RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 CHD5Q8TDI0 1954 aa8.62□□□□□ -1.03
TRIM48-201ENST00000417545 EDDM13A0A1B0GTR0 161 aa8.62□□□□□ -1.03
TRIM48-201ENST00000417545 GOLGA6CA6NDK9 693 aa8.62□□□□□ -1.03
TRIM48-201ENST00000417545 GOLGA6BA6NDN3 693 aa8.62□□□□□ -1.03
TRIM48-201ENST00000417545 TMEM221A6NGB7 291 aa8.62□□□□□ -1.03
TRIM48-201ENST00000417545 CCDC188H7C350 402 aa8.62□□□□□ -1.03
TRIM48-201ENST00000417545 K7EQS6 105 aa8.62□□□□□ -1.03
TRIM48-201ENST00000417545 M0R296 226 aa8.62□□□□□ -1.03
TRIM48-201ENST00000417545 KCNK1O00180 336 aa8.62□□□□□ -1.03
TRIM48-201ENST00000417545 RNF103O00237 685 aa8.62□□□□□ -1.03
TRIM48-201ENST00000417545 MATN3O15232 486 aa8.62□□□□□ -1.03
TRIM48-201ENST00000417545 LIASO43766 372 aa8.62□□□□□ -1.03
TRIM48-201ENST00000417545 MAFKO60675 156 aa8.62□□□□□ -1.03
TRIM48-201ENST00000417545 RNASEH1O60930 286 aaKnown RBP8.62□□□□□ -1.03
TRIM48-201ENST00000417545 PHF2O75151 1096 aa8.62□□□□□ -1.03
TRIM48-201ENST00000417545 TMCC1O94876 653 aa8.62□□□□□ -1.03
TRIM48-201ENST00000417545 GAS8O95995 478 aa8.62□□□□□ -1.03
TRIM48-201ENST00000417545 GOLGA6DP0CG33 693 aa8.62□□□□□ -1.03
TRIM48-201ENST00000417545 SRCP12931 536 aa8.62□□□□□ -1.03
TRIM48-201ENST00000417545 CCNB1P14635 433 aa8.62□□□□□ -1.03
TRIM48-201ENST00000417545 TARSP26639 723 aaKnown RBP8.62□□□□□ -1.03
TRIM48-201ENST00000417545 RBL1P28749 1068 aa8.62□□□□□ -1.03
TRIM48-201ENST00000417545 NTSR1P30989 418 aa8.62□□□□□ -1.03
TRIM48-201ENST00000417545 HSPA9P38646 679 aaKnown RBP8.62□□□□□ -1.03
TRIM48-201ENST00000417545 LMAN1P49257 510 aa8.62□□□□□ -1.03
TRIM48-201ENST00000417545 ARF5P84085 180 aa8.62□□□□□ -1.03
TRIM48-201ENST00000417545 ZNF33AQ06730 810 aa8.62□□□□□ -1.03
TRIM48-201ENST00000417545 SLC10A2Q12908 348 aaPredicted RBP8.62□□□□□ -1.03
TRIM48-201ENST00000417545 KLF1Q13351 362 aaPredicted RBP8.62□□□□□ -1.03
TRIM48-201ENST00000417545 PPP1R7Q15435 360 aa8.62□□□□□ -1.03
TRIM48-201ENST00000417545 DLG2Q15700 870 aa8.62□□□□□ -1.03
TRIM48-201ENST00000417545 CCNG2Q16589 344 aa8.62□□□□□ -1.03
TRIM48-201ENST00000417545 HSF5Q4G112 596 aaPredicted RBP8.62□□□□□ -1.03
TRIM48-201ENST00000417545 ITPRIPL1Q6GPH6 555 aa8.62□□□□□ -1.03
TRIM48-201ENST00000417545 CCDC70Q6NSX1 233 aa8.62□□□□□ -1.03
TRIM48-201ENST00000417545 C22orf39Q6P5X5 142 aa8.62□□□□□ -1.03
TRIM48-201ENST00000417545 CCDC137Q6PK04 289 aaKnown RBP8.62□□□□□ -1.03
TRIM48-201ENST00000417545 ARHGEF18Q6ZSZ5 1173 aa8.62□□□□□ -1.03
TRIM48-201ENST00000417545 TRIM67Q6ZTA4 783 aa8.62□□□□□ -1.03
TRIM48-201ENST00000417545 KIAA0907Q7Z7F0 614 aaPredicted RBP8.62□□□□□ -1.03
TRIM48-201ENST00000417545 DSG4Q86SJ6 1040 aa8.62□□□□□ -1.03
TRIM48-201ENST00000417545 TP53INP2Q8IXH6 220 aa8.62□□□□□ -1.03
TRIM48-201ENST00000417545 KLHL7Q8IXQ5 586 aa8.62□□□□□ -1.03
TRIM48-201ENST00000417545 PGBD3Q8N328 593 aa8.62□□□□□ -1.03
TRIM48-201ENST00000417545 PHTF2Q8N3S3 785 aa8.62□□□□□ -1.03
TRIM48-201ENST00000417545 SYNPOQ8N3V7 929 aa8.62□□□□□ -1.03
TRIM48-201ENST00000417545 SH2D3CQ8N5H7 860 aa8.62□□□□□ -1.03
TRIM48-201ENST00000417545 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.62□□□□□ -1.03
TRIM48-201ENST00000417545 ALLCQ8N6M5 410 aa8.62□□□□□ -1.03
TRIM48-201ENST00000417545 PCDH20Q8N6Y1 951 aaKnown RBP8.62□□□□□ -1.03
TRIM48-201ENST00000417545 ZNF366Q8N895 744 aa8.62□□□□□ -1.03
TRIM48-201ENST00000417545 CEP112Q8N8E3 955 aa8.62□□□□□ -1.03
TRIM48-201ENST00000417545 TXNDC5Q8NBS9 432 aaKnown RBP8.62□□□□□ -1.03
TRIM48-201ENST00000417545 PJA1Q8NG27 643 aa8.62□□□□□ -1.03
TRIM48-201ENST00000417545 KCNV2Q8TDN2 545 aa8.62□□□□□ -1.03
TRIM48-201ENST00000417545 LRRN4Q8WUT4 740 aa8.62□□□□□ -1.03
TRIM48-201ENST00000417545 GDAP1L1Q96MZ0 367 aa8.62□□□□□ -1.03
TRIM48-201ENST00000417545 HERPUD2Q9BSE4 406 aa8.62□□□□□ -1.03
TRIM48-201ENST00000417545 TM6SF2Q9BZW4 377 aa8.62□□□□□ -1.03
TRIM48-201ENST00000417545 CEP44Q9C0F1 390 aa8.62□□□□□ -1.03
TRIM48-201ENST00000417545 POLR1EQ9GZS1 481 aaKnown RBP8.62□□□□□ -1.03
TRIM48-201ENST00000417545 KLC2Q9H0B6 622 aa8.62□□□□□ -1.03
TRIM48-201ENST00000417545 TNKS2Q9H2K2 1166 aa8.62□□□□□ -1.03
TRIM48-201ENST00000417545 FBRSL1Q9HCM7 1045 aaKnown RBP8.62□□□□□ -1.03
TRIM48-201ENST00000417545 POLMQ9NP87 494 aaPredicted RBP8.62□□□□□ -1.03
TRIM48-201ENST00000417545 ZDHHC4Q9NPG8 344 aa8.62□□□□□ -1.03
TRIM48-201ENST00000417545 RBM22Q9NW64 420 aaKnown RBP eCLIP8.62□□□□□ -1.03
TRIM48-201ENST00000417545 CACNA2D2Q9NY47 1150 aa8.62□□□□□ -1.03
TRIM48-201ENST00000417545 GOLGA6AQ9NYA3 693 aa8.62□□□□□ -1.03
TRIM48-201ENST00000417545 BCCIPQ9P287 314 aaKnown RBP eCLIP8.62□□□□□ -1.03
TRIM48-201ENST00000417545 RSPH14Q9UHP6 348 aa8.62□□□□□ -1.03
TRIM48-201ENST00000417545 FEZ2Q9UHY8 353 aaPredicted RBP8.62□□□□□ -1.03
TRIM48-201ENST00000417545 DNPEPQ9ULA0 475 aa8.62□□□□□ -1.03
TRIM48-201ENST00000417545 TTC7AQ9ULT0 858 aaPredicted RBP8.62□□□□□ -1.03
TRIM48-201ENST00000417545 R3HDM2Q9Y2K5 976 aaKnown RBP8.62□□□□□ -1.03
TRIM48-201ENST00000417545 SIT1Q9Y3P8 196 aa8.62□□□□□ -1.03
TRIM48-201ENST00000417545 OR51B4Q9Y5P0 310 aa8.62□□□□□ -1.03
TRIM48-201ENST00000417545 STON1Q9Y6Q2 735 aa8.62□□□□□ -1.03
TRIM48-201ENST00000417545 BCLAF3A2AJT9 711 aaKnown RBP8.61□□□□□ -1.03
TRIM48-201ENST00000417545 CTAGE15A4D2H0 777 aa8.61□□□□□ -1.03
TRIM48-201ENST00000417545 TTC34A8MYJ7 566 aa8.61□□□□□ -1.03
TRIM48-201ENST00000417545 TNFRSF10AO00220 468 aa8.61□□□□□ -1.03
TRIM48-201ENST00000417545 JCHAINP01591 159 aa8.61□□□□□ -1.03
TRIM48-201ENST00000417545 CTAGE8P0CG41 777 aa8.61□□□□□ -1.03
TRIM48-201ENST00000417545 HLA-EP13747 358 aa8.61□□□□□ -1.03
TRIM48-201ENST00000417545 CA4P22748 312 aa8.61□□□□□ -1.03
TRIM48-201ENST00000417545 CHRNA3P32297 505 aa8.61□□□□□ -1.03
TRIM48-201ENST00000417545 MAGEA9P43362 315 aa8.61□□□□□ -1.03
TRIM48-201ENST00000417545 EMP3P54852 163 aa8.61□□□□□ -1.03
TRIM48-201ENST00000417545 C2orf54Q08AI8 447 aa8.61□□□□□ -1.03
TRIM48-201ENST00000417545 MESP2Q0VG99 397 aa8.61□□□□□ -1.03
TRIM48-201ENST00000417545 HNRNPDQ14103 355 aaKnown RBP8.61□□□□□ -1.03
TRIM48-201ENST00000417545 PRPSAP1Q14558 356 aa8.61□□□□□ -1.03
TRIM48-201ENST00000417545 PRKD1Q15139 912 aaPredicted RBP8.61□□□□□ -1.03
TRIM48-201ENST00000417545 INO80DQ53TQ3 878 aaPredicted RBP8.61□□□□□ -1.03
TRIM48-201ENST00000417545 EMC10Q5UCC4 262 aa8.61□□□□□ -1.03
TRIM48-201ENST00000417545 TMEM215Q68D42 235 aa8.61□□□□□ -1.03
TRIM48-201ENST00000417545 Q6ZVU0 165 aa8.61□□□□□ -1.03
TRIM48-201ENST00000417545 PID1Q7Z2X4 250 aa8.61□□□□□ -1.03
TRIM48-201ENST00000417545 CTAGE6Q86UF2 777 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms