RNA–Protein interactions for RNA: ENST00000418212.5

BDNF-208, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-208ENST00000418212 CLEC4CQ8WTT0 213 aa13.41□□□□□ -0.26
BDNF-208ENST00000418212 PCED1BQ96HM7 432 aa13.41□□□□□ -0.26
BDNF-208ENST00000418212 CDK5RAP1Q96SZ6 601 aaKnown RBP13.41□□□□□ -0.26
BDNF-208ENST00000418212 CDRT15Q96T59 188 aa13.41□□□□□ -0.26
BDNF-208ENST00000418212 ZDHHC6Q9H6R6 413 aa13.41□□□□□ -0.26
BDNF-208ENST00000418212 SLC17A7Q9P2U7 560 aa13.41□□□□□ -0.26
BDNF-208ENST00000418212 MYH10P35580 1976 aa13.41□□□□□ -0.26
BDNF-208ENST00000418212 FGF10O15520 208 aaPredicted RBP13.41□□□□□ -0.26
BDNF-208ENST00000418212 MFSD11O43934 449 aa13.41□□□□□ -0.26
BDNF-208ENST00000418212 CRABP2P29373 138 aa13.41□□□□□ -0.26
BDNF-208ENST00000418212 GALNT3Q14435 633 aa13.41□□□□□ -0.26
BDNF-208ENST00000418212 PABPC1LQ4VXU2 614 aaKnown RBP13.41□□□□□ -0.26
BDNF-208ENST00000418212 SLC24A5Q71RS6 500 aa13.41□□□□□ -0.26
BDNF-208ENST00000418212 OTOP2Q7RTS6 562 aa13.41□□□□□ -0.26
BDNF-208ENST00000418212 TMPRSS6Q8IU80 811 aa13.41□□□□□ -0.26
BDNF-208ENST00000418212 PCDH20Q8N6Y1 951 aaKnown RBP13.41□□□□□ -0.26
BDNF-208ENST00000418212 EFCAB3Q8N7B9 438 aa13.41□□□□□ -0.26
BDNF-208ENST00000418212 CCT7Q99832 543 aa13.41□□□□□ -0.26
BDNF-208ENST00000418212 ACE2Q9BYF1 805 aaPredicted RBP13.41□□□□□ -0.26
BDNF-208ENST00000418212 FZD8Q9H461 694 aa13.41□□□□□ -0.26
BDNF-208ENST00000418212 ZNF711Q9Y462 761 aa13.41□□□□□ -0.26
BDNF-208ENST00000418212 CCL22O00626 93 aa13.4□□□□□ -0.26
BDNF-208ENST00000418212 RNASEH1O60930 286 aaKnown RBP13.4□□□□□ -0.26
BDNF-208ENST00000418212 VNN1O95497 513 aa13.4□□□□□ -0.26
BDNF-208ENST00000418212 IGSF6O95976 241 aa13.4□□□□□ -0.26
BDNF-208ENST00000418212 RPL17P18621 184 aaKnown RBP13.4□□□□□ -0.26
BDNF-208ENST00000418212 PSMA4P25789 261 aaKnown RBP13.4□□□□□ -0.26
BDNF-208ENST00000418212 USP4Q13107 963 aa13.4□□□□□ -0.26
BDNF-208ENST00000418212 XRCC4Q13426 336 aa13.4□□□□□ -0.26
BDNF-208ENST00000418212 USP41Q3LFD5 358 aa13.4□□□□□ -0.26
BDNF-208ENST00000418212 ZC3H12BQ5HYM0 836 aaKnown RBP13.4□□□□□ -0.26
BDNF-208ENST00000418212 OTUD3Q5T2D3 398 aaPredicted RBP13.4□□□□□ -0.26
BDNF-208ENST00000418212 ANKRD22Q5VYY1 191 aa13.4□□□□□ -0.26
BDNF-208ENST00000418212 OTOP3Q7RTS5 596 aa13.4□□□□□ -0.26
BDNF-208ENST00000418212 ZNF614Q8N883 585 aa13.4□□□□□ -0.26
BDNF-208ENST00000418212 SNRNP27Q8WVK2 155 aaKnown RBP13.4□□□□□ -0.26
BDNF-208ENST00000418212 EZH1Q92800 747 aaPredicted RBP13.4□□□□□ -0.26
BDNF-208ENST00000418212 TWNKQ96RR1 684 aa13.4□□□□□ -0.26
BDNF-208ENST00000418212 EXOSC4Q9NPD3 245 aaKnown RBP13.4□□□□□ -0.26
BDNF-208ENST00000418212 STXBP5LQ9Y2K9 1186 aa13.4□□□□□ -0.26
BDNF-208ENST00000418212 COQ4Q9Y3A0 265 aa13.4□□□□□ -0.26
BDNF-208ENST00000418212 A0A1W2PQH9 124 aa13.4□□□□□ -0.26
BDNF-208ENST00000418212 INPP4BO15327 924 aa13.4□□□□□ -0.26
BDNF-208ENST00000418212 ONECUT3O60422 494 aaPredicted RBP13.4□□□□□ -0.26
BDNF-208ENST00000418212 TOMM70O94826 608 aa13.4□□□□□ -0.26
BDNF-208ENST00000418212 ZNF682O95780 498 aa13.4□□□□□ -0.26
BDNF-208ENST00000418212 ALBP02768 609 aa13.4□□□□□ -0.26
BDNF-208ENST00000418212 HSPA1AP0DMV8 641 aaKnown RBP13.4□□□□□ -0.26
BDNF-208ENST00000418212 HSPA1BP0DMV9 641 aaKnown RBP13.4□□□□□ -0.26
BDNF-208ENST00000418212 KYAT3Q6YP21 454 aaKnown RBP13.4□□□□□ -0.26
BDNF-208ENST00000418212 TRABD2AQ86V40 505 aa13.4□□□□□ -0.26
BDNF-208ENST00000418212 ZNF786Q8N393 782 aa13.4□□□□□ -0.26
BDNF-208ENST00000418212 SPOCK2Q92563 424 aa13.4□□□□□ -0.26
BDNF-208ENST00000418212 PPP1R10Q96QC0 940 aaKnown RBP13.4□□□□□ -0.26
BDNF-208ENST00000418212 MLPHQ9BV36 600 aaPredicted RBP13.4□□□□□ -0.26
BDNF-208ENST00000418212 SPATA16Q9BXB7 569 aa13.4□□□□□ -0.26
BDNF-208ENST00000418212 CHKBQ9Y259 395 aa13.4□□□□□ -0.26
BDNF-208ENST00000418212 ATXN2Q99700 1313 aaKnown RBP13.4□□□□□ -0.26
BDNF-208ENST00000418212 CSH1P0DML2 217 aa13.4□□□□□ -0.26
BDNF-208ENST00000418212 CSH2P0DML3 217 aa13.4□□□□□ -0.26
BDNF-208ENST00000418212 HNRNPLP14866 589 aaKnown RBP eCLIP13.4□□□□□ -0.26
BDNF-208ENST00000418212 CREB1P16220 341 aa13.4□□□□□ -0.26
BDNF-208ENST00000418212 MSH3P20585 1137 aa13.4□□□□□ -0.26
BDNF-208ENST00000418212 CYP2C18P33260 490 aa13.4□□□□□ -0.26
BDNF-208ENST00000418212 PRKCZQ05513 592 aa13.4□□□□□ -0.26
BDNF-208ENST00000418212 CHRNB3Q05901 458 aa13.4□□□□□ -0.26
BDNF-208ENST00000418212 FASTKQ14296 549 aaKnown RBP13.4□□□□□ -0.26
BDNF-208ENST00000418212 RFWD3Q6PCD5 774 aa13.4□□□□□ -0.26
BDNF-208ENST00000418212 C16orf87Q6PH81 154 aa13.4□□□□□ -0.26
BDNF-208ENST00000418212 STRADAQ7RTN6 431 aa13.4□□□□□ -0.26
BDNF-208ENST00000418212 SLC22A9Q8IVM8 553 aa13.4□□□□□ -0.26
BDNF-208ENST00000418212 FAM126BQ8IXS8 530 aa13.4□□□□□ -0.26
BDNF-208ENST00000418212 ZNF555Q8NEP9 628 aa13.4□□□□□ -0.26
BDNF-208ENST00000418212 ZSCAN18Q8TBC5 510 aaPredicted RBP13.4□□□□□ -0.26
BDNF-208ENST00000418212 PLEKHO2Q8TD55 490 aa13.4□□□□□ -0.26
BDNF-208ENST00000418212 DQX1Q8TE96 717 aaKnown RBP13.4□□□□□ -0.26
BDNF-208ENST00000418212 DTNBP1Q96EV8 351 aa13.4□□□□□ -0.26
BDNF-208ENST00000418212 B3GALT6Q96L58 329 aa13.4□□□□□ -0.26
BDNF-208ENST00000418212 LNPEPQ9UIQ6 1025 aa13.4□□□□□ -0.26
BDNF-208ENST00000418212 GGA2Q9UJY4 613 aa13.4□□□□□ -0.26
BDNF-208ENST00000418212 TBL1XO60907 577 aa13.39□□□□□ -0.27
BDNF-208ENST00000418212 ABCB1P08183 1280 aaPredicted RBP13.39□□□□□ -0.27
BDNF-208ENST00000418212 HOXD13P35453 343 aa13.39□□□□□ -0.27
BDNF-208ENST00000418212 CCDC15Q0P6D6 951 aa13.39□□□□□ -0.27
BDNF-208ENST00000418212 ACOX1Q15067 660 aa13.39□□□□□ -0.27
BDNF-208ENST00000418212 CCDC157Q569K6 752 aa13.39□□□□□ -0.27
BDNF-208ENST00000418212 TXNRD3NBQ6F5E7 133 aa13.39□□□□□ -0.27
BDNF-208ENST00000418212 DET1Q7L5Y6 550 aa13.39□□□□□ -0.27
BDNF-208ENST00000418212 TRIM74Q86UV6 250 aa13.39□□□□□ -0.27
BDNF-208ENST00000418212 TRIM73Q86UV7 250 aa13.39□□□□□ -0.27
BDNF-208ENST00000418212 HORMAD1Q86X24 394 aa13.39□□□□□ -0.27
BDNF-208ENST00000418212 TRAPPC5Q8IUR0 188 aa13.39□□□□□ -0.27
BDNF-208ENST00000418212 P3H2Q8IVL5 708 aa13.39□□□□□ -0.27
BDNF-208ENST00000418212 CCDC185Q8N715 623 aa13.39□□□□□ -0.27
BDNF-208ENST00000418212 SPATA22Q8NHS9 363 aa13.39□□□□□ -0.27
BDNF-208ENST00000418212 CPT1BQ92523 772 aa13.39□□□□□ -0.27
BDNF-208ENST00000418212 FTHL17Q9BXU8 183 aa13.39□□□□□ -0.27
BDNF-208ENST00000418212 ABCG8Q9H221 673 aa13.39□□□□□ -0.27
BDNF-208ENST00000418212 SCHIP1Q9P0W5 487 aaPredicted RBP13.39□□□□□ -0.27
BDNF-208ENST00000418212 XPR1Q9UBH6 696 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms