RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 BTBD6Q96KE9 485 aa21.04■□□□□ 0.96
PKNOX1-202ENST00000418336 MRPL47Q9HD33 250 aaKnown RBP21.04■□□□□ 0.96
PKNOX1-202ENST00000418336 DNAAF2Q9NVR5 837 aaKnown RBP21.04■□□□□ 0.96
PKNOX1-202ENST00000418336 NCKAP1Q9Y2A7 1128 aa21.04■□□□□ 0.96
PKNOX1-202ENST00000418336 WNT9AO14904 365 aa21.03■□□□□ 0.96
PKNOX1-202ENST00000418336 BCAT2O15382 392 aaPredicted RBP21.03■□□□□ 0.96
PKNOX1-202ENST00000418336 SLC7A4O43246 635 aa21.03■□□□□ 0.96
PKNOX1-202ENST00000418336 LATO43561 262 aa21.03■□□□□ 0.96
PKNOX1-202ENST00000418336 RAMP2O60895 175 aa21.03■□□□□ 0.96
PKNOX1-202ENST00000418336 MFAP3LO75121 409 aa21.03■□□□□ 0.96
PKNOX1-202ENST00000418336 CD27P26842 260 aa21.03■□□□□ 0.96
PKNOX1-202ENST00000418336 HTR7P34969 479 aa21.03■□□□□ 0.96
PKNOX1-202ENST00000418336 CCR5P51681 352 aa21.03■□□□□ 0.96
PKNOX1-202ENST00000418336 PPP2CBP62714 309 aa21.03■□□□□ 0.96
PKNOX1-202ENST00000418336 PPP2CAP67775 309 aa21.03■□□□□ 0.96
PKNOX1-202ENST00000418336 GFPT1Q06210 699 aaPredicted RBP21.03■□□□□ 0.96
PKNOX1-202ENST00000418336 CNTN1Q12860 1018 aa21.03■□□□□ 0.96
PKNOX1-202ENST00000418336 GRIK2Q13002 908 aa21.03■□□□□ 0.96
PKNOX1-202ENST00000418336 TRIM14Q14142 442 aa21.03■□□□□ 0.96
PKNOX1-202ENST00000418336 IL31Q6EBC2 164 aa21.03■□□□□ 0.96
PKNOX1-202ENST00000418336 TXNRD3NBQ6F5E7 133 aa21.03■□□□□ 0.96
PKNOX1-202ENST00000418336 RETSATQ6NUM9 610 aa21.03■□□□□ 0.96
PKNOX1-202ENST00000418336 CPNE8Q86YQ8 564 aa21.03■□□□□ 0.96
PKNOX1-202ENST00000418336 PSTKQ8IV42 348 aaKnown RBP21.03■□□□□ 0.96
PKNOX1-202ENST00000418336 PLPP6Q8IY26 295 aa21.03■□□□□ 0.96
PKNOX1-202ENST00000418336 ISG20Q96AZ6 181 aaKnown RBP21.03■□□□□ 0.96
PKNOX1-202ENST00000418336 HMCESQ96FZ2 354 aa21.03■□□□□ 0.96
PKNOX1-202ENST00000418336 EPAS1Q99814 870 aa21.03■□□□□ 0.96
PKNOX1-202ENST00000418336 OMDQ99983 421 aa21.03■□□□□ 0.96
PKNOX1-202ENST00000418336 PACSIN1Q9BY11 444 aa21.03■□□□□ 0.96
PKNOX1-202ENST00000418336 PDFQ9HBH1 243 aa21.03■□□□□ 0.96
PKNOX1-202ENST00000418336 TM9SF3Q9HD45 589 aa21.03■□□□□ 0.96
PKNOX1-202ENST00000418336 ABHD10Q9NUJ1 306 aa21.03■□□□□ 0.96
PKNOX1-202ENST00000418336 DOCK9Q9BZ29 2069 aa21.02■□□□□ 0.96
PKNOX1-202ENST00000418336 A0A1W2PPC4 97 aa21.02■□□□□ 0.96
PKNOX1-202ENST00000418336 EIF3CLB5ME19 914 aaKnown RBP21.02■□□□□ 0.96
PKNOX1-202ENST00000418336 FGF10O15520 208 aaPredicted RBP21.02■□□□□ 0.96
PKNOX1-202ENST00000418336 FSBPO95073 299 aa21.02■□□□□ 0.96
PKNOX1-202ENST00000418336 TPM3P06753 285 aa21.02■□□□□ 0.96
PKNOX1-202ENST00000418336 ETFBP38117 255 aa21.02■□□□□ 0.96
PKNOX1-202ENST00000418336 MAPK8P45983 427 aa21.02■□□□□ 0.96
PKNOX1-202ENST00000418336 SLC25A11Q02978 314 aaKnown RBP21.02■□□□□ 0.96
PKNOX1-202ENST00000418336 SERINC3Q13530 473 aa21.02■□□□□ 0.96
PKNOX1-202ENST00000418336 ACAP1Q15027 740 aa21.02■□□□□ 0.96
PKNOX1-202ENST00000418336 POLD3Q15054 466 aaPredicted RBP21.02■□□□□ 0.96
PKNOX1-202ENST00000418336 SLC18A3Q16572 532 aa21.02■□□□□ 0.96
PKNOX1-202ENST00000418336 POM121L1PQ3SYA9 428 aa21.02■□□□□ 0.96
PKNOX1-202ENST00000418336 KCNT1Q5JUK3 1230 aa21.02■□□□□ 0.96
PKNOX1-202ENST00000418336 CCDC122Q5T0U0 273 aa21.02■□□□□ 0.96
PKNOX1-202ENST00000418336 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP21.02■□□□□ 0.96
PKNOX1-202ENST00000418336 LEKR1Q6ZMV7 388 aa21.02■□□□□ 0.96
PKNOX1-202ENST00000418336 PIP4P1Q86T03 277 aa21.02■□□□□ 0.96
PKNOX1-202ENST00000418336 ARHGAP12Q8IWW6 846 aa21.02■□□□□ 0.96
PKNOX1-202ENST00000418336 PCDH20Q8N6Y1 951 aaKnown RBP21.02■□□□□ 0.96
PKNOX1-202ENST00000418336 OR8K1Q8NGG5 319 aa21.02■□□□□ 0.96
PKNOX1-202ENST00000418336 EIF3CQ99613 913 aaKnown RBP21.02■□□□□ 0.96
PKNOX1-202ENST00000418336 CHP1Q99653 195 aa21.02■□□□□ 0.96
PKNOX1-202ENST00000418336 MIR1-1HGQ9H1L0 117 aa21.02■□□□□ 0.96
PKNOX1-202ENST00000418336 DHX35Q9H5Z1 703 aaKnown RBP21.02■□□□□ 0.96
PKNOX1-202ENST00000418336 SSU72P8A0A1W2PR75 194 aa21.01■□□□□ 0.95
PKNOX1-202ENST00000418336 RASA4BC9J798 803 aa21.01■□□□□ 0.95
PKNOX1-202ENST00000418336 RASA4O43374 803 aa21.01■□□□□ 0.95
PKNOX1-202ENST00000418336 WNT1P04628 370 aa21.01■□□□□ 0.95
PKNOX1-202ENST00000418336 DPYSQ14117 519 aa21.01■□□□□ 0.95
PKNOX1-202ENST00000418336 PPM1JQ5JR12 505 aa21.01■□□□□ 0.95
PKNOX1-202ENST00000418336 FAM46CQ5VWP2 391 aa21.01■□□□□ 0.95
PKNOX1-202ENST00000418336 RFX8Q6ZV50 586 aa21.01■□□□□ 0.95
PKNOX1-202ENST00000418336 DSG4Q86SJ6 1040 aa21.01■□□□□ 0.95
PKNOX1-202ENST00000418336 MINDY1Q8N5J2 469 aa21.01■□□□□ 0.95
PKNOX1-202ENST00000418336 NPWQ8N729 165 aa21.01■□□□□ 0.95
PKNOX1-202ENST00000418336 NUP85Q9BW27 656 aa21.01■□□□□ 0.95
PKNOX1-202ENST00000418336 CWC15Q9P013 229 aaKnown RBP21.01■□□□□ 0.95
PKNOX1-202ENST00000418336 KNL1Q8NG31 2342 aa21.01■□□□□ 0.95
PKNOX1-202ENST00000418336 UPK3BL1B0FP48 263 aa21■□□□□ 0.95
PKNOX1-202ENST00000418336 UPK3BL2E5RIL1 263 aa21■□□□□ 0.95
PKNOX1-202ENST00000418336 BNIP3LO60238 219 aa21■□□□□ 0.95
PKNOX1-202ENST00000418336 LEFTY1O75610 366 aa21■□□□□ 0.95
PKNOX1-202ENST00000418336 RNF8O76064 485 aa21■□□□□ 0.95
PKNOX1-202ENST00000418336 CD59P13987 128 aa21■□□□□ 0.95
PKNOX1-202ENST00000418336 GNSP15586 552 aa21■□□□□ 0.95
PKNOX1-202ENST00000418336 HCAR3P49019 387 aa21■□□□□ 0.95
PKNOX1-202ENST00000418336 CSNK1EP49674 416 aaKnown RBP21■□□□□ 0.95
PKNOX1-202ENST00000418336 CCNHP51946 323 aaPredicted RBP21■□□□□ 0.95
PKNOX1-202ENST00000418336 ADKP55263 362 aaKnown RBP21■□□□□ 0.95
PKNOX1-202ENST00000418336 YBEYP58557 167 aaPredicted RBP21■□□□□ 0.95
PKNOX1-202ENST00000418336 TPI1P60174 286 aa21■□□□□ 0.95
PKNOX1-202ENST00000418336 FOXK2Q01167 660 aa21■□□□□ 0.95
PKNOX1-202ENST00000418336 SFSWAPQ12872 951 aaKnown RBP21■□□□□ 0.95
PKNOX1-202ENST00000418336 DPYSL2Q16555 572 aa21■□□□□ 0.95
PKNOX1-202ENST00000418336 PARP15Q460N3 678 aa21■□□□□ 0.95
PKNOX1-202ENST00000418336 CARD16Q5EG05 197 aa21■□□□□ 0.95
PKNOX1-202ENST00000418336 ARSIQ5FYB1 569 aa21■□□□□ 0.95
PKNOX1-202ENST00000418336 LAYNQ6UX15 382 aa21■□□□□ 0.95
PKNOX1-202ENST00000418336 VPS36Q86VN1 386 aa21■□□□□ 0.95
PKNOX1-202ENST00000418336 OR14C36Q8NHC7 312 aa21■□□□□ 0.95
PKNOX1-202ENST00000418336 GANCQ8TET4 914 aa21■□□□□ 0.95
PKNOX1-202ENST00000418336 KDM4CQ9H3R0 1056 aa21■□□□□ 0.95
PKNOX1-202ENST00000418336 CATSPERBQ9H7T0 1116 aa21■□□□□ 0.95
PKNOX1-202ENST00000418336 IL21RQ9HBE5 538 aa21■□□□□ 0.95
PKNOX1-202ENST00000418336 IL36AQ9UHA7 158 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms