RNA–Protein interactions for RNA: ENST00000417033.1

MDC1-203, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-203ENST00000417033 CCNG2Q16589 344 aa8.22□□□□□ -1.09
MDC1-203ENST00000417033 TMEM196Q5HYL7 178 aa8.22□□□□□ -1.09
MDC1-203ENST00000417033 TJAP1Q5JTD0 557 aa8.22□□□□□ -1.09
MDC1-203ENST00000417033 DGKKQ5KSL6 1271 aa8.22□□□□□ -1.09
MDC1-203ENST00000417033 ATXN7L2Q5T6C5 722 aaPredicted RBP8.22□□□□□ -1.09
MDC1-203ENST00000417033 DARS2Q6PI48 645 aaKnown RBP8.22□□□□□ -1.09
MDC1-203ENST00000417033 ZNF783Q6ZMS7 281 aa8.22□□□□□ -1.09
MDC1-203ENST00000417033 Q6ZS52 159 aa8.22□□□□□ -1.09
MDC1-203ENST00000417033 ZNF572Q7Z3I7 529 aaPredicted RBP8.22□□□□□ -1.09
MDC1-203ENST00000417033 RALGPS2Q86X27 583 aaPredicted RBP8.22□□□□□ -1.09
MDC1-203ENST00000417033 CDKL3Q8IVW4 592 aaPredicted RBP8.22□□□□□ -1.09
MDC1-203ENST00000417033 CCDC117Q8IWD4 279 aaPredicted RBP8.22□□□□□ -1.09
MDC1-203ENST00000417033 CCDC13Q8IYE1 715 aa8.22□□□□□ -1.09
MDC1-203ENST00000417033 AHI1Q8N157 1196 aa8.22□□□□□ -1.09
MDC1-203ENST00000417033 SIX5Q8N196 739 aa8.22□□□□□ -1.09
MDC1-203ENST00000417033 PGBD5Q8N414 524 aa8.22□□□□□ -1.09
MDC1-203ENST00000417033 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.22□□□□□ -1.09
MDC1-203ENST00000417033 CNTD1Q8N815 330 aa8.22□□□□□ -1.09
MDC1-203ENST00000417033 FAM71DQ8N9W8 422 aa8.22□□□□□ -1.09
MDC1-203ENST00000417033 C12orf50Q8NA57 414 aaPredicted RBP8.22□□□□□ -1.09
MDC1-203ENST00000417033 NOA1Q8NC60 698 aaKnown RBP8.22□□□□□ -1.09
MDC1-203ENST00000417033 CCDC110Q8TBZ0 833 aa8.22□□□□□ -1.09
MDC1-203ENST00000417033 WFIKKN2Q8TEU8 576 aa8.22□□□□□ -1.09
MDC1-203ENST00000417033 TFB1MQ8WVM0 346 aaKnown RBP8.22□□□□□ -1.09
MDC1-203ENST00000417033 FAM3CQ92520 227 aa8.22□□□□□ -1.09
MDC1-203ENST00000417033 MAML1Q92585 1016 aa8.22□□□□□ -1.09
MDC1-203ENST00000417033 TTC17Q96AE7 1141 aa8.22□□□□□ -1.09
MDC1-203ENST00000417033 EXOC2Q96KP1 924 aa8.22□□□□□ -1.09
MDC1-203ENST00000417033 CCDC114Q96M63 670 aa8.22□□□□□ -1.09
MDC1-203ENST00000417033 TSGA13Q96PP4 275 aa8.22□□□□□ -1.09
MDC1-203ENST00000417033 UHRF1Q96T88 793 aaPredicted RBP8.22□□□□□ -1.09
MDC1-203ENST00000417033 KRT12Q99456 494 aa8.22□□□□□ -1.09
MDC1-203ENST00000417033 TRIM51Q9BSJ1 452 aa8.22□□□□□ -1.09
MDC1-203ENST00000417033 FOXQ1Q9C009 403 aa8.22□□□□□ -1.09
MDC1-203ENST00000417033 TNKS2Q9H2K2 1166 aa8.22□□□□□ -1.09
MDC1-203ENST00000417033 RETREG1Q9H6L5 497 aa8.22□□□□□ -1.09
MDC1-203ENST00000417033 C8orf33Q9H7E9 229 aaPredicted RBP8.22□□□□□ -1.09
MDC1-203ENST00000417033 PRDM16Q9HAZ2 1276 aa8.22□□□□□ -1.09
MDC1-203ENST00000417033 ELOVL2Q9NXB9 296 aa8.22□□□□□ -1.09
MDC1-203ENST00000417033 CACNA2D2Q9NY47 1150 aa8.22□□□□□ -1.09
MDC1-203ENST00000417033 LHX3Q9UBR4 397 aa8.22□□□□□ -1.09
MDC1-203ENST00000417033 UBA2Q9UBT2 640 aaPredicted RBP8.22□□□□□ -1.09
MDC1-203ENST00000417033 FBXL21Q9UKT6 434 aa8.22□□□□□ -1.09
MDC1-203ENST00000417033 ERVW-1Q9UQF0 538 aa8.22□□□□□ -1.09
MDC1-203ENST00000417033 SHROOM3Q8TF72 1996 aa8.22□□□□□ -1.09
MDC1-203ENST00000417033 EYSQ5T1H1 3165 aa8.22□□□□□ -1.09
MDC1-203ENST00000417033 BCLAF3A2AJT9 711 aaKnown RBP8.21□□□□□ -1.1
MDC1-203ENST00000417033 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.21□□□□□ -1.1
MDC1-203ENST00000417033 WASH3PC4AMC7 463 aa8.21□□□□□ -1.1
MDC1-203ENST00000417033 ZNF821O75541 412 aaPredicted RBP8.21□□□□□ -1.1
MDC1-203ENST00000417033 IFNB1P01574 187 aa8.21□□□□□ -1.1
MDC1-203ENST00000417033 JCHAINP01591 159 aa8.21□□□□□ -1.1
MDC1-203ENST00000417033 SRCP12931 536 aa8.21□□□□□ -1.1
MDC1-203ENST00000417033 POLR2EP19388 210 aaKnown RBP8.21□□□□□ -1.1
MDC1-203ENST00000417033 PRKCHP24723 683 aa8.21□□□□□ -1.1
MDC1-203ENST00000417033 GKP32189 559 aa8.21□□□□□ -1.1
MDC1-203ENST00000417033 CD68P34810 354 aaPredicted RBP8.21□□□□□ -1.1
MDC1-203ENST00000417033 GRIA2P42262 883 aa8.21□□□□□ -1.1
MDC1-203ENST00000417033 IL12RB1P42701 662 aa8.21□□□□□ -1.1
MDC1-203ENST00000417033 PTGIRP43119 386 aa8.21□□□□□ -1.1
MDC1-203ENST00000417033 KIR2DL1P43626 348 aaPredicted RBP8.21□□□□□ -1.1
MDC1-203ENST00000417033 VPS41P49754 854 aa8.21□□□□□ -1.1
MDC1-203ENST00000417033 SERPINH1P50454 418 aaKnown RBP8.21□□□□□ -1.1
MDC1-203ENST00000417033 TERF1P54274 439 aa8.21□□□□□ -1.1
MDC1-203ENST00000417033 ZXDAP98168 799 aa8.21□□□□□ -1.1
MDC1-203ENST00000417033 DSC2Q02487 901 aa8.21□□□□□ -1.1
MDC1-203ENST00000417033 CKAP4Q07065 602 aaKnown RBP8.21□□□□□ -1.1
MDC1-203ENST00000417033 XRCC4Q13426 336 aa8.21□□□□□ -1.1
MDC1-203ENST00000417033 SLC12A1Q13621 1099 aa8.21□□□□□ -1.1
MDC1-203ENST00000417033 BYSLQ13895 437 aaKnown RBP8.21□□□□□ -1.1
MDC1-203ENST00000417033 DMC1Q14565 340 aa8.21□□□□□ -1.1
MDC1-203ENST00000417033 ZNF234Q14588 700 aa8.21□□□□□ -1.1
MDC1-203ENST00000417033 LBRQ14739 615 aaKnown RBP8.21□□□□□ -1.1
MDC1-203ENST00000417033 FAXCQ5TGI0 409 aa8.21□□□□□ -1.1
MDC1-203ENST00000417033 TMCO4Q5TGY1 634 aa8.21□□□□□ -1.1
MDC1-203ENST00000417033 C22orf39Q6P5X5 142 aa8.21□□□□□ -1.1
MDC1-203ENST00000417033 CCDC137Q6PK04 289 aaKnown RBP8.21□□□□□ -1.1
MDC1-203ENST00000417033 ZNF567Q8N184 647 aa8.21□□□□□ -1.1
MDC1-203ENST00000417033 TSEN2Q8NCE0 465 aaKnown RBP8.21□□□□□ -1.1
MDC1-203ENST00000417033 OR6K2Q8NGY2 324 aa8.21□□□□□ -1.1
MDC1-203ENST00000417033 MAIP1Q8WWC4 291 aa8.21□□□□□ -1.1
MDC1-203ENST00000417033 HTR3CQ8WXA8 447 aa8.21□□□□□ -1.1
MDC1-203ENST00000417033 VOPP1Q96AW1 172 aa8.21□□□□□ -1.1
MDC1-203ENST00000417033 NAP1L3Q99457 506 aaPredicted RBP8.21□□□□□ -1.1
MDC1-203ENST00000417033 HINFPQ9BQA5 517 aa8.21□□□□□ -1.1
MDC1-203ENST00000417033 GORASP1Q9BQQ3 440 aa8.21□□□□□ -1.1
MDC1-203ENST00000417033 C2orf49Q9BVC5 232 aaPredicted RBP8.21□□□□□ -1.1
MDC1-203ENST00000417033 TM6SF2Q9BZW4 377 aa8.21□□□□□ -1.1
MDC1-203ENST00000417033 NT5MQ9NPB1 228 aa8.21□□□□□ -1.1
MDC1-203ENST00000417033 AMACRQ9UHK6 382 aa8.21□□□□□ -1.1
MDC1-203ENST00000417033 ZNF148Q9UQR1 794 aa8.21□□□□□ -1.1
MDC1-203ENST00000417033 NEU2Q9Y3R4 380 aa8.21□□□□□ -1.1
MDC1-203ENST00000417033 RAD54BQ9Y620 910 aa8.21□□□□□ -1.1
MDC1-203ENST00000417033 ATG2BQ96BY7 2078 aa8.21□□□□□ -1.1
MDC1-203ENST00000417033 A0A0A0MRY4 1105 aa8.2□□□□□ -1.1
MDC1-203ENST00000417033 GOLGA6L10A0A0M3HER8 536 aa8.2□□□□□ -1.1
MDC1-203ENST00000417033 ZSCAN5CA6NGD5 496 aaPredicted RBP8.2□□□□□ -1.1
MDC1-203ENST00000417033 HACD1B0YJ81 288 aa8.2□□□□□ -1.1
MDC1-203ENST00000417033 SGK1O00141 431 aa8.2□□□□□ -1.1
MDC1-203ENST00000417033 MATN3O15232 486 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms