RNA–Protein interactions for RNA: ENST00000418107.2

HLA-DMB-258, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DMB, Length 1,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-258ENST00000418107 ECHS1P30084 290 aa13.47□□□□□ -0.25
HLA-DMB-258ENST00000418107 RPL22P35268 128 aaKnown RBP13.47□□□□□ -0.25
HLA-DMB-258ENST00000418107 SLC11A2P49281 568 aa13.47□□□□□ -0.25
HLA-DMB-258ENST00000418107 GDF10P55107 478 aa13.47□□□□□ -0.25
HLA-DMB-258ENST00000418107 FAM193AP78312 1265 aa13.47□□□□□ -0.25
HLA-DMB-258ENST00000418107 GRSF1Q12849 480 aaKnown RBP eCLIP13.47□□□□□ -0.25
HLA-DMB-258ENST00000418107 TMEM196Q5HYL7 178 aa13.47□□□□□ -0.25
HLA-DMB-258ENST00000418107 CFAP58Q5T655 872 aa13.47□□□□□ -0.25
HLA-DMB-258ENST00000418107 ACBD5Q5T8D3 534 aaPredicted RBP13.47□□□□□ -0.25
HLA-DMB-258ENST00000418107 PIK3R6Q5UE93 754 aa13.47□□□□□ -0.25
HLA-DMB-258ENST00000418107 RAP1GAP2Q684P5 730 aa13.47□□□□□ -0.25
HLA-DMB-258ENST00000418107 TRIM68Q6AZZ1 485 aa13.47□□□□□ -0.25
HLA-DMB-258ENST00000418107 ZDHHC24Q6UX98 284 aa13.47□□□□□ -0.25
HLA-DMB-258ENST00000418107 CEP128Q6ZU80 1094 aa13.47□□□□□ -0.25
HLA-DMB-258ENST00000418107 C14orf80Q86SX3 495 aa13.47□□□□□ -0.25
HLA-DMB-258ENST00000418107 GLIS1Q8NBF1 620 aa13.47□□□□□ -0.25
HLA-DMB-258ENST00000418107 NETO2Q8NC67 525 aa13.47□□□□□ -0.25
HLA-DMB-258ENST00000418107 LRRN4Q8WUT4 740 aa13.47□□□□□ -0.25
HLA-DMB-258ENST00000418107 UBLCP1Q8WVY7 318 aaPredicted RBP13.47□□□□□ -0.25
HLA-DMB-258ENST00000418107 CHFRQ96EP1 664 aa13.47□□□□□ -0.25
HLA-DMB-258ENST00000418107 FAM83CQ9BQN1 747 aa13.47□□□□□ -0.25
HLA-DMB-258ENST00000418107 TSPYL1Q9H0U9 437 aa13.47□□□□□ -0.25
HLA-DMB-258ENST00000418107 EBF3Q9H4W6 596 aa13.47□□□□□ -0.25
HLA-DMB-258ENST00000418107 HPS4Q9NQG7 708 aa13.47□□□□□ -0.25
HLA-DMB-258ENST00000418107 ZDHHC18Q9NUE0 388 aa13.47□□□□□ -0.25
HLA-DMB-258ENST00000418107 DONSONQ9NYP3 566 aa13.47□□□□□ -0.25
HLA-DMB-258ENST00000418107 PAK5Q9P286 719 aa13.47□□□□□ -0.25
HLA-DMB-258ENST00000418107 XPO7Q9UIA9 1087 aaKnown RBP13.47□□□□□ -0.25
HLA-DMB-258ENST00000418107 RALYQ9UKM9 306 aaKnown RBP13.47□□□□□ -0.25
HLA-DMB-258ENST00000418107 VANGL2Q9ULK5 521 aa13.47□□□□□ -0.25
HLA-DMB-258ENST00000418107 SLC8A2Q9UPR5 921 aa13.47□□□□□ -0.25
HLA-DMB-258ENST00000418107 CCL26Q9Y258 94 aa13.47□□□□□ -0.25
HLA-DMB-258ENST00000418107 SPAG17Q6Q759 2223 aa13.47□□□□□ -0.25
HLA-DMB-258ENST00000418107 CCDC163A0A0D9SF12 145 aa13.46□□□□□ -0.25
HLA-DMB-258ENST00000418107 DFFAO00273 331 aa13.46□□□□□ -0.25
HLA-DMB-258ENST00000418107 RNF40O75150 1001 aa13.46□□□□□ -0.25
HLA-DMB-258ENST00000418107 EGFP01133 1207 aa13.46□□□□□ -0.25
HLA-DMB-258ENST00000418107 MPLP40238 635 aa13.46□□□□□ -0.25
HLA-DMB-258ENST00000418107 BASP1P80723 227 aaKnown RBP13.46□□□□□ -0.25
HLA-DMB-258ENST00000418107 SHC2P98077 582 aa13.46□□□□□ -0.25
HLA-DMB-258ENST00000418107 NRG1Q02297 640 aaPredicted RBP13.46□□□□□ -0.25
HLA-DMB-258ENST00000418107 RUNX3Q13761 415 aa13.46□□□□□ -0.25
HLA-DMB-258ENST00000418107 AUHQ13825 339 aaKnown RBP13.46□□□□□ -0.25
HLA-DMB-258ENST00000418107 SLMAPQ14BN4 828 aa13.46□□□□□ -0.25
HLA-DMB-258ENST00000418107 MS4A13Q5J8X5 152 aa13.46□□□□□ -0.25
HLA-DMB-258ENST00000418107 PLA2G2CQ5R387 149 aa13.46□□□□□ -0.25
HLA-DMB-258ENST00000418107 TCEAL6Q6IPX3 200 aa13.46□□□□□ -0.25
HLA-DMB-258ENST00000418107 KLHDC10Q6PID8 442 aa13.46□□□□□ -0.25
HLA-DMB-258ENST00000418107 C4orf22Q6V702 233 aa13.46□□□□□ -0.25
HLA-DMB-258ENST00000418107 ARHGEF18Q6ZSZ5 1173 aa13.46□□□□□ -0.25
HLA-DMB-258ENST00000418107 CMTM8Q8IZV2 173 aa13.46□□□□□ -0.25
HLA-DMB-258ENST00000418107 LZTR1Q8N653 840 aa13.46□□□□□ -0.25
HLA-DMB-258ENST00000418107 HTR3CQ8WXA8 447 aa13.46□□□□□ -0.25
HLA-DMB-258ENST00000418107 TCEAL3Q969E4 200 aa13.46□□□□□ -0.25
HLA-DMB-258ENST00000418107 PLD4Q96BZ4 506 aa13.46□□□□□ -0.25
HLA-DMB-258ENST00000418107 HHIPQ96QV1 700 aa13.46□□□□□ -0.25
HLA-DMB-258ENST00000418107 LGMNQ99538 433 aa13.46□□□□□ -0.25
HLA-DMB-258ENST00000418107 BRD8Q9H0E9 1235 aa13.46□□□□□ -0.25
HLA-DMB-258ENST00000418107 USP29Q9HBJ7 922 aa13.46□□□□□ -0.25
HLA-DMB-258ENST00000418107 MPP6Q9NZW5 540 aa13.46□□□□□ -0.25
HLA-DMB-258ENST00000418107 ATP8A1Q9Y2Q0 1164 aa13.46□□□□□ -0.25
HLA-DMB-258ENST00000418107 C2orf78A6NCI8 922 aa13.45□□□□□ -0.26
HLA-DMB-258ENST00000418107 F5H5T6 163 aa13.45□□□□□ -0.26
HLA-DMB-258ENST00000418107 TRDMT1O14717 391 aaKnown RBP13.45□□□□□ -0.26
HLA-DMB-258ENST00000418107 ATG13O75143 517 aa13.45□□□□□ -0.26
HLA-DMB-258ENST00000418107 IGLV3-27P01718 113 aa13.45□□□□□ -0.26
HLA-DMB-258ENST00000418107 F11P03951 625 aa13.45□□□□□ -0.26
HLA-DMB-258ENST00000418107 ARSAP15289 507 aa13.45□□□□□ -0.26
HLA-DMB-258ENST00000418107 HDCP19113 662 aa13.45□□□□□ -0.26
HLA-DMB-258ENST00000418107 HSPA9P38646 679 aaKnown RBP13.45□□□□□ -0.26
HLA-DMB-258ENST00000418107 LMAN1P49257 510 aa13.45□□□□□ -0.26
HLA-DMB-258ENST00000418107 MORF4L2Q15014 288 aa13.45□□□□□ -0.26
HLA-DMB-258ENST00000418107 NAIF1Q69YI7 327 aaPredicted RBP13.45□□□□□ -0.26
HLA-DMB-258ENST00000418107 TMEM150AQ86TG1 271 aa13.45□□□□□ -0.26
HLA-DMB-258ENST00000418107 PPIL6Q8IXY8 311 aa13.45□□□□□ -0.26
HLA-DMB-258ENST00000418107 LGI2Q8N0V4 545 aa13.45□□□□□ -0.26
HLA-DMB-258ENST00000418107 MAB21L3Q8N8X9 362 aa13.45□□□□□ -0.26
HLA-DMB-258ENST00000418107 TTC16Q8NEE8 873 aa13.45□□□□□ -0.26
HLA-DMB-258ENST00000418107 RIN3Q8TB24 985 aa13.45□□□□□ -0.26
HLA-DMB-258ENST00000418107 CCDC110Q8TBZ0 833 aa13.45□□□□□ -0.26
HLA-DMB-258ENST00000418107 USP13Q92995 863 aaPredicted RBP13.45□□□□□ -0.26
HLA-DMB-258ENST00000418107 CELF6Q96J87 481 aaKnown RBP13.45□□□□□ -0.26
HLA-DMB-258ENST00000418107 RPRD1AQ96P16 312 aaPredicted RBP13.45□□□□□ -0.26
HLA-DMB-258ENST00000418107 OLFM3Q96PB7 478 aa13.45□□□□□ -0.26
HLA-DMB-258ENST00000418107 DDX50Q9BQ39 737 aaKnown RBP13.45□□□□□ -0.26
HLA-DMB-258ENST00000418107 FOXP3Q9BZS1 431 aa13.45□□□□□ -0.26
HLA-DMB-258ENST00000418107 ZYG11BQ9C0D3 744 aa13.45□□□□□ -0.26
HLA-DMB-258ENST00000418107 KLC2Q9H0B6 622 aa13.45□□□□□ -0.26
HLA-DMB-258ENST00000418107 VIPAS39Q9H9C1 493 aa13.45□□□□□ -0.26
HLA-DMB-258ENST00000418107 FBRSL1Q9HCM7 1045 aaKnown RBP13.45□□□□□ -0.26
HLA-DMB-258ENST00000418107 HPCAL4Q9UM19 191 aa13.45□□□□□ -0.26
HLA-DMB-258ENST00000418107 PCDHGA5Q9Y5G8 931 aa13.45□□□□□ -0.26
HLA-DMB-258ENST00000418107 LAMA1P25391 3075 aa13.45□□□□□ -0.26
HLA-DMB-258ENST00000418107 ATG2BQ96BY7 2078 aa13.45□□□□□ -0.26
HLA-DMB-258ENST00000418107 GOLGA6BA6NDN3 693 aa13.45□□□□□ -0.26
HLA-DMB-258ENST00000418107 MAP2K7O14733 419 aa13.45□□□□□ -0.26
HLA-DMB-258ENST00000418107 ACSL4O60488 711 aa13.45□□□□□ -0.26
HLA-DMB-258ENST00000418107 SASH3O75995 380 aa13.45□□□□□ -0.26
HLA-DMB-258ENST00000418107 KCNK5O95279 499 aa13.45□□□□□ -0.26
HLA-DMB-258ENST00000418107 OAS1P00973 400 aaKnown RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms