RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 BAP1Q92560 729 aa11.29□□□□□ -0.6
SSBP3-206ENST00000420121 ACE2Q9BYF1 805 aaPredicted RBP11.29□□□□□ -0.6
SSBP3-206ENST00000420121 OSBPL2Q9H1P3 480 aa11.29□□□□□ -0.6
SSBP3-206ENST00000420121 ADAM22Q9P0K1 906 aa11.29□□□□□ -0.6
SSBP3-206ENST00000420121 OR12D3Q9UGF7 316 aa11.29□□□□□ -0.6
SSBP3-206ENST00000420121 WASF2Q9Y6W5 498 aa11.29□□□□□ -0.6
SSBP3-206ENST00000420121 LRRK1Q38SD2 2015 aa11.29□□□□□ -0.6
SSBP3-206ENST00000420121 ITPR1Q14643 2758 aa11.28□□□□□ -0.6
SSBP3-206ENST00000420121 GOLGA4Q13439 2230 aaKnown RBP11.28□□□□□ -0.6
SSBP3-206ENST00000420121 TBC1D3DA0A087WVF3 549 aa11.28□□□□□ -0.6
SSBP3-206ENST00000420121 TBC1D3IA0A087WXS9 549 aa11.28□□□□□ -0.6
SSBP3-206ENST00000420121 TBC1D3EA0A087X179 549 aa11.28□□□□□ -0.6
SSBP3-206ENST00000420121 TBC1D3KA0A087X1G2 549 aa11.28□□□□□ -0.6
SSBP3-206ENST00000420121 TBC1D3FA6NER0 549 aaPredicted RBP11.28□□□□□ -0.6
SSBP3-206ENST00000420121 SIGLEC16A6NMB1 481 aa11.28□□□□□ -0.6
SSBP3-206ENST00000420121 TBC1D3LB9A6J9 549 aa11.28□□□□□ -0.6
SSBP3-206ENST00000420121 C1QTNF3-AMACRE9PGA6 284 aa11.28□□□□□ -0.6
SSBP3-206ENST00000420121 GOLGA6L22H0YM25 854 aa11.28□□□□□ -0.6
SSBP3-206ENST00000420121 BNIP3LO60238 219 aa11.28□□□□□ -0.6
SSBP3-206ENST00000420121 LRIG2O94898 1065 aa11.28□□□□□ -0.6
SSBP3-206ENST00000420121 ATXN1LP0C7T5 689 aaKnown RBP11.28□□□□□ -0.6
SSBP3-206ENST00000420121 TBC1D3HP0C7X1 549 aa11.28□□□□□ -0.6
SSBP3-206ENST00000420121 KRT3P12035 628 aa11.28□□□□□ -0.6
SSBP3-206ENST00000420121 ACVRL1P37023 503 aa11.28□□□□□ -0.6
SSBP3-206ENST00000420121 NSFP46459 744 aaKnown RBP11.28□□□□□ -0.6
SSBP3-206ENST00000420121 SERPINH1P50454 418 aaKnown RBP11.28□□□□□ -0.6
SSBP3-206ENST00000420121 NXPH1P58417 271 aa11.28□□□□□ -0.6
SSBP3-206ENST00000420121 IL9RQ01113 521 aa11.28□□□□□ -0.6
SSBP3-206ENST00000420121 ANO6Q4KMQ2 910 aa11.28□□□□□ -0.6
SSBP3-206ENST00000420121 FAM46CQ5VWP2 391 aa11.28□□□□□ -0.6
SSBP3-206ENST00000420121 E4F1Q66K89 784 aaPredicted RBP11.28□□□□□ -0.6
SSBP3-206ENST00000420121 TBC1D3GQ6DHY5 549 aa11.28□□□□□ -0.6
SSBP3-206ENST00000420121 TBC1D3CQ6IPX1 549 aa11.28□□□□□ -0.6
SSBP3-206ENST00000420121 NAPEPLDQ6IQ20 393 aa11.28□□□□□ -0.6
SSBP3-206ENST00000420121 DPY19L3Q6ZPD9 716 aa11.28□□□□□ -0.6
SSBP3-206ENST00000420121 KANSL1Q7Z3B3 1105 aa11.28□□□□□ -0.6
SSBP3-206ENST00000420121 IRF2BP2Q7Z5L9 587 aa11.28□□□□□ -0.6
SSBP3-206ENST00000420121 ADAT2Q7Z6V5 191 aaKnown RBP11.28□□□□□ -0.6
SSBP3-206ENST00000420121 SPATS2Q86XZ4 545 aaKnown RBP11.28□□□□□ -0.6
SSBP3-206ENST00000420121 DRC7Q8IY82 874 aa11.28□□□□□ -0.6
SSBP3-206ENST00000420121 TBC1D3Q8IZP1 549 aaPredicted RBP11.28□□□□□ -0.6
SSBP3-206ENST00000420121 TMIEQ8NEW7 156 aa11.28□□□□□ -0.6
SSBP3-206ENST00000420121 RHBDD1Q8TEB9 315 aa11.28□□□□□ -0.6
SSBP3-206ENST00000420121 FAM172AQ8WUF8 416 aa11.28□□□□□ -0.6
SSBP3-206ENST00000420121 ARHGEF2Q92974 986 aaKnown RBP11.28□□□□□ -0.6
SSBP3-206ENST00000420121 NTAN1Q96AB6 310 aa11.28□□□□□ -0.6
SSBP3-206ENST00000420121 SERAC1Q96JX3 654 aa11.28□□□□□ -0.6
SSBP3-206ENST00000420121 ELF4Q99607 663 aaPredicted RBP11.28□□□□□ -0.6
SSBP3-206ENST00000420121 AGPAT1Q99943 283 aa11.28□□□□□ -0.6
SSBP3-206ENST00000420121 BPIFA3Q9BQP9 254 aa11.28□□□□□ -0.6
SSBP3-206ENST00000420121 FUCA2Q9BTY2 467 aa11.28□□□□□ -0.6
SSBP3-206ENST00000420121 TNKS2Q9H2K2 1166 aa11.28□□□□□ -0.6
SSBP3-206ENST00000420121 NOL6Q9H6R4 1146 aaKnown RBP11.28□□□□□ -0.6
SSBP3-206ENST00000420121 TMEM248Q9NWD8 314 aa11.28□□□□□ -0.6
SSBP3-206ENST00000420121 ZMIZ1Q9ULJ6 1067 aa11.28□□□□□ -0.6
SSBP3-206ENST00000420121 TPX2Q9ULW0 747 aaKnown RBP11.28□□□□□ -0.6
SSBP3-206ENST00000420121 PCDHB9Q9Y5E1 797 aa11.28□□□□□ -0.6
SSBP3-206ENST00000420121 MYLKQ15746 1914 aa11.28□□□□□ -0.6
SSBP3-206ENST00000420121 ANKRD36A6QL64 1941 aa11.27□□□□□ -0.6
SSBP3-206ENST00000420121 LAMA5O15230 3695 aa11.27□□□□□ -0.6
SSBP3-206ENST00000420121 CBX4O00257 560 aa11.27□□□□□ -0.61
SSBP3-206ENST00000420121 CCP110O43303 1012 aa11.27□□□□□ -0.61
SSBP3-206ENST00000420121 CALB1P05937 261 aa11.27□□□□□ -0.61
SSBP3-206ENST00000420121 RHOQP17081 205 aa11.27□□□□□ -0.61
SSBP3-206ENST00000420121 CDK11BP21127 795 aaKnown RBP11.27□□□□□ -0.61
SSBP3-206ENST00000420121 GPD1P21695 349 aa11.27□□□□□ -0.61
SSBP3-206ENST00000420121 MAT2AP31153 395 aaKnown RBP11.27□□□□□ -0.61
SSBP3-206ENST00000420121 C21orf59P57076 290 aa11.27□□□□□ -0.61
SSBP3-206ENST00000420121 RPL7AP62424 266 aaKnown RBP11.27□□□□□ -0.61
SSBP3-206ENST00000420121 OGDHQ02218 1023 aa11.27□□□□□ -0.61
SSBP3-206ENST00000420121 SCAPQ12770 1279 aa11.27□□□□□ -0.61
SSBP3-206ENST00000420121 ARSIQ5FYB1 569 aa11.27□□□□□ -0.61
SSBP3-206ENST00000420121 LRSAM1Q6UWE0 723 aa11.27□□□□□ -0.61
SSBP3-206ENST00000420121 GATAD2AQ86YP4 633 aa11.27□□□□□ -0.61
SSBP3-206ENST00000420121 PYROXD2Q8N2H3 581 aa11.27□□□□□ -0.61
SSBP3-206ENST00000420121 MFSD2AQ8NA29 543 aa11.27□□□□□ -0.61
SSBP3-206ENST00000420121 TMEM145Q8NBT3 493 aa11.27□□□□□ -0.61
SSBP3-206ENST00000420121 ANKRD20A12PQ8NF67 263 aa11.27□□□□□ -0.61
SSBP3-206ENST00000420121 SAP25Q8TEE9 199 aa11.27□□□□□ -0.61
SSBP3-206ENST00000420121 PCMTD1Q96MG8 357 aaPredicted RBP11.27□□□□□ -0.61
SSBP3-206ENST00000420121 SPON2Q9BUD6 331 aa11.27□□□□□ -0.61
SSBP3-206ENST00000420121 CEP44Q9C0F1 390 aa11.27□□□□□ -0.61
SSBP3-206ENST00000420121 PREBQ9HCU5 417 aa11.27□□□□□ -0.61
SSBP3-206ENST00000420121 ATP13A1Q9HD20 1204 aa11.27□□□□□ -0.61
SSBP3-206ENST00000420121 AASDHPPTQ9NRN7 309 aa11.27□□□□□ -0.61
SSBP3-206ENST00000420121 TAS2R14Q9NYV8 317 aa11.27□□□□□ -0.61
SSBP3-206ENST00000420121 ZFR2Q9UPR6 939 aaKnown RBP11.27□□□□□ -0.61
SSBP3-206ENST00000420121 CA5BQ9Y2D0 317 aa11.27□□□□□ -0.61
SSBP3-206ENST00000420121 FCF1Q9Y324 198 aaKnown RBP11.27□□□□□ -0.61
SSBP3-206ENST00000420121 ZFYVE26Q68DK2 2539 aa11.26□□□□□ -0.61
SSBP3-206ENST00000420121 CXorf51AA0A1B0GTR3 108 aa11.26□□□□□ -0.61
SSBP3-206ENST00000420121 TLR4O00206 839 aa11.26□□□□□ -0.61
SSBP3-206ENST00000420121 KPNA3O00505 521 aaPredicted RBP11.26□□□□□ -0.61
SSBP3-206ENST00000420121 DFNA5O60443 496 aa11.26□□□□□ -0.61
SSBP3-206ENST00000420121 RNGTTO60942 597 aaKnown RBP11.26□□□□□ -0.61
SSBP3-206ENST00000420121 LEFTY1O75610 366 aa11.26□□□□□ -0.61
SSBP3-206ENST00000420121 PRNPP04156 253 aa11.26□□□□□ -0.61
SSBP3-206ENST00000420121 PLEKP08567 350 aaPredicted RBP11.26□□□□□ -0.61
SSBP3-206ENST00000420121 EPHA8P29322 1005 aaPredicted RBP11.26□□□□□ -0.61
SSBP3-206ENST00000420121 GRK6P43250 576 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms