31■■□□□ 1
GPC1-202ENST00000420138 PDE12Q6L8Q7 609 aaKnown RBP21.31■■□□□ 1
GPC1-202ENST00000420138 KDELC1Q6UW63 502 aa21.31■■□□□ 1
GPC1-202ENST00000420138 ZNF354CQ86Y25 554 aa21.31■■□□□ 1
GPC1-202ENST00000420138 DNAAF3Q8N9W5 541 aa21.31■■□□□ 1
GPC1-202ENST00000420138 SHKBP1Q8TBC3 707 aa21.31■■□□□ 1
GPC1-202ENST00000420138 ZNF473Q8WTR7 871 aaKnown RBP21.31■■□□□ 1
GPC1-202ENST00000420138 TADA1Q96BN2 335 aa21.31■■□□□ 1
GPC1-202ENST00000420138 MRGPRX2Q96LB1 330 aa21.31■■□□□ 1
GPC1-202ENST00000420138 FCRL3Q96P31 734 aaPredicted RBP21.31■■□□□ 1
GPC1-202ENST00000420138 KIF9Q9HAQ2 790 aa21.31■■□□□ 1
GPC1-202ENST00000420138 BFARQ9NZS9 450 aa21.31■■□□□ 1
GPC1-202ENST00000420138 DNMT3BQ9UBC3 853 aaKnown RBP21.31■■□□□ 1
GPC1-202ENST00000420138 A0A1W2PPM1 405 aa21.3■■□□□ 1
GPC1-202ENST00000420138 ILVBLA1L0T0 632 aa21.3■■□□□ 1
GPC1-202ENST00000420138 MUSKO15146 869 aa21.3■■□□□ 1
GPC1-202ENST00000420138 CHN1P15882 459 aa21.3■■□□□ 1
GPC1-202ENST00000420138 GEMP55040 296 aa21.3■■□□□ 1
GPC1-202ENST00000420138 CDH17Q12864 832 aa21.3■■□□□ 1
GPC1-202ENST00000420138 LBRQ14739 615 aaKnown RBP21.3■■□□□ 1
GPC1-202ENST00000420138 HTR3DQ70Z44 454 aa21.3■■□□□ 1
GPC1-202ENST00000420138 LINC00523Q86TU6 105 aa21.3■■□□□ 1
GPC1-202ENST00000420138 SETD3Q86TU7 594 aaPredicted RBP21.3■■□□□ 1
GPC1-202ENST00000420138 TMEM135Q86UB9 458 aa21.3■■□□□ 1
GPC1-202ENST00000420138 IPMKQ8NFU5 416 aa21.3■■□□□ 1
GPC1-202ENST00000420138 ARRDC2Q8TBH0 407 aa21.3■■□□□ 1
GPC1-202ENST00000420138 TCEAL4Q96EI5 215 aa21.3■■□□□ 1
GPC1-202ENST00000420138 PPP1R2P1Q96PQ5 205 aa21.3■■□□□ 1
GPC1-202ENST00000420138 TBL1YQ9BQ87 522 aa21.3■■□□□ 1
GPC1-202ENST00000420138 ACE2Q9BYF1 805 aaPredicted RBP21.3■■□□□ 1
GPC1-202ENST00000420138 SLC28A3Q9HAS3 691 aa21.3■■□□□ 1
GPC1-202ENST00000420138 ACTL7AQ9Y615 435 aa21.3■■□□□ 1
GPC1-202ENST00000420138 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP21.29■■□□□ 1
GPC1-202ENST00000420138 UGT1A9O60656 530 aa21.29■■□□□ 1
GPC1-202ENST00000420138 FAM155BO75949 473 aa21.29■■□□□ 1
GPC1-202ENST00000420138 BRAFP15056 766 aa21.29■■□□□ 1
GPC1-202ENST00000420138 TPH1P17752 444 aa21.29■■□□□ 1
GPC1-202ENST00000420138 NPY2RP49146 381 aa21.29■■□□□ 1
GPC1-202ENST00000420138 ZNF177Q13360 481 aaPredicted RBP21.29■■□□□ 1
GPC1-202ENST00000420138 TMCO4Q5TGY1 634 aa21.29■■□□□ 1
GPC1-202ENST00000420138 TTC39BQ5VTQ0 682 aaPredicted RBP21.29■■□□□ 1
GPC1-202ENST00000420138 CES3Q6UWW8 571 aa21.29■■□□□ 1
GPC1-202ENST00000420138 RANBP10Q6VN20 620 aa21.29■■□□□ 1
GPC1-202ENST00000420138 LRRC6Q86X45 466 aa21.29■■□□□ 1
GPC1-202ENST00000420138 PPM1NQ8N819 430 aa21.29■■□□□ 1
GPC1-202ENST00000420138 TTC17Q96AE7 1141 aa21.29■■□□□ 1
GPC1-202ENST00000420138 UGT1A7Q9HAW7 530 aa21.29■■□□□ 1
GPC1-202ENST00000420138 UGT1A10Q9HAW8 530 aa21.29■■□□□ 1
GPC1-202ENST00000420138 UGT1A8Q9HAW9 530 aa21.29■■□□□ 1
GPC1-202ENST00000420138 MYO7AQ13402 2215 aa21.29■■□□□ 1
GPC1-202ENST00000420138 TNRC18O15417 2968 aaPredicted RBP21.29■■□□□ 1
GPC1-202ENST00000420138 TRAV19A0A0A6YYK7 116 aa21.29■■□□□ 1
GPC1-202ENST00000420138 TMEM120BA0PK00 339 aa21.29■■□□□ 1
GPC1-202ENST00000420138 KDELR3O43731 214 aa21.29■■□□□ 1
GPC1-202ENST00000420138 PFKLP17858 780 aa21.29■■□□□ 1
GPC1-202ENST00000420138 GLDCP23378 1020 aa21.29■■□□□ 1
GPC1-202ENST00000420138 HOXA9P31269 272 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms